RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
SF1-202ENST00000334944 ANP32EQ9BTT0 268 aa20.31■□□□□ 0.84
SF1-202ENST00000334944 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
SF1-202ENST00000334944 DHX57Q6P158 1386 aaKnown RBP20.3■□□□□ 0.84
SF1-202ENST00000334944 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
SF1-202ENST00000334944 FHOD3Q2V2M9 1422 aa20.3■□□□□ 0.84
SF1-202ENST00000334944 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
SF1-202ENST00000334944 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.83
SF1-202ENST00000334944 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
SF1-202ENST00000334944 ABCA10Q8WWZ4 1543 aa20.25■□□□□ 0.83
SF1-202ENST00000334944 PHLDB1Q86UU1 1377 aa20.21■□□□□ 0.83
SF1-202ENST00000334944 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
SF1-202ENST00000334944 TSHZ2Q9NRE2 1034 aa20.18■□□□□ 0.82
SF1-202ENST00000334944 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
SF1-202ENST00000334944 PCF11O94913 1555 aaKnown RBP20.17■□□□□ 0.82
SF1-202ENST00000334944 SUPT16HQ9Y5B9 1047 aaKnown RBP20.16■□□□□ 0.82
SF1-202ENST00000334944 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.82
SF1-202ENST00000334944 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
SF1-202ENST00000334944 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
SF1-202ENST00000334944 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
SF1-202ENST00000334944 ARID3CA6NKF2 412 aa20.09■□□□□ 0.81
SF1-202ENST00000334944 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
SF1-202ENST00000334944 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
SF1-202ENST00000334944 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
SF1-202ENST00000334944 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
SF1-202ENST00000334944 CUL7Q14999 1698 aa20.03■□□□□ 0.8
SF1-202ENST00000334944 PRKCSHP14314 528 aaPredicted RBP20.02■□□□□ 0.8
SF1-202ENST00000334944 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.791e-7■■■■■ 49.1
SF1-202ENST00000334944 MAP3K1Q13233 1512 aa20.01■□□□□ 0.79
SF1-202ENST00000334944 SETD5Q9C0A6 1442 aa20■□□□□ 0.79
SF1-202ENST00000334944 BCANQ96GW7 911 aa20■□□□□ 0.79
SF1-202ENST00000334944 CASKIN1Q8WXD9 1431 aa20■□□□□ 0.79
SF1-202ENST00000334944 CTTNBP2Q8WZ74 1663 aa19.99■□□□□ 0.79
SF1-202ENST00000334944 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
SF1-202ENST00000334944 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
SF1-202ENST00000334944 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
SF1-202ENST00000334944 FYCO1Q9BQS8 1478 aa19.98■□□□□ 0.79
SF1-202ENST00000334944 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
SF1-202ENST00000334944 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
SF1-202ENST00000334944 FMN1Q68DA7 1419 aa19.95■□□□□ 0.78
SF1-202ENST00000334944 MAPKBP1O60336 1514 aa19.94■□□□□ 0.78
SF1-202ENST00000334944 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
SF1-202ENST00000334944 HIRIP3Q9BW71 556 aaPredicted RBP19.91■□□□□ 0.78
SF1-202ENST00000334944 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
SF1-202ENST00000334944 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
SF1-202ENST00000334944 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
SF1-202ENST00000334944 ZNF608Q9ULD9 1512 aaPredicted RBP19.85■□□□□ 0.77
SF1-202ENST00000334944 PTPRKQ15262 1439 aa19.84■□□□□ 0.77
SF1-202ENST00000334944 LRRIQ1Q96JM4 1722 aa19.83■□□□□ 0.77
SF1-202ENST00000334944 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
SF1-202ENST00000334944 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
SF1-202ENST00000334944 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
SF1-202ENST00000334944 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
SF1-202ENST00000334944 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
SF1-202ENST00000334944 FBLN2P98095 1184 aa19.78■□□□□ 0.76
SF1-202ENST00000334944 KCNH8Q96L42 1107 aa19.77■□□□□ 0.76
SF1-202ENST00000334944 MAGI3Q5TCQ9 1506 aa19.77■□□□□ 0.75
SF1-202ENST00000334944 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
SF1-202ENST00000334944 DDX10Q13206 875 aaKnown RBP19.75■□□□□ 0.75
SF1-202ENST00000334944 MYOM3Q5VTT5 1437 aa19.74■□□□□ 0.75
SF1-202ENST00000334944 CDK13Q14004 1512 aaKnown RBP19.74■□□□□ 0.75
SF1-202ENST00000334944 CCDC18Q5T9S5 1454 aa19.72■□□□□ 0.75
SF1-202ENST00000334944 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
SF1-202ENST00000334944 ADAMTS12P58397 1594 aa19.71■□□□□ 0.75
SF1-202ENST00000334944 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
SF1-202ENST00000334944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.69■□□□□ 0.74
SF1-202ENST00000334944 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
SF1-202ENST00000334944 RBM19Q9Y4C8 960 aaKnown RBP19.67■□□□□ 0.74
SF1-202ENST00000334944 PPP1R15AO75807 674 aaPredicted RBP19.67■□□□□ 0.74
SF1-202ENST00000334944 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
SF1-202ENST00000334944 NAIPQ13075 1403 aa19.66■□□□□ 0.74
SF1-202ENST00000334944 FKBP8Q14318 412 aa19.66■□□□□ 0.74
SF1-202ENST00000334944 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
SF1-202ENST00000334944 EHBP1L1Q8N3D4 1523 aa19.65■□□□□ 0.74
SF1-202ENST00000334944 HFM1A2PYH4 1435 aa19.65■□□□□ 0.74
SF1-202ENST00000334944 TONSLQ96HA7 1378 aa19.65■□□□□ 0.74
SF1-202ENST00000334944 FOXD1Q16676 465 aa19.64■□□□□ 0.73
SF1-202ENST00000334944 CHMP7Q8WUX9 453 aaPredicted RBP19.64■□□□□ 0.73
SF1-202ENST00000334944 ZNF644Q9H582 1327 aaPredicted RBP19.63■□□□□ 0.73
SF1-202ENST00000334944 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
SF1-202ENST00000334944 PTPN23Q9H3S7 1636 aa19.63■□□□□ 0.73
SF1-202ENST00000334944 UGGT2Q9NYU1 1516 aa19.62■□□□□ 0.73
SF1-202ENST00000334944 THOC2Q8NI27 1593 aaKnown RBP19.61■□□□□ 0.73
SF1-202ENST00000334944 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
SF1-202ENST00000334944 MSH5O43196 834 aa19.59■□□□□ 0.73
SF1-202ENST00000334944 HECW1Q76N89 1606 aa19.59■□□□□ 0.73
SF1-202ENST00000334944 WDR62O43379 1518 aa19.57■□□□□ 0.72
SF1-202ENST00000334944 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
SF1-202ENST00000334944 DISP1Q96F81 1524 aa19.55■□□□□ 0.72
SF1-202ENST00000334944 ZNF777Q9ULD5 760 aaPredicted RBP19.55■□□□□ 0.72
SF1-202ENST00000334944 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
SF1-202ENST00000334944 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
SF1-202ENST00000334944 KIAA0586Q9BVV6 1533 aa19.53■□□□□ 0.72
SF1-202ENST00000334944 KDM6BO15054 1643 aa19.53■□□□□ 0.72
SF1-202ENST00000334944 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
SF1-202ENST00000334944 NUP153P49790 1475 aaKnown RBP19.5■□□□□ 0.71
SF1-202ENST00000334944 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
SF1-202ENST00000334944 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
SF1-202ENST00000334944 PLB1Q6P1J6 1458 aa19.49■□□□□ 0.71
SF1-202ENST00000334944 MPHOSPH9Q99550 1183 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms