RNA–Protein interactions for RNA: ENST00000336890.9

LCK-202, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-202ENST00000336890 CCNB3Q8WWL7 1395 aa23.95■■□□□ 1.42
LCK-202ENST00000336890 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
LCK-202ENST00000336890 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
LCK-202ENST00000336890 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.42
LCK-202ENST00000336890 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
LCK-202ENST00000336890 IGF1RP08069 1367 aa23.83■■□□□ 1.41
LCK-202ENST00000336890 MRC2Q9UBG0 1479 aa23.83■■□□□ 1.41
LCK-202ENST00000336890 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
LCK-202ENST00000336890 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
LCK-202ENST00000336890 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
LCK-202ENST00000336890 WDR62O43379 1518 aa23.72■■□□□ 1.39
LCK-202ENST00000336890 CFAP43Q8NDM7 1665 aa23.72■■□□□ 1.39
LCK-202ENST00000336890 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
LCK-202ENST00000336890 CARMIL1Q5VZK9 1371 aa23.7■■□□□ 1.38
LCK-202ENST00000336890 RAB3GAP2Q9H2M9 1393 aa23.7■■□□□ 1.38
LCK-202ENST00000336890 ABCA5Q8WWZ7 1642 aa23.69■■□□□ 1.38
LCK-202ENST00000336890 LRRC9Q6ZRR7 1453 aa23.69■■□□□ 1.38
LCK-202ENST00000336890 MAPKBP1O60336 1514 aa23.68■■□□□ 1.38
LCK-202ENST00000336890 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
LCK-202ENST00000336890 CUL7Q14999 1698 aa23.64■■□□□ 1.38
LCK-202ENST00000336890 ERCC6Q03468 1493 aa23.64■■□□□ 1.37
LCK-202ENST00000336890 TIMELESSQ9UNS1 1208 aa23.63■■□□□ 1.37
LCK-202ENST00000336890 SUPT16HQ9Y5B9 1047 aaKnown RBP23.62■■□□□ 1.37
LCK-202ENST00000336890 GAPVD1Q14C86 1478 aa23.61■■□□□ 1.37
LCK-202ENST00000336890 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
LCK-202ENST00000336890 TDRD9Q8NDG6 1382 aaKnown RBP23.59■■□□□ 1.37
LCK-202ENST00000336890 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.37
LCK-202ENST00000336890 IFT140Q96RY7 1462 aa23.58■■□□□ 1.36
LCK-202ENST00000336890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.36
LCK-202ENST00000336890 PCF11O94913 1555 aaKnown RBP23.54■■□□□ 1.36
LCK-202ENST00000336890 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
LCK-202ENST00000336890 ITGAEP38570 1179 aa23.53■■□□□ 1.36
LCK-202ENST00000336890 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
LCK-202ENST00000336890 PHLDB1Q86UU1 1377 aa23.51■■□□□ 1.35
LCK-202ENST00000336890 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
LCK-202ENST00000336890 CASKIN1Q8WXD9 1431 aa23.45■■□□□ 1.34
LCK-202ENST00000336890 CTTNBP2Q8WZ74 1663 aa23.44■■□□□ 1.34
LCK-202ENST00000336890 GRIN2BQ13224 1484 aa23.42■■□□□ 1.34
LCK-202ENST00000336890 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
LCK-202ENST00000336890 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
LCK-202ENST00000336890 FMN1Q68DA7 1419 aa23.37■■□□□ 1.33
LCK-202ENST00000336890 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
LCK-202ENST00000336890 CCER2I3L3R5 266 aa23.34■■□□□ 1.33
LCK-202ENST00000336890 EIF4G3O43432 1585 aaKnown RBP23.33■■□□□ 1.33
LCK-202ENST00000336890 FHOD3Q2V2M9 1422 aa23.31■■□□□ 1.32
LCK-202ENST00000336890 FGD6Q6ZV73 1430 aa23.3■■□□□ 1.32
LCK-202ENST00000336890 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
LCK-202ENST00000336890 DDX10Q13206 875 aaKnown RBP23.27■■□□□ 1.32
LCK-202ENST00000336890 TSHZ2Q9NRE2 1034 aa23.27■■□□□ 1.32
LCK-202ENST00000336890 SIN3AQ96ST3 1273 aa23.26■■□□□ 1.31
LCK-202ENST00000336890 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
LCK-202ENST00000336890 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
LCK-202ENST00000336890 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
LCK-202ENST00000336890 UACAQ9BZF9 1416 aa23.24■■□□□ 1.31
LCK-202ENST00000336890 ANP32CO43423 234 aa23.24■■□□□ 1.31
LCK-202ENST00000336890 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
LCK-202ENST00000336890 TONSLQ96HA7 1378 aa23.23■■□□□ 1.31
LCK-202ENST00000336890 NEFLP07196 543 aa23.23■■□□□ 1.31
LCK-202ENST00000336890 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
LCK-202ENST00000336890 PTPN23Q9H3S7 1636 aa23.21■■□□□ 1.31
LCK-202ENST00000336890 ATP1B4Q9UN42 357 aaPredicted RBP23.2■■□□□ 1.3
LCK-202ENST00000336890 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
LCK-202ENST00000336890 MTUS2Q5JR59 1369 aa23.19■■□□□ 1.3
LCK-202ENST00000336890 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
LCK-202ENST00000336890 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
LCK-202ENST00000336890 EHBP1L1Q8N3D4 1523 aa23.17■■□□□ 1.3
LCK-202ENST00000336890 GRIN2AQ12879 1464 aa23.14■■□□□ 1.3
LCK-202ENST00000336890 MYOM3Q5VTT5 1437 aa23.14■■□□□ 1.29
LCK-202ENST00000336890 SYNJ2O15056 1496 aa23.13■■□□□ 1.29
LCK-202ENST00000336890 IQGAP2Q13576 1575 aa23.12■■□□□ 1.29
LCK-202ENST00000336890 FKBP8Q14318 412 aa23.12■■□□□ 1.29
LCK-202ENST00000336890 NCOA2Q15596 1464 aa23.1■■□□□ 1.29
LCK-202ENST00000336890 KIAA0586Q9BVV6 1533 aa23.08■■□□□ 1.29
LCK-202ENST00000336890 NAIPQ13075 1403 aa23.08■■□□□ 1.29
LCK-202ENST00000336890 LRRIQ1Q96JM4 1722 aa23.08■■□□□ 1.29
LCK-202ENST00000336890 ANP32EQ9BTT0 268 aa23.07■■□□□ 1.28
LCK-202ENST00000336890 GCC2Q8IWJ2 1684 aa23.06■■□□□ 1.28
LCK-202ENST00000336890 UGGT2Q9NYU1 1516 aa23.06■■□□□ 1.28
LCK-202ENST00000336890 AKNAQ7Z591 1439 aa23.05■■□□□ 1.28
LCK-202ENST00000336890 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
LCK-202ENST00000336890 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
LCK-202ENST00000336890 PTPRKQ15262 1439 aa23.02■■□□□ 1.28
LCK-202ENST00000336890 TCOF1Q13428 1488 aaKnown RBP23.01■■□□□ 1.27
LCK-202ENST00000336890 NUP160Q12769 1436 aa23■■□□□ 1.27
LCK-202ENST00000336890 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
LCK-202ENST00000336890 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
LCK-202ENST00000336890 BCANQ96GW7 911 aa22.97■■□□□ 1.27
LCK-202ENST00000336890 KDM5BQ9UGL1 1544 aa22.97■■□□□ 1.27
LCK-202ENST00000336890 TRIM52Q96A61 297 aa22.93■■□□□ 1.26
LCK-202ENST00000336890 HIRIP3Q9BW71 556 aaPredicted RBP22.92■■□□□ 1.26
LCK-202ENST00000336890 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
LCK-202ENST00000336890 DISP1Q96F81 1524 aa22.9■■□□□ 1.26
LCK-202ENST00000336890 KIAA0556O60303 1618 aa22.89■■□□□ 1.25
LCK-202ENST00000336890 ERICH6BQ5W0A0 696 aa22.88■■□□□ 1.25
LCK-202ENST00000336890 FBLN2P98095 1184 aa22.85■■□□□ 1.25
LCK-202ENST00000336890 MAGI3Q5TCQ9 1506 aa22.83■■□□□ 1.25
LCK-202ENST00000336890 RBM19Q9Y4C8 960 aaKnown RBP22.82■■□□□ 1.24
LCK-202ENST00000336890 EIF4G2P78344 907 aaKnown RBP eCLIP22.81■■□□□ 1.24
LCK-202ENST00000336890 CNTLNQ9NXG0 1405 aa22.81■■□□□ 1.24
LCK-202ENST00000336890 EPRSP07814 1512 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms