RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 CFAP43Q8NDM7 1665 aa28.9■■■□□ 2.22
CDCA4-201ENST00000336219 DNMBPQ6XZF7 1577 aa28.9■■■□□ 2.22
CDCA4-201ENST00000336219 SUPT16HQ9Y5B9 1047 aaKnown RBP28.89■■■□□ 2.22
CDCA4-201ENST00000336219 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
CDCA4-201ENST00000336219 PCF11O94913 1555 aaKnown RBP28.86■■■□□ 2.21
CDCA4-201ENST00000336219 ABCA10Q8WWZ4 1543 aa28.85■■■□□ 2.21
CDCA4-201ENST00000336219 PHLDB1Q86UU1 1377 aa28.82■■■□□ 2.2
CDCA4-201ENST00000336219 MAPKBP1O60336 1514 aa28.82■■■□□ 2.2
CDCA4-201ENST00000336219 RAD54L2Q9Y4B4 1467 aa28.82■■■□□ 2.2
CDCA4-201ENST00000336219 TOPBP1Q92547 1522 aa28.81■■■□□ 2.2
CDCA4-201ENST00000336219 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
CDCA4-201ENST00000336219 SETD5Q9C0A6 1442 aa28.78■■■□□ 2.2
CDCA4-201ENST00000336219 CUL7Q14999 1698 aa28.76■■■□□ 2.19
CDCA4-201ENST00000336219 EFCAB5A4FU69 1503 aa28.76■■■□□ 2.19
CDCA4-201ENST00000336219 P3H3Q8IVL6 736 aa28.73■■■□□ 2.19
CDCA4-201ENST00000336219 CTTNBP2Q8WZ74 1663 aa28.73■■■□□ 2.19
CDCA4-201ENST00000336219 KCNH8Q96L42 1107 aa28.73■■■□□ 2.19
CDCA4-201ENST00000336219 FHOD3Q2V2M9 1422 aa28.73■■■□□ 2.19
CDCA4-201ENST00000336219 FYCO1Q9BQS8 1478 aa28.72■■■□□ 2.19
CDCA4-201ENST00000336219 NESP48681 1621 aa28.71■■■□□ 2.19
CDCA4-201ENST00000336219 AQRO60306 1485 aaKnown RBP eCLIP28.68■■■□□ 2.185e-6■■□□□ 14.3
CDCA4-201ENST00000336219 CASKIN1Q8WXD9 1431 aa28.67■■■□□ 2.18
CDCA4-201ENST00000336219 FAM50AQ14320 339 aaKnown RBP28.66■■■□□ 2.18
CDCA4-201ENST00000336219 WDR97A6NE52 1622 aa28.64■■■□□ 2.18
CDCA4-201ENST00000336219 ATP1B4Q9UN42 357 aaPredicted RBP28.63■■■□□ 2.17
CDCA4-201ENST00000336219 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
CDCA4-201ENST00000336219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.58■■■□□ 2.17
CDCA4-201ENST00000336219 TSHZ2Q9NRE2 1034 aa28.56■■■□□ 2.16
CDCA4-201ENST00000336219 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
CDCA4-201ENST00000336219 FMN1Q68DA7 1419 aa28.55■■■□□ 2.16
CDCA4-201ENST00000336219 SNAPC4Q5SXM2 1469 aa28.52■■■□□ 2.16
CDCA4-201ENST00000336219 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
CDCA4-201ENST00000336219 SIN3AQ96ST3 1273 aa28.49■■■□□ 2.15
CDCA4-201ENST00000336219 SAMD9Q5K651 1589 aa28.48■■■□□ 2.15
CDCA4-201ENST00000336219 BCANQ96GW7 911 aa28.46■■■□□ 2.15
CDCA4-201ENST00000336219 FGD6Q6ZV73 1430 aa28.45■■■□□ 2.15
CDCA4-201ENST00000336219 DDX10Q13206 875 aaKnown RBP28.44■■■□□ 2.14
CDCA4-201ENST00000336219 TIMELESSQ9UNS1 1208 aa28.44■■■□□ 2.14
CDCA4-201ENST00000336219 LRRIQ1Q96JM4 1722 aa28.43■■■□□ 2.14
CDCA4-201ENST00000336219 TDRD9Q8NDG6 1382 aaKnown RBP28.42■■■□□ 2.14
CDCA4-201ENST00000336219 GAPVD1Q14C86 1478 aa28.42■■■□□ 2.14
CDCA4-201ENST00000336219 MTUS2Q5JR59 1369 aa28.38■■■□□ 2.13
CDCA4-201ENST00000336219 HIRIP3Q9BW71 556 aaPredicted RBP28.36■■■□□ 2.13
CDCA4-201ENST00000336219 GRIN2BQ13224 1484 aa28.35■■■□□ 2.13
CDCA4-201ENST00000336219 THOC2Q8NI27 1593 aaKnown RBP28.34■■■□□ 2.13
CDCA4-201ENST00000336219 PDS5BQ9NTI5 1447 aa28.34■■■□□ 2.13
CDCA4-201ENST00000336219 CCDC18Q5T9S5 1454 aa28.31■■■□□ 2.12
CDCA4-201ENST00000336219 FKBP8Q14318 412 aa28.31■■■□□ 2.12
CDCA4-201ENST00000336219 HFM1A2PYH4 1435 aa28.3■■■□□ 2.12
CDCA4-201ENST00000336219 KIF21AQ7Z4S6 1674 aa28.3■■■□□ 2.12
CDCA4-201ENST00000336219 NCOA2Q15596 1464 aa28.29■■■□□ 2.12
CDCA4-201ENST00000336219 PPP1R15AO75807 674 aaPredicted RBP28.29■■■□□ 2.12
CDCA4-201ENST00000336219 PTPRKQ15262 1439 aa28.29■■■□□ 2.12
CDCA4-201ENST00000336219 SUPT6HQ7KZ85 1726 aaKnown RBP28.29■■■□□ 2.12
CDCA4-201ENST00000336219 PTPN23Q9H3S7 1636 aa28.28■■■□□ 2.12
CDCA4-201ENST00000336219 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
CDCA4-201ENST00000336219 EHBP1L1Q8N3D4 1523 aa28.26■■■□□ 2.12
CDCA4-201ENST00000336219 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
CDCA4-201ENST00000336219 UACAQ9BZF9 1416 aa28.24■■■□□ 2.11
CDCA4-201ENST00000336219 NAIPQ13075 1403 aa28.2■■■□□ 2.1
CDCA4-201ENST00000336219 UGGT2Q9NYU1 1516 aa28.19■■■□□ 2.1
CDCA4-201ENST00000336219 ANP32EQ9BTT0 268 aa28.19■■■□□ 2.1
CDCA4-201ENST00000336219 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
CDCA4-201ENST00000336219 TRIM52Q96A61 297 aa28.18■■■□□ 2.1
CDCA4-201ENST00000336219 TONSLQ96HA7 1378 aa28.16■■■□□ 2.1
CDCA4-201ENST00000336219 MAGI3Q5TCQ9 1506 aa28.16■■■□□ 2.1
CDCA4-201ENST00000336219 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
CDCA4-201ENST00000336219 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
CDCA4-201ENST00000336219 HECW1Q76N89 1606 aa28.1■■■□□ 2.09
CDCA4-201ENST00000336219 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
CDCA4-201ENST00000336219 TCOF1Q13428 1488 aaKnown RBP28.07■■■□□ 2.08
CDCA4-201ENST00000336219 GCC2Q8IWJ2 1684 aa28.05■■■□□ 2.08
CDCA4-201ENST00000336219 ADAMTS12P58397 1594 aa28.05■■■□□ 2.08
CDCA4-201ENST00000336219 ANP32CO43423 234 aa28.05■■■□□ 2.08
CDCA4-201ENST00000336219 CCER2I3L3R5 266 aa28.01■■■□□ 2.08
CDCA4-201ENST00000336219 EPRSP07814 1512 aaKnown RBP28.01■■■□□ 2.07
CDCA4-201ENST00000336219 KDM5BQ9UGL1 1544 aa28.01■■■□□ 2.07
CDCA4-201ENST00000336219 NEFLP07196 543 aa28.01■■■□□ 2.07
CDCA4-201ENST00000336219 AKNAQ7Z591 1439 aa27.97■■■□□ 2.07
CDCA4-201ENST00000336219 WDR62O43379 1518 aa27.96■■■□□ 2.07
CDCA4-201ENST00000336219 RBM19Q9Y4C8 960 aaKnown RBP27.95■■■□□ 2.06
CDCA4-201ENST00000336219 CDK13Q14004 1512 aaKnown RBP27.94■■■□□ 2.06
CDCA4-201ENST00000336219 RRP7BPQ9NSQ0 103 aa27.94■■■□□ 2.06
CDCA4-201ENST00000336219 MIA2Q96PC5 1412 aa27.93■■■□□ 2.06
CDCA4-201ENST00000336219 DENND4BO75064 1496 aaPredicted RBP27.92■■■□□ 2.06
CDCA4-201ENST00000336219 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
CDCA4-201ENST00000336219 KDM6BO15054 1643 aa27.9■■■□□ 2.06
CDCA4-201ENST00000336219 CHIC2Q9UKJ5 165 aa27.9■■■□□ 2.06
CDCA4-201ENST00000336219 IRX6P78412 446 aaPredicted RBP27.78■■■□□ 2.04
CDCA4-201ENST00000336219 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
CDCA4-201ENST00000336219 IFT140Q96RY7 1462 aa27.77■■■□□ 2.04
CDCA4-201ENST00000336219 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
CDCA4-201ENST00000336219 ARID3CA6NKF2 412 aa27.77■■■□□ 2.04
CDCA4-201ENST00000336219 MPHOSPH9Q99550 1183 aa27.76■■■□□ 2.03
CDCA4-201ENST00000336219 DISP1Q96F81 1524 aa27.75■■■□□ 2.03
CDCA4-201ENST00000336219 KIAA0586Q9BVV6 1533 aa27.75■■■□□ 2.03
CDCA4-201ENST00000336219 HNRNPUQ00839 825 aaKnown RBP eCLIP27.75■■■□□ 2.03
CDCA4-201ENST00000336219 DAPK1P53355 1430 aa27.73■■■□□ 2.03
CDCA4-201ENST00000336219 DNMT1P26358 1616 aaKnown RBP27.72■■■□□ 2.03
CDCA4-201ENST00000336219 HSPA5P11021 654 aaKnown RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms