RNA–Protein interactions for RNA: ENST00000339251.9

MUC4-202, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-202ENST00000339251 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
MUC4-202ENST00000339251 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
MUC4-202ENST00000339251 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
MUC4-202ENST00000339251 HRCP23327 699 aa18.93■□□□□ 0.62
MUC4-202ENST00000339251 PCGF6Q9BYE7 350 aa18.91■□□□□ 0.62
MUC4-202ENST00000339251 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
MUC4-202ENST00000339251 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
MUC4-202ENST00000339251 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
MUC4-202ENST00000339251 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
MUC4-202ENST00000339251 LOC105371045A0A1W2PR82 267 aa18.35■□□□□ 0.53
MUC4-202ENST00000339251 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
MUC4-202ENST00000339251 TRIM26Q12899 539 aaPredicted RBP18.24■□□□□ 0.51
MUC4-202ENST00000339251 ABCC9O60706 1549 aa18.23■□□□□ 0.51
MUC4-202ENST00000339251 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
MUC4-202ENST00000339251 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
MUC4-202ENST00000339251 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
MUC4-202ENST00000339251 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
MUC4-202ENST00000339251 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
MUC4-202ENST00000339251 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
MUC4-202ENST00000339251 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
MUC4-202ENST00000339251 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
MUC4-202ENST00000339251 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
MUC4-202ENST00000339251 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
MUC4-202ENST00000339251 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
MUC4-202ENST00000339251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
MUC4-202ENST00000339251 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
MUC4-202ENST00000339251 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
MUC4-202ENST00000339251 GTF3C3Q9Y5Q9 886 aa17.46■□□□□ 0.39
MUC4-202ENST00000339251 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
MUC4-202ENST00000339251 MYT1Q01538 1121 aa17.41■□□□□ 0.38
MUC4-202ENST00000339251 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
MUC4-202ENST00000339251 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.38
MUC4-202ENST00000339251 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
MUC4-202ENST00000339251 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
MUC4-202ENST00000339251 NACADO15069 1562 aa17.25■□□□□ 0.35
MUC4-202ENST00000339251 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
MUC4-202ENST00000339251 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
MUC4-202ENST00000339251 ZNF316A6NFI3 1004 aaPredicted RBP17.13■□□□□ 0.33
MUC4-202ENST00000339251 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
MUC4-202ENST00000339251 APLP2Q06481 763 aa17.05■□□□□ 0.32
MUC4-202ENST00000339251 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
MUC4-202ENST00000339251 MIER1Q8N108 512 aa16.93■□□□□ 0.3
MUC4-202ENST00000339251 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
MUC4-202ENST00000339251 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
MUC4-202ENST00000339251 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
MUC4-202ENST00000339251 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
MUC4-202ENST00000339251 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
MUC4-202ENST00000339251 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
MUC4-202ENST00000339251 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
MUC4-202ENST00000339251 WIZO95785 1651 aa16.72■□□□□ 0.27
MUC4-202ENST00000339251 SOGA1O94964 1423 aa16.68■□□□□ 0.26
MUC4-202ENST00000339251 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
MUC4-202ENST00000339251 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
MUC4-202ENST00000339251 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
MUC4-202ENST00000339251 ITGAEP38570 1179 aa16.59■□□□□ 0.25
MUC4-202ENST00000339251 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
MUC4-202ENST00000339251 EEA1Q15075 1411 aa16.58■□□□□ 0.24
MUC4-202ENST00000339251 BCANQ96GW7 911 aa16.57■□□□□ 0.24
MUC4-202ENST00000339251 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
MUC4-202ENST00000339251 SUPT16HQ9Y5B9 1047 aaKnown RBP16.54■□□□□ 0.24
MUC4-202ENST00000339251 CLIP1P30622 1438 aa16.54■□□□□ 0.24
MUC4-202ENST00000339251 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
MUC4-202ENST00000339251 NEFLP07196 543 aa16.52■□□□□ 0.24
MUC4-202ENST00000339251 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
MUC4-202ENST00000339251 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
MUC4-202ENST00000339251 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
MUC4-202ENST00000339251 ANP32EQ9BTT0 268 aa16.4■□□□□ 0.22
MUC4-202ENST00000339251 FKBP8Q14318 412 aa16.39■□□□□ 0.21
MUC4-202ENST00000339251 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
MUC4-202ENST00000339251 TSHZ2Q9NRE2 1034 aa16.37■□□□□ 0.21
MUC4-202ENST00000339251 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
MUC4-202ENST00000339251 SMARCA4P51532 1647 aa16.36■□□□□ 0.21
MUC4-202ENST00000339251 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
MUC4-202ENST00000339251 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
MUC4-202ENST00000339251 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.21
MUC4-202ENST00000339251 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
MUC4-202ENST00000339251 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
MUC4-202ENST00000339251 DHX57Q6P158 1386 aaKnown RBP16.26■□□□□ 0.19
MUC4-202ENST00000339251 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
MUC4-202ENST00000339251 FAM50AQ14320 339 aaKnown RBP16.23■□□□□ 0.19
MUC4-202ENST00000339251 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
MUC4-202ENST00000339251 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
MUC4-202ENST00000339251 KANK4Q5T7N3 995 aaPredicted RBP16.23■□□□□ 0.19
MUC4-202ENST00000339251 ANP32CO43423 234 aa16.22■□□□□ 0.19
MUC4-202ENST00000339251 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
MUC4-202ENST00000339251 RAPGEF2Q9Y4G8 1499 aa16.21■□□□□ 0.18
MUC4-202ENST00000339251 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
MUC4-202ENST00000339251 BCL11AQ9H165 835 aa16.18■□□□□ 0.18
MUC4-202ENST00000339251 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
MUC4-202ENST00000339251 CCNB3Q8WWL7 1395 aa16.11■□□□□ 0.17
MUC4-202ENST00000339251 RBM19Q9Y4C8 960 aaKnown RBP16.1■□□□□ 0.17
MUC4-202ENST00000339251 SIN3AQ96ST3 1273 aa16.1■□□□□ 0.17
MUC4-202ENST00000339251 KIF21BO75037 1637 aa16.1■□□□□ 0.17
MUC4-202ENST00000339251 CDK11AQ9UQ88 783 aaPredicted RBP16.09■□□□□ 0.17
MUC4-202ENST00000339251 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
MUC4-202ENST00000339251 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
MUC4-202ENST00000339251 P3H3Q8IVL6 736 aa16.03■□□□□ 0.16
MUC4-202ENST00000339251 RAB3GAP2Q9H2M9 1393 aa16.03■□□□□ 0.16
MUC4-202ENST00000339251 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
MUC4-202ENST00000339251 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms