RNA–Protein interactions for RNA: ENST00000331889.10

CNOT10-202, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 1 (best) BASIC

Gene CNOT10, Length 2,573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-202ENST00000331889 PHLDB1Q86UU1 1377 aa22.93■■□□□ 1.26
CNOT10-202ENST00000331889 P3H3Q8IVL6 736 aa22.91■■□□□ 1.26
CNOT10-202ENST00000331889 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.25
CNOT10-202ENST00000331889 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
CNOT10-202ENST00000331889 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
CNOT10-202ENST00000331889 PCF11O94913 1555 aaKnown RBP22.85■■□□□ 1.25
CNOT10-202ENST00000331889 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
CNOT10-202ENST00000331889 RAD54L2Q9Y4B4 1467 aa22.83■■□□□ 1.25
CNOT10-202ENST00000331889 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
CNOT10-202ENST00000331889 ATP1B4Q9UN42 357 aaPredicted RBP22.82■■□□□ 1.24
CNOT10-202ENST00000331889 FHOD3Q2V2M9 1422 aa22.8■■□□□ 1.24
CNOT10-202ENST00000331889 SIN3AQ96ST3 1273 aa22.78■■□□□ 1.24
CNOT10-202ENST00000331889 ABCA10Q8WWZ4 1543 aa22.78■■□□□ 1.24
CNOT10-202ENST00000331889 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
CNOT10-202ENST00000331889 DNMBPQ6XZF7 1577 aa22.77■■□□□ 1.24
CNOT10-202ENST00000331889 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.23
CNOT10-202ENST00000331889 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
CNOT10-202ENST00000331889 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
CNOT10-202ENST00000331889 FYCO1Q9BQS8 1478 aa22.72■■□□□ 1.23
CNOT10-202ENST00000331889 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
CNOT10-202ENST00000331889 CASKIN1Q8WXD9 1431 aa22.71■■□□□ 1.23
CNOT10-202ENST00000331889 NESP48681 1621 aa22.71■■□□□ 1.23
CNOT10-202ENST00000331889 SUPT16HQ9Y5B9 1047 aaKnown RBP22.71■■□□□ 1.23
CNOT10-202ENST00000331889 EFCAB5A4FU69 1503 aa22.7■■□□□ 1.22
CNOT10-202ENST00000331889 AQRO60306 1485 aaKnown RBP eCLIP22.67■■□□□ 1.225e-7■■■□□ 17.2
CNOT10-202ENST00000331889 CUL7Q14999 1698 aa22.65■■□□□ 1.22
CNOT10-202ENST00000331889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.64■■□□□ 1.22
CNOT10-202ENST00000331889 CTTNBP2Q8WZ74 1663 aa22.63■■□□□ 1.21
CNOT10-202ENST00000331889 DDX10Q13206 875 aaKnown RBP22.62■■□□□ 1.21
CNOT10-202ENST00000331889 TIMELESSQ9UNS1 1208 aa22.61■■□□□ 1.21
CNOT10-202ENST00000331889 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
CNOT10-202ENST00000331889 FMN1Q68DA7 1419 aa22.59■■□□□ 1.21
CNOT10-202ENST00000331889 FGD6Q6ZV73 1430 aa22.59■■□□□ 1.21
CNOT10-202ENST00000331889 PPP1R15AO75807 674 aaPredicted RBP22.58■■□□□ 1.21
CNOT10-202ENST00000331889 URB2Q14146 1524 aaKnown RBP22.56■■□□□ 1.2
CNOT10-202ENST00000331889 HIRIP3Q9BW71 556 aaPredicted RBP22.55■■□□□ 1.2
CNOT10-202ENST00000331889 TDRD9Q8NDG6 1382 aaKnown RBP22.54■■□□□ 1.2
CNOT10-202ENST00000331889 PTPRKQ15262 1439 aa22.53■■□□□ 1.2
CNOT10-202ENST00000331889 MTUS2Q5JR59 1369 aa22.52■■□□□ 1.2
CNOT10-202ENST00000331889 TSHZ2Q9NRE2 1034 aa22.52■■□□□ 1.2
CNOT10-202ENST00000331889 SAMD9Q5K651 1589 aa22.49■■□□□ 1.19
CNOT10-202ENST00000331889 LRRIQ1Q96JM4 1722 aa22.48■■□□□ 1.19
CNOT10-202ENST00000331889 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
CNOT10-202ENST00000331889 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
CNOT10-202ENST00000331889 HFM1A2PYH4 1435 aa22.47■■□□□ 1.19
CNOT10-202ENST00000331889 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
CNOT10-202ENST00000331889 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
CNOT10-202ENST00000331889 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
CNOT10-202ENST00000331889 NCOA2Q15596 1464 aa22.44■■□□□ 1.18
CNOT10-202ENST00000331889 UACAQ9BZF9 1416 aa22.43■■□□□ 1.18
CNOT10-202ENST00000331889 PTPN23Q9H3S7 1636 aa22.43■■□□□ 1.18
CNOT10-202ENST00000331889 TONSLQ96HA7 1378 aa22.42■■□□□ 1.18
CNOT10-202ENST00000331889 MYOM3Q5VTT5 1437 aa22.42■■□□□ 1.18
CNOT10-202ENST00000331889 ANP32EQ9BTT0 268 aa22.41■■□□□ 1.18
CNOT10-202ENST00000331889 NAIPQ13075 1403 aa22.41■■□□□ 1.18
CNOT10-202ENST00000331889 CCER2I3L3R5 266 aa22.35■■□□□ 1.17
CNOT10-202ENST00000331889 ANP32CO43423 234 aa22.35■■□□□ 1.17
CNOT10-202ENST00000331889 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
CNOT10-202ENST00000331889 SUPT6HQ7KZ85 1726 aaKnown RBP22.35■■□□□ 1.17
CNOT10-202ENST00000331889 MAGI3Q5TCQ9 1506 aa22.33■■□□□ 1.17
CNOT10-202ENST00000331889 EHBP1L1Q8N3D4 1523 aa22.33■■□□□ 1.17
CNOT10-202ENST00000331889 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.16
CNOT10-202ENST00000331889 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
CNOT10-202ENST00000331889 ARHGEF11O15085 1522 aa22.3■■□□□ 1.16
CNOT10-202ENST00000331889 FKBP8Q14318 412 aa22.3■■□□□ 1.16
CNOT10-202ENST00000331889 BCANQ96GW7 911 aa22.3■■□□□ 1.16
CNOT10-202ENST00000331889 KDM5BQ9UGL1 1544 aa22.29■■□□□ 1.16
CNOT10-202ENST00000331889 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
CNOT10-202ENST00000331889 RRP7BPQ9NSQ0 103 aa22.28■■□□□ 1.16
CNOT10-202ENST00000331889 TARBP1Q13395 1621 aaKnown RBP22.27■■□□□ 1.16
CNOT10-202ENST00000331889 CHIC2Q9UKJ5 165 aa22.26■■□□□ 1.15
CNOT10-202ENST00000331889 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
CNOT10-202ENST00000331889 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
CNOT10-202ENST00000331889 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
CNOT10-202ENST00000331889 BCL11AQ9H165 835 aa22.19■■□□□ 1.14
CNOT10-202ENST00000331889 EPRSP07814 1512 aaKnown RBP22.18■■□□□ 1.14
CNOT10-202ENST00000331889 KDM6BO15054 1643 aa22.18■■□□□ 1.14
CNOT10-202ENST00000331889 HECW1Q76N89 1606 aa22.18■■□□□ 1.14
CNOT10-202ENST00000331889 GCC2Q8IWJ2 1684 aa22.16■■□□□ 1.14
CNOT10-202ENST00000331889 IQGAP2Q13576 1575 aa22.15■■□□□ 1.14
CNOT10-202ENST00000331889 CDK13Q14004 1512 aaKnown RBP22.15■■□□□ 1.14
CNOT10-202ENST00000331889 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
CNOT10-202ENST00000331889 ARID3CA6NKF2 412 aa22.14■■□□□ 1.14
CNOT10-202ENST00000331889 HSPA5P11021 654 aaKnown RBP22.13■■□□□ 1.13
CNOT10-202ENST00000331889 AKNAQ7Z591 1439 aa22.13■■□□□ 1.13
CNOT10-202ENST00000331889 WASHC2AQ641Q2 1341 aa22.12■■□□□ 1.13
CNOT10-202ENST00000331889 NEFLP07196 543 aa22.12■■□□□ 1.13
CNOT10-202ENST00000331889 MIA2Q96PC5 1412 aa22.11■■□□□ 1.13
CNOT10-202ENST00000331889 MPHOSPH9Q99550 1183 aa22.11■■□□□ 1.13
CNOT10-202ENST00000331889 ADAMTS12P58397 1594 aa22.1■■□□□ 1.13
CNOT10-202ENST00000331889 WDR62O43379 1518 aa22.09■■□□□ 1.13
CNOT10-202ENST00000331889 FOXD1Q16676 465 aa22.07■■□□□ 1.12
CNOT10-202ENST00000331889 L3MBTL2Q969R5 705 aa22.05■■□□□ 1.12
CNOT10-202ENST00000331889 EIF4G2P78344 907 aaKnown RBP eCLIP22.04■■□□□ 1.12
CNOT10-202ENST00000331889 HNRNPUQ00839 825 aaKnown RBP eCLIP22.02■■□□□ 1.12
CNOT10-202ENST00000331889 RBM19Q9Y4C8 960 aaKnown RBP22.01■■□□□ 1.11
CNOT10-202ENST00000331889 C11orf95C9JLR9 678 aaPredicted RBP21.99■■□□□ 1.11
CNOT10-202ENST00000331889 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
CNOT10-202ENST00000331889 DAPK1P53355 1430 aa21.99■■□□□ 1.11
CNOT10-202ENST00000331889 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms