RNA–Protein interactions for RNA: ENST00000334241.8

ZNF555-201, Transcript of zinc finger protein 555, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF555, Length 8,557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555-201ENST00000334241 APPP05067 770 aa11.07□□□□□ -0.64
ZNF555-201ENST00000334241 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
ZNF555-201ENST00000334241 PRM3Q9NNZ6 103 aa11.06□□□□□ -0.64
ZNF555-201ENST00000334241 DRC7Q8IY82 874 aa11.06□□□□□ -0.64
ZNF555-201ENST00000334241 STK11IPQ8N1F8 1099 aa11.01□□□□□ -0.65
ZNF555-201ENST00000334241 TPRNQ4KMQ1 711 aa11□□□□□ -0.65
ZNF555-201ENST00000334241 ARID4BQ4LE39 1312 aaPredicted RBP11□□□□□ -0.65
ZNF555-201ENST00000334241 CLSTN1O94985 981 aa10.99□□□□□ -0.65
ZNF555-201ENST00000334241 FBLN2P98095 1184 aa10.99□□□□□ -0.65
ZNF555-201ENST00000334241 RRP12Q5JTH9 1297 aaKnown RBP10.98□□□□□ -0.65
ZNF555-201ENST00000334241 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
ZNF555-201ENST00000334241 WDR43Q15061 677 aaKnown RBP eCLIP10.96□□□□□ -0.66
ZNF555-201ENST00000334241 HSP90AA2PQ14568 343 aaPredicted RBP10.95□□□□□ -0.66
ZNF555-201ENST00000334241 FAM9BQ8IZU0 186 aa10.95□□□□□ -0.66
ZNF555-201ENST00000334241 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
ZNF555-201ENST00000334241 ARID3AQ99856 593 aa10.94□□□□□ -0.66
ZNF555-201ENST00000334241 FGD1P98174 961 aa10.92□□□□□ -0.66
ZNF555-201ENST00000334241 NOP58Q9Y2X3 529 aaKnown RBP10.92□□□□□ -0.66
ZNF555-201ENST00000334241 A0A0G2JS52 829 aa10.91□□□□□ -0.66
ZNF555-201ENST00000334241 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
ZNF555-201ENST00000334241 GOLGA6L3A6NEY3 463 aa10.9□□□□□ -0.66
ZNF555-201ENST00000334241 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
ZNF555-201ENST00000334241 LOC105371045A0A1W2PR82 267 aa10.89□□□□□ -0.67
ZNF555-201ENST00000334241 MEX3CQ5U5Q3 659 aaKnown RBP10.88□□□□□ -0.67
ZNF555-201ENST00000334241 NOM1Q5C9Z4 860 aaKnown RBP10.88□□□□□ -0.67
ZNF555-201ENST00000334241 GPS2Q13227 327 aa10.88□□□□□ -0.67
ZNF555-201ENST00000334241 LAS1LQ9Y4W2 734 aaKnown RBP10.87□□□□□ -0.67
ZNF555-201ENST00000334241 DEKP35659 375 aaKnown RBP10.87□□□□□ -0.67
ZNF555-201ENST00000334241 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
ZNF555-201ENST00000334241 HTATSF1O43719 755 aaKnown RBP10.86□□□□□ -0.67
ZNF555-201ENST00000334241 TPM4P67936 248 aa10.86□□□□□ -0.67
ZNF555-201ENST00000334241 HMMRO75330 724 aa10.86□□□□□ -0.67
ZNF555-201ENST00000334241 PABPN1Q86U42 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
ZNF555-201ENST00000334241 PATL2C9JE40 543 aaKnown RBP10.85□□□□□ -0.67
ZNF555-201ENST00000334241 PLPPR3Q6T4P5 718 aa10.85□□□□□ -0.67
ZNF555-201ENST00000334241 SYAP1Q96A49 352 aaPredicted RBP10.85□□□□□ -0.67
ZNF555-201ENST00000334241 CEP89Q96ST8 783 aa10.85□□□□□ -0.67
ZNF555-201ENST00000334241 RSPH6AQ9H0K4 717 aa10.85□□□□□ -0.67
ZNF555-201ENST00000334241 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
ZNF555-201ENST00000334241 HSCBQ8IWL3 235 aa10.84□□□□□ -0.67
ZNF555-201ENST00000334241 ABCC9O60706 1549 aa10.84□□□□□ -0.67
ZNF555-201ENST00000334241 KCNJ4P48050 445 aa10.83□□□□□ -0.67
ZNF555-201ENST00000334241 FTSJ3Q8IY81 847 aaKnown RBP10.83□□□□□ -0.68
ZNF555-201ENST00000334241 TAF7LQ5H9L4 462 aa10.83□□□□□ -0.68
ZNF555-201ENST00000334241 ZNF771Q7L3S4 317 aaPredicted RBP10.83□□□□□ -0.68
ZNF555-201ENST00000334241 TEX35Q5T0J7 233 aa10.83□□□□□ -0.68
ZNF555-201ENST00000334241 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
ZNF555-201ENST00000334241 CCDC34Q96HJ3 373 aa10.82□□□□□ -0.68
ZNF555-201ENST00000334241 NAP1L2Q9ULW6 460 aaPredicted RBP10.82□□□□□ -0.68
ZNF555-201ENST00000334241 GNL2Q13823 731 aaKnown RBP10.82□□□□□ -0.68
ZNF555-201ENST00000334241 TONSLQ96HA7 1378 aa10.81□□□□□ -0.68
ZNF555-201ENST00000334241 NEFHP12036 1026 aa10.81□□□□□ -0.68
ZNF555-201ENST00000334241 CCDC70Q6NSX1 233 aa10.81□□□□□ -0.68
ZNF555-201ENST00000334241 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
ZNF555-201ENST00000334241 CHMP4BQ9H444 224 aaKnown RBP10.81□□□□□ -0.68
ZNF555-201ENST00000334241 HSP90B1P14625 803 aaKnown RBP10.81□□□□□ -0.68
ZNF555-201ENST00000334241 MCCP23508 829 aa10.8□□□□□ -0.68
ZNF555-201ENST00000334241 MAP7D2Q96T17 732 aa10.8□□□□□ -0.68
ZNF555-201ENST00000334241 SCAF1Q9H7N4 1312 aaKnown RBP10.79□□□□□ -0.68
ZNF555-201ENST00000334241 TPM3P06753 285 aa10.79□□□□□ -0.68
ZNF555-201ENST00000334241 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
ZNF555-201ENST00000334241 GBP4Q96PP9 640 aa10.79□□□□□ -0.68
ZNF555-201ENST00000334241 ARID3CA6NKF2 412 aa10.78□□□□□ -0.68
ZNF555-201ENST00000334241 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
ZNF555-201ENST00000334241 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
ZNF555-201ENST00000334241 ZBTB7CA1YPR0 619 aa10.77□□□□□ -0.69
ZNF555-201ENST00000334241 IRX6P78412 446 aaPredicted RBP10.77□□□□□ -0.69
ZNF555-201ENST00000334241 MRS2Q9HD23 443 aa10.76□□□□□ -0.69
ZNF555-201ENST00000334241 RDXP35241 583 aaKnown RBP10.76□□□□□ -0.69
ZNF555-201ENST00000334241 PHF14O94880 888 aa10.75□□□□□ -0.69
ZNF555-201ENST00000334241 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
ZNF555-201ENST00000334241 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
ZNF555-201ENST00000334241 DDX10Q13206 875 aaKnown RBP10.73□□□□□ -0.69
ZNF555-201ENST00000334241 PDE4CQ08493 712 aa10.73□□□□□ -0.69
ZNF555-201ENST00000334241 KRI1Q8N9T8 703 aaKnown RBP10.73□□□□□ -0.69
ZNF555-201ENST00000334241 ZNF777Q9ULD5 760 aaPredicted RBP10.72□□□□□ -0.69
ZNF555-201ENST00000334241 PODXL2Q9NZ53 605 aa10.72□□□□□ -0.69
ZNF555-201ENST00000334241 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.69
ZNF555-201ENST00000334241 CWC15Q9P013 229 aaKnown RBP10.71□□□□□ -0.69
ZNF555-201ENST00000334241 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
ZNF555-201ENST00000334241 CDR1P51861 262 aa10.7□□□□□ -0.7
ZNF555-201ENST00000334241 NPHP1O15259 732 aa10.7□□□□□ -0.7
ZNF555-201ENST00000334241 OS9Q13438 667 aaPredicted RBP10.7□□□□□ -0.7
ZNF555-201ENST00000334241 DCTN1Q14203 1278 aa10.7□□□□□ -0.7
ZNF555-201ENST00000334241 DYDC1Q8WWB3 177 aa10.7□□□□□ -0.7
ZNF555-201ENST00000334241 NEXNQ0ZGT2 675 aa10.7□□□□□ -0.7
ZNF555-201ENST00000334241 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.7□□□□□ -0.7
ZNF555-201ENST00000334241 MS4A1P11836 297 aa10.7□□□□□ -0.7
ZNF555-201ENST00000334241 AK7Q96M32 723 aa10.67□□□□□ -0.7
ZNF555-201ENST00000334241 P3H3Q8IVL6 736 aa10.67□□□□□ -0.7
ZNF555-201ENST00000334241 H0YHG0 523 aa10.66□□□□□ -0.7
ZNF555-201ENST00000334241 CHGAP10645 457 aaKnown RBP10.66□□□□□ -0.7
ZNF555-201ENST00000334241 CCAR2Q8N163 923 aaKnown RBP10.66□□□□□ -0.7
ZNF555-201ENST00000334241 RUFY1Q96T51 708 aa10.66□□□□□ -0.7
ZNF555-201ENST00000334241 RGS3P49796 1198 aa10.65□□□□□ -0.7
ZNF555-201ENST00000334241 CCDC66A2RUB6 948 aa10.65□□□□□ -0.7
ZNF555-201ENST00000334241 GZF1Q9H116 711 aaPredicted RBP10.65□□□□□ -0.7
ZNF555-201ENST00000334241 KIAA1211Q6ZU35 1233 aa10.64□□□□□ -0.71
ZNF555-201ENST00000334241 ISY1Q9ULR0 285 aaKnown RBP10.64□□□□□ -0.71
ZNF555-201ENST00000334241 TPM1P09493 284 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms