RNA–Protein interactions for RNA: ENST00000331889.10

CNOT10-202, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 1 (best) BASIC

Gene CNOT10, Length 2,573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-202ENST00000331889 NISCHQ9Y2I1 1504 aa32.47■■■□□ 2.79
CNOT10-202ENST00000331889 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
CNOT10-202ENST00000331889 ZCCHC6Q5VYS8 1495 aaKnown RBP27.49■■□□□ 1.99
CNOT10-202ENST00000331889 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
CNOT10-202ENST00000331889 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
CNOT10-202ENST00000331889 DCAF8L2P0C7V8 631 aa26.91■■□□□ 1.9
CNOT10-202ENST00000331889 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
CNOT10-202ENST00000331889 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.85
CNOT10-202ENST00000331889 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
CNOT10-202ENST00000331889 HRCP23327 699 aa26.09■■□□□ 1.77
CNOT10-202ENST00000331889 PCGF6Q9BYE7 350 aa26■■□□□ 1.75
CNOT10-202ENST00000331889 ABCC9O60706 1549 aa25.95■■□□□ 1.75
CNOT10-202ENST00000331889 LOC105371045A0A1W2PR82 267 aa25.93■■□□□ 1.74
CNOT10-202ENST00000331889 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
CNOT10-202ENST00000331889 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
CNOT10-202ENST00000331889 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
CNOT10-202ENST00000331889 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
CNOT10-202ENST00000331889 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
CNOT10-202ENST00000331889 TRIM26Q12899 539 aaPredicted RBP25.45■■□□□ 1.66
CNOT10-202ENST00000331889 NACADO15069 1562 aa25.39■■□□□ 1.65
CNOT10-202ENST00000331889 CECR2Q9BXF3 1484 aa25.36■■□□□ 1.65
CNOT10-202ENST00000331889 FAM9AQ8IZU1 332 aaPredicted RBP25.28■■□□□ 1.64
CNOT10-202ENST00000331889 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
CNOT10-202ENST00000331889 WIZO95785 1651 aa25.14■■□□□ 1.61
CNOT10-202ENST00000331889 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
CNOT10-202ENST00000331889 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
CNOT10-202ENST00000331889 ZEB1P37275 1124 aaPredicted RBP24.91■■□□□ 1.58
CNOT10-202ENST00000331889 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
CNOT10-202ENST00000331889 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
CNOT10-202ENST00000331889 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
CNOT10-202ENST00000331889 CCDC88BA6NC98 1476 aa24.66■■□□□ 1.54
CNOT10-202ENST00000331889 ABCC8Q09428 1581 aa24.64■■□□□ 1.54
CNOT10-202ENST00000331889 PELP1Q8IZL8 1130 aaKnown RBP24.62■■□□□ 1.53
CNOT10-202ENST00000331889 UNC13AQ9UPW8 1703 aa24.6■■□□□ 1.53
CNOT10-202ENST00000331889 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
CNOT10-202ENST00000331889 SCAF1Q9H7N4 1312 aaKnown RBP24.51■■□□□ 1.51
CNOT10-202ENST00000331889 SOGA1O94964 1423 aa24.46■■□□□ 1.51
CNOT10-202ENST00000331889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.44■■□□□ 1.5
CNOT10-202ENST00000331889 WRNQ14191 1432 aaPredicted RBP eCLIP24.39■■□□□ 1.5
CNOT10-202ENST00000331889 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
CNOT10-202ENST00000331889 PABPN1Q86U42 306 aaKnown RBP eCLIP24.36■■□□□ 1.49
CNOT10-202ENST00000331889 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
CNOT10-202ENST00000331889 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
CNOT10-202ENST00000331889 TNIKQ9UKE5 1360 aa24.33■■□□□ 1.49
CNOT10-202ENST00000331889 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
CNOT10-202ENST00000331889 CSRNP3Q8WYN3 585 aa24.31■■□□□ 1.48
CNOT10-202ENST00000331889 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
CNOT10-202ENST00000331889 EEA1Q15075 1411 aa24.28■■□□□ 1.48
CNOT10-202ENST00000331889 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
CNOT10-202ENST00000331889 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
CNOT10-202ENST00000331889 GOLGA3Q08378 1498 aa24.14■■□□□ 1.46
CNOT10-202ENST00000331889 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
CNOT10-202ENST00000331889 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
CNOT10-202ENST00000331889 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
CNOT10-202ENST00000331889 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
CNOT10-202ENST00000331889 KIF21BO75037 1637 aa23.96■■□□□ 1.43
CNOT10-202ENST00000331889 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
CNOT10-202ENST00000331889 DIEXFQ68CQ4 756 aaKnown RBP23.96■■□□□ 1.43
CNOT10-202ENST00000331889 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
CNOT10-202ENST00000331889 CLIP1P30622 1438 aa23.89■■□□□ 1.42
CNOT10-202ENST00000331889 RAPGEF2Q9Y4G8 1499 aa23.84■■□□□ 1.41
CNOT10-202ENST00000331889 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
CNOT10-202ENST00000331889 HNRNPUL2Q1KMD3 747 aaKnown RBP23.79■■□□□ 1.4
CNOT10-202ENST00000331889 GTF3C3Q9Y5Q9 886 aa23.77■■□□□ 1.4
CNOT10-202ENST00000331889 TOP2BQ02880 1626 aa23.75■■□□□ 1.39
CNOT10-202ENST00000331889 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
CNOT10-202ENST00000331889 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
CNOT10-202ENST00000331889 APLP2Q06481 763 aa23.67■■□□□ 1.38
CNOT10-202ENST00000331889 CENPBP07199 599 aaPredicted RBP23.65■■□□□ 1.38
CNOT10-202ENST00000331889 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
CNOT10-202ENST00000331889 PRXQ9BXM0 1461 aa23.58■■□□□ 1.37
CNOT10-202ENST00000331889 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
CNOT10-202ENST00000331889 MYT1Q01538 1121 aa23.53■■□□□ 1.36
CNOT10-202ENST00000331889 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
CNOT10-202ENST00000331889 CUX1P39880 1505 aa23.51■■□□□ 1.35
CNOT10-202ENST00000331889 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
CNOT10-202ENST00000331889 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
CNOT10-202ENST00000331889 MIER1Q8N108 512 aa23.45■■□□□ 1.34
CNOT10-202ENST00000331889 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
CNOT10-202ENST00000331889 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
CNOT10-202ENST00000331889 YTHDC1Q96MU7 727 aaKnown RBP23.4■■□□□ 1.34
CNOT10-202ENST00000331889 CFTRP13569 1480 aa23.39■■□□□ 1.34
CNOT10-202ENST00000331889 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
CNOT10-202ENST00000331889 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
CNOT10-202ENST00000331889 ARHGAP35Q9NRY4 1499 aa23.29■■□□□ 1.32
CNOT10-202ENST00000331889 RRBP1Q9P2E9 1410 aaKnown RBP23.29■■□□□ 1.32
CNOT10-202ENST00000331889 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
CNOT10-202ENST00000331889 IGF1RP08069 1367 aa23.19■■□□□ 1.3
CNOT10-202ENST00000331889 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
CNOT10-202ENST00000331889 CUX2O14529 1486 aa23.17■■□□□ 1.3
CNOT10-202ENST00000331889 PRDM2Q13029 1718 aa23.14■■□□□ 1.29
CNOT10-202ENST00000331889 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
CNOT10-202ENST00000331889 ITGAEP38570 1179 aa23.1■■□□□ 1.29
CNOT10-202ENST00000331889 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
CNOT10-202ENST00000331889 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
CNOT10-202ENST00000331889 TIAM1Q13009 1591 aa23.03■■□□□ 1.28
CNOT10-202ENST00000331889 MAP3K1Q13233 1512 aa23■■□□□ 1.27
CNOT10-202ENST00000331889 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
CNOT10-202ENST00000331889 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
CNOT10-202ENST00000331889 MAPKBP1O60336 1514 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms