RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 GTF3C3Q9Y5Q9 886 aa34.35■■■■□ 3.09
NDEL1-201ENST00000334527 FHAD1B1AJZ9 1412 aa34.34■■■■□ 3.09
NDEL1-201ENST00000334527 LRRC9Q6ZRR7 1453 aa34.34■■■■□ 3.09
NDEL1-201ENST00000334527 PCF11O94913 1555 aaKnown RBP34.28■■■■□ 3.08
NDEL1-201ENST00000334527 CFAP43Q8NDM7 1665 aa34.27■■■■□ 3.08
NDEL1-201ENST00000334527 P3H3Q8IVL6 736 aa34.27■■■■□ 3.08
NDEL1-201ENST00000334527 YTHDC1Q96MU7 727 aaKnown RBP34.27■■■■□ 3.08
NDEL1-201ENST00000334527 CUL7Q14999 1698 aa34.26■■■■□ 3.07
NDEL1-201ENST00000334527 PHLDB1Q86UU1 1377 aa34.21■■■■□ 3.07
NDEL1-201ENST00000334527 FHOD3Q2V2M9 1422 aa34.2■■■■□ 3.07
NDEL1-201ENST00000334527 RAB3GAP2Q9H2M9 1393 aa34.19■■■■□ 3.06
NDEL1-201ENST00000334527 EFCAB5A4FU69 1503 aa34.19■■■■□ 3.06
NDEL1-201ENST00000334527 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
NDEL1-201ENST00000334527 PELP1Q8IZL8 1130 aaKnown RBP34.18■■■■□ 3.06
NDEL1-201ENST00000334527 CTTNBP2Q8WZ74 1663 aa34.17■■■■□ 3.06
NDEL1-201ENST00000334527 ATP1B4Q9UN42 357 aaPredicted RBP34.15■■■■□ 3.06
NDEL1-201ENST00000334527 URB2Q14146 1524 aaKnown RBP34.14■■■■□ 3.06
NDEL1-201ENST00000334527 FYCO1Q9BQS8 1478 aa34.13■■■■□ 3.05
NDEL1-201ENST00000334527 WDR97A6NE52 1622 aa34.13■■■■□ 3.05
NDEL1-201ENST00000334527 SETD5Q9C0A6 1442 aa34.09■■■■□ 3.05
NDEL1-201ENST00000334527 CASKIN1Q8WXD9 1431 aa34.07■■■■□ 3.05
NDEL1-201ENST00000334527 FAM50AQ14320 339 aaKnown RBP34.07■■■■□ 3.04
NDEL1-201ENST00000334527 AQRO60306 1485 aaKnown RBP eCLIP34.07■■■■□ 3.046e-9■■■■□ 20
NDEL1-201ENST00000334527 MAPKBP1O60336 1514 aa34.05■■■■□ 3.04
NDEL1-201ENST00000334527 ABCA5Q8WWZ7 1642 aa34■■■■□ 3.03
NDEL1-201ENST00000334527 TDRD9Q8NDG6 1382 aaKnown RBP33.97■■■■□ 3.03
NDEL1-201ENST00000334527 FMN1Q68DA7 1419 aa33.96■■■■□ 3.03
NDEL1-201ENST00000334527 PDS5BQ9NTI5 1447 aa33.95■■■■□ 3.03
NDEL1-201ENST00000334527 GAPVD1Q14C86 1478 aa33.93■■■■□ 3.02
NDEL1-201ENST00000334527 SNAPC4Q5SXM2 1469 aa33.9■■■■□ 3.02
NDEL1-201ENST00000334527 SAMD9Q5K651 1589 aa33.87■■■■□ 3.01
NDEL1-201ENST00000334527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.86■■■■□ 3.014e-9■■■■■ 44.3
NDEL1-201ENST00000334527 KIF21AQ7Z4S6 1674 aa33.85■■■■□ 3.01
NDEL1-201ENST00000334527 DNAJC5BQ9UF47 199 aa33.83■■■■□ 3.01
NDEL1-201ENST00000334527 FGD6Q6ZV73 1430 aa33.78■■■■□ 3
NDEL1-201ENST00000334527 MTUS2Q5JR59 1369 aa33.77■■■■□ 3
NDEL1-201ENST00000334527 LRRIQ1Q96JM4 1722 aa33.75■■■□□ 2.99
NDEL1-201ENST00000334527 SIN3AQ96ST3 1273 aa33.74■■■□□ 2.99
NDEL1-201ENST00000334527 TARBP1Q13395 1621 aaKnown RBP33.73■■■□□ 2.99
NDEL1-201ENST00000334527 GRIN2BQ13224 1484 aa33.71■■■□□ 2.99
NDEL1-201ENST00000334527 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
NDEL1-201ENST00000334527 NCOA2Q15596 1464 aa33.62■■■□□ 2.97
NDEL1-201ENST00000334527 TIMELESSQ9UNS1 1208 aa33.61■■■□□ 2.97
NDEL1-201ENST00000334527 PBRM1Q86U86 1689 aa33.6■■■□□ 2.97
NDEL1-201ENST00000334527 SUPT6HQ7KZ85 1726 aaKnown RBP33.6■■■□□ 2.97
NDEL1-201ENST00000334527 MYOM3Q5VTT5 1437 aa33.58■■■□□ 2.97
NDEL1-201ENST00000334527 EHBP1L1Q8N3D4 1523 aa33.58■■■□□ 2.97
NDEL1-201ENST00000334527 PTPRKQ15262 1439 aa33.57■■■□□ 2.96
NDEL1-201ENST00000334527 CCDC18Q5T9S5 1454 aa33.56■■■□□ 2.96
NDEL1-201ENST00000334527 HFM1A2PYH4 1435 aa33.55■■■□□ 2.96
NDEL1-201ENST00000334527 PTPN23Q9H3S7 1636 aa33.52■■■□□ 2.96
NDEL1-201ENST00000334527 UGGT2Q9NYU1 1516 aa33.47■■■□□ 2.95
NDEL1-201ENST00000334527 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
NDEL1-201ENST00000334527 IQGAP2Q13576 1575 aa33.47■■■□□ 2.95
NDEL1-201ENST00000334527 MAGI3Q5TCQ9 1506 aa33.47■■■□□ 2.95
NDEL1-201ENST00000334527 PPP1R15AO75807 674 aaPredicted RBP33.46■■■□□ 2.95
NDEL1-201ENST00000334527 UACAQ9BZF9 1416 aa33.46■■■□□ 2.95
NDEL1-201ENST00000334527 ARHGEF11O15085 1522 aa33.44■■■□□ 2.94
NDEL1-201ENST00000334527 HECW1Q76N89 1606 aa33.44■■■□□ 2.94
NDEL1-201ENST00000334527 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
NDEL1-201ENST00000334527 NAIPQ13075 1403 aa33.44■■■□□ 2.94
NDEL1-201ENST00000334527 DDX10Q13206 875 aaKnown RBP33.38■■■□□ 2.93
NDEL1-201ENST00000334527 TONSLQ96HA7 1378 aa33.37■■■□□ 2.93
NDEL1-201ENST00000334527 EPRSP07814 1512 aaKnown RBP33.34■■■□□ 2.93
NDEL1-201ENST00000334527 KCNH8Q96L42 1107 aa33.32■■■□□ 2.92
NDEL1-201ENST00000334527 TCOF1Q13428 1488 aaKnown RBP33.31■■■□□ 2.92
NDEL1-201ENST00000334527 HIRIP3Q9BW71 556 aaPredicted RBP33.28■■■□□ 2.92
NDEL1-201ENST00000334527 CDK13Q14004 1512 aaKnown RBP33.28■■■□□ 2.92
NDEL1-201ENST00000334527 WDR62O43379 1518 aa33.28■■■□□ 2.92
NDEL1-201ENST00000334527 IFT140Q96RY7 1462 aa33.24■■■□□ 2.91
NDEL1-201ENST00000334527 ZNF608Q9ULD9 1512 aaPredicted RBP33.23■■■□□ 2.91
NDEL1-201ENST00000334527 GCC2Q8IWJ2 1684 aa33.23■■■□□ 2.91
NDEL1-201ENST00000334527 RRP7BPQ9NSQ0 103 aa33.23■■■□□ 2.91
NDEL1-201ENST00000334527 CHIC2Q9UKJ5 165 aa33.21■■■□□ 2.91
NDEL1-201ENST00000334527 MIA2Q96PC5 1412 aa33.18■■■□□ 2.9
NDEL1-201ENST00000334527 ARID3CA6NKF2 412 aa33.18■■■□□ 2.9
NDEL1-201ENST00000334527 SUPT16HQ9Y5B9 1047 aaKnown RBP33.17■■■□□ 2.9
NDEL1-201ENST00000334527 AKNAQ7Z591 1439 aa33.15■■■□□ 2.9
NDEL1-201ENST00000334527 KIAA0586Q9BVV6 1533 aa33.12■■■□□ 2.89
NDEL1-201ENST00000334527 KIAA0556O60303 1618 aa33.11■■■□□ 2.89
NDEL1-201ENST00000334527 KDM5BQ9UGL1 1544 aa33.11■■■□□ 2.89
NDEL1-201ENST00000334527 KDM6BO15054 1643 aa33.1■■■□□ 2.89
NDEL1-201ENST00000334527 DISP1Q96F81 1524 aa33.09■■■□□ 2.89
NDEL1-201ENST00000334527 TRIM52Q96A61 297 aa33.07■■■□□ 2.89
NDEL1-201ENST00000334527 DENND4BO75064 1496 aaPredicted RBP33.06■■■□□ 2.88
NDEL1-201ENST00000334527 ANP32CO43423 234 aa33.05■■■□□ 2.88
NDEL1-201ENST00000334527 EIF4G3O43432 1585 aaKnown RBP33.03■■■□□ 2.88
NDEL1-201ENST00000334527 GRIN2AQ12879 1464 aa33.03■■■□□ 2.88
NDEL1-201ENST00000334527 CCER2I3L3R5 266 aa33.01■■■□□ 2.87
NDEL1-201ENST00000334527 NUP153P49790 1475 aaKnown RBP33■■■□□ 2.87
NDEL1-201ENST00000334527 RAPGEF6Q8TEU7 1601 aa32.99■■■□□ 2.87
NDEL1-201ENST00000334527 MPHOSPH9Q99550 1183 aa32.96■■■□□ 2.87
NDEL1-201ENST00000334527 DAPK1P53355 1430 aa32.95■■■□□ 2.87
NDEL1-201ENST00000334527 DNMT1P26358 1616 aaKnown RBP32.91■■■□□ 2.86
NDEL1-201ENST00000334527 ROCK1Q13464 1354 aa32.91■■■□□ 2.86
NDEL1-201ENST00000334527 CDK11AQ9UQ88 783 aaPredicted RBP32.89■■■□□ 2.86
NDEL1-201ENST00000334527 ABCC5O15440 1437 aa32.88■■■□□ 2.85
NDEL1-201ENST00000334527 ZNF644Q9H582 1327 aaPredicted RBP32.86■■■□□ 2.85
NDEL1-201ENST00000334527 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
NDEL1-201ENST00000334527 MAGI1Q96QZ7 1491 aaPredicted RBP32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms