RNA–Protein interactions for RNA: ENST00000334241.8

ZNF555-201, Transcript of zinc finger protein 555, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF555, Length 8,557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555-201ENST00000334241 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
ZNF555-201ENST00000334241 MYT1Q01538 1121 aa13.94□□□□□ -0.18
ZNF555-201ENST00000334241 ERICH6Q7L0X2 663 aa13.78□□□□□ -0.2
ZNF555-201ENST00000334241 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
ZNF555-201ENST00000334241 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
ZNF555-201ENST00000334241 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.26
ZNF555-201ENST00000334241 TTBK1Q5TCY1 1321 aaPredicted RBP13.32□□□□□ -0.28
ZNF555-201ENST00000334241 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.29
ZNF555-201ENST00000334241 NEFLP07196 543 aa13.02□□□□□ -0.33
ZNF555-201ENST00000334241 DAXXQ9UER7 740 aaPredicted RBP13.02□□□□□ -0.33
ZNF555-201ENST00000334241 APLP2Q06481 763 aa12.87□□□□□ -0.35
ZNF555-201ENST00000334241 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.37
ZNF555-201ENST00000334241 RTL5Q5HYW3 569 aaPredicted RBP12.71□□□□□ -0.38
ZNF555-201ENST00000334241 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
ZNF555-201ENST00000334241 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
ZNF555-201ENST00000334241 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
ZNF555-201ENST00000334241 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
ZNF555-201ENST00000334241 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
ZNF555-201ENST00000334241 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
ZNF555-201ENST00000334241 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
ZNF555-201ENST00000334241 CLSPNQ9HAW4 1339 aa12.33□□□□□ -0.43
ZNF555-201ENST00000334241 EIF5BO60841 1220 aaKnown RBP12.28□□□□□ -0.44
ZNF555-201ENST00000334241 RANGAP1P46060 587 aaPredicted RBP12.21□□□□□ -0.46
ZNF555-201ENST00000334241 ANP32BQ92688 251 aaKnown RBP12.18□□□□□ -0.46
ZNF555-201ENST00000334241 NISCHQ9Y2I1 1504 aa12.12□□□□□ -0.47
ZNF555-201ENST00000334241 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
ZNF555-201ENST00000334241 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
ZNF555-201ENST00000334241 TNNT2P45379 298 aaPredicted RBP12.02□□□□□ -0.48
ZNF555-201ENST00000334241 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
ZNF555-201ENST00000334241 POLR3GLQ9BT43 218 aa11.97□□□□□ -0.49
ZNF555-201ENST00000334241 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
ZNF555-201ENST00000334241 ANP32AP39687 249 aaKnown RBP11.93□□□□□ -0.5
ZNF555-201ENST00000334241 CNGB1Q14028 1251 aaPredicted RBP11.88□□□□□ -0.51
ZNF555-201ENST00000334241 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
ZNF555-201ENST00000334241 CDK11BP21127 795 aaKnown RBP11.86□□□□□ -0.51
ZNF555-201ENST00000334241 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
ZNF555-201ENST00000334241 HRCP23327 699 aa11.81□□□□□ -0.52
ZNF555-201ENST00000334241 TRIM44Q96DX7 344 aaPredicted RBP11.79□□□□□ -0.52
ZNF555-201ENST00000334241 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
ZNF555-201ENST00000334241 NEFMP07197 916 aa11.74□□□□□ -0.53
ZNF555-201ENST00000334241 BCL11AQ9H165 835 aa11.72□□□□□ -0.53
ZNF555-201ENST00000334241 CANXP27824 592 aaKnown RBP11.72□□□□□ -0.53
ZNF555-201ENST00000334241 UPF2Q9HAU5 1272 aaKnown RBP11.71□□□□□ -0.54
ZNF555-201ENST00000334241 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
ZNF555-201ENST00000334241 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
ZNF555-201ENST00000334241 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
ZNF555-201ENST00000334241 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
ZNF555-201ENST00000334241 BCANQ96GW7 911 aa11.66□□□□□ -0.54
ZNF555-201ENST00000334241 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
ZNF555-201ENST00000334241 GTF3C3Q9Y5Q9 886 aa11.64□□□□□ -0.55
ZNF555-201ENST00000334241 NPM2Q86SE8 214 aaKnown RBP11.61□□□□□ -0.55
ZNF555-201ENST00000334241 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
ZNF555-201ENST00000334241 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
ZNF555-201ENST00000334241 ANP32EQ9BTT0 268 aa11.56□□□□□ -0.56
ZNF555-201ENST00000334241 ANP32CO43423 234 aa11.54□□□□□ -0.56
ZNF555-201ENST00000334241 NBR1Q14596 966 aa11.53□□□□□ -0.56
ZNF555-201ENST00000334241 ARXQ96QS3 562 aa11.53□□□□□ -0.56
ZNF555-201ENST00000334241 ITGAEP38570 1179 aa11.52□□□□□ -0.57
ZNF555-201ENST00000334241 CALRP27797 417 aaKnown RBP11.51□□□□□ -0.57
ZNF555-201ENST00000334241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.5□□□□□ -0.57
ZNF555-201ENST00000334241 HNRNPUL2Q1KMD3 747 aaKnown RBP11.5□□□□□ -0.57
ZNF555-201ENST00000334241 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
ZNF555-201ENST00000334241 ERICH6BQ5W0A0 696 aa11.48□□□□□ -0.57
ZNF555-201ENST00000334241 PPARGC1BQ86YN6 1023 aaKnown RBP11.48□□□□□ -0.57
ZNF555-201ENST00000334241 AMER1Q5JTC6 1135 aaPredicted RBP11.46□□□□□ -0.57
ZNF555-201ENST00000334241 NAP1L5Q96NT1 182 aaPredicted RBP11.43□□□□□ -0.58
ZNF555-201ENST00000334241 ZRSR1Q15695 479 aaKnown RBP11.42□□□□□ -0.58
ZNF555-201ENST00000334241 PTMAP06454 111 aaKnown RBP11.42□□□□□ -0.58
ZNF555-201ENST00000334241 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
ZNF555-201ENST00000334241 TNNT3P45378 269 aaPredicted RBP11.39□□□□□ -0.59
ZNF555-201ENST00000334241 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
ZNF555-201ENST00000334241 GOLGA6L6A8MZA4 724 aa11.36□□□□□ -0.59
ZNF555-201ENST00000334241 BECN1Q14457 450 aa11.35□□□□□ -0.59
ZNF555-201ENST00000334241 NRDCO43847 1150 aa11.34□□□□□ -0.59
ZNF555-201ENST00000334241 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.32□□□□□ -0.6
ZNF555-201ENST00000334241 PTMSP20962 102 aa11.32□□□□□ -0.6
ZNF555-201ENST00000334241 L1TD1Q5T7N2 865 aaKnown RBP11.32□□□□□ -0.6
ZNF555-201ENST00000334241 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
ZNF555-201ENST00000334241 ACIN1Q9UKV3 1341 aaKnown RBP11.29□□□□□ -0.6
ZNF555-201ENST00000334241 FKBP8Q14318 412 aa11.24□□□□□ -0.61
ZNF555-201ENST00000334241 CCDC136Q96JN2 1154 aa11.23□□□□□ -0.61
ZNF555-201ENST00000334241 MYH16Q9H6N6 1097 aa11.23□□□□□ -0.61
ZNF555-201ENST00000334241 SETQ01105 290 aaPredicted RBP11.21□□□□□ -0.61
ZNF555-201ENST00000334241 NCBP3Q53F19 620 aaKnown RBP11.21□□□□□ -0.61
ZNF555-201ENST00000334241 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.62
ZNF555-201ENST00000334241 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
ZNF555-201ENST00000334241 MSNP26038 577 aaKnown RBP11.2□□□□□ -0.62
ZNF555-201ENST00000334241 NEUROD1Q13562 356 aa11.2□□□□□ -0.62
ZNF555-201ENST00000334241 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
ZNF555-201ENST00000334241 NOC3LQ8WTT2 800 aaKnown RBP11.17□□□□□ -0.62
ZNF555-201ENST00000334241 GOLGA6L1Q8N7Z2 621 aa11.16□□□□□ -0.62
ZNF555-201ENST00000334241 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
ZNF555-201ENST00000334241 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
ZNF555-201ENST00000334241 KIAA2012Q0VF49 1180 aa11.14□□□□□ -0.63
ZNF555-201ENST00000334241 PPM1GO15355 546 aaPredicted RBP11.13□□□□□ -0.63
ZNF555-201ENST00000334241 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
ZNF555-201ENST00000334241 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
ZNF555-201ENST00000334241 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
ZNF555-201ENST00000334241 A0A0U1RQG5 324 aaPredicted RBP11.08□□□□□ -0.64
ZNF555-201ENST00000334241 GOLGA6L4A6NEF3 574 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms