RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 TOPBP1Q92547 1522 aa24.8■■□□□ 1.56
PRKCD-201ENST00000330452 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
PRKCD-201ENST00000330452 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
PRKCD-201ENST00000330452 CARMIL1Q5VZK9 1371 aa24.76■■□□□ 1.55
PRKCD-201ENST00000330452 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
PRKCD-201ENST00000330452 ARHGAP35Q9NRY4 1499 aa24.72■■□□□ 1.55
PRKCD-201ENST00000330452 MIER1Q8N108 512 aa24.72■■□□□ 1.55
PRKCD-201ENST00000330452 UBE2Q2Q8WVN8 375 aa24.72■■□□□ 1.55
PRKCD-201ENST00000330452 SLC24A1O60721 1099 aa24.69■■□□□ 1.54
PRKCD-201ENST00000330452 DNMBPQ6XZF7 1577 aa24.69■■□□□ 1.54
PRKCD-201ENST00000330452 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
PRKCD-201ENST00000330452 DHX57Q6P158 1386 aaKnown RBP24.66■■□□□ 1.54
PRKCD-201ENST00000330452 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
PRKCD-201ENST00000330452 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.54
PRKCD-201ENST00000330452 PDS5BQ9NTI5 1447 aa24.62■■□□□ 1.53
PRKCD-201ENST00000330452 RRBP1Q9P2E9 1410 aaKnown RBP24.62■■□□□ 1.53
PRKCD-201ENST00000330452 SALL2Q9Y467 1007 aaPredicted RBP24.57■■□□□ 1.52
PRKCD-201ENST00000330452 ITGAEP38570 1179 aa24.57■■□□□ 1.52
PRKCD-201ENST00000330452 CCNB3Q8WWL7 1395 aa24.56■■□□□ 1.52
PRKCD-201ENST00000330452 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
PRKCD-201ENST00000330452 EIF5BO60841 1220 aaKnown RBP24.5■■□□□ 1.51
PRKCD-201ENST00000330452 RBM19Q9Y4C8 960 aaKnown RBP24.48■■□□□ 1.51
PRKCD-201ENST00000330452 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.511e-6■■■■□ 25.1
PRKCD-201ENST00000330452 MSH5O43196 834 aa24.45■■□□□ 1.5
PRKCD-201ENST00000330452 CCDC136Q96JN2 1154 aa24.44■■□□□ 1.5
PRKCD-201ENST00000330452 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
PRKCD-201ENST00000330452 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
PRKCD-201ENST00000330452 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
PRKCD-201ENST00000330452 DEKP35659 375 aaKnown RBP24.37■■□□□ 1.49
PRKCD-201ENST00000330452 MYT1LQ9UL68 1186 aa24.36■■□□□ 1.49
PRKCD-201ENST00000330452 LRRC9Q6ZRR7 1453 aa24.35■■□□□ 1.49
PRKCD-201ENST00000330452 ARID3CA6NKF2 412 aa24.35■■□□□ 1.49
PRKCD-201ENST00000330452 MAP3K1Q13233 1512 aa24.35■■□□□ 1.49
PRKCD-201ENST00000330452 RAB3GAP2Q9H2M9 1393 aa24.34■■□□□ 1.49
PRKCD-201ENST00000330452 PHLDB1Q86UU1 1377 aa24.34■■□□□ 1.49
PRKCD-201ENST00000330452 ERICH6BQ5W0A0 696 aa24.34■■□□□ 1.49
PRKCD-201ENST00000330452 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
PRKCD-201ENST00000330452 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
PRKCD-201ENST00000330452 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
PRKCD-201ENST00000330452 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
PRKCD-201ENST00000330452 FAM50AQ14320 339 aaKnown RBP24.29■■□□□ 1.48
PRKCD-201ENST00000330452 MRC2Q9UBG0 1479 aa24.28■■□□□ 1.48
PRKCD-201ENST00000330452 PCF11O94913 1555 aaKnown RBP24.27■■□□□ 1.48
PRKCD-201ENST00000330452 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
PRKCD-201ENST00000330452 TARBP1Q13395 1621 aaKnown RBP24.27■■□□□ 1.48
PRKCD-201ENST00000330452 FBLN2P98095 1184 aa24.23■■□□□ 1.47
PRKCD-201ENST00000330452 SETD5Q9C0A6 1442 aa24.23■■□□□ 1.47
PRKCD-201ENST00000330452 MAPKBP1O60336 1514 aa24.22■■□□□ 1.47
PRKCD-201ENST00000330452 CUL7Q14999 1698 aa24.2■■□□□ 1.46
PRKCD-201ENST00000330452 CFAP43Q8NDM7 1665 aa24.19■■□□□ 1.46
PRKCD-201ENST00000330452 DAXXQ9UER7 740 aaPredicted RBP24.18■■□□□ 1.46
PRKCD-201ENST00000330452 BCANQ96GW7 911 aa24.17■■□□□ 1.46
PRKCD-201ENST00000330452 SIN3AQ96ST3 1273 aa24.13■■□□□ 1.45
PRKCD-201ENST00000330452 FYCO1Q9BQS8 1478 aa24.12■■□□□ 1.45
PRKCD-201ENST00000330452 CASKIN1Q8WXD9 1431 aa24.12■■□□□ 1.45
PRKCD-201ENST00000330452 PKNOX2Q96KN3 472 aa24.12■■□□□ 1.45
PRKCD-201ENST00000330452 EFCAB5A4FU69 1503 aa24.12■■□□□ 1.45
PRKCD-201ENST00000330452 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
PRKCD-201ENST00000330452 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.09■■□□□ 1.45
PRKCD-201ENST00000330452 PLEKHG5O94827 1062 aa24.08■■□□□ 1.45
PRKCD-201ENST00000330452 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.45
PRKCD-201ENST00000330452 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
PRKCD-201ENST00000330452 WDR62O43379 1518 aa24.03■■□□□ 1.44
PRKCD-201ENST00000330452 FMN1Q68DA7 1419 aa24.03■■□□□ 1.44
PRKCD-201ENST00000330452 GRIN2BQ13224 1484 aa24.02■■□□□ 1.44
PRKCD-201ENST00000330452 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
PRKCD-201ENST00000330452 IFT140Q96RY7 1462 aa24■■□□□ 1.43
PRKCD-201ENST00000330452 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
PRKCD-201ENST00000330452 MTUS2Q5JR59 1369 aa23.97■■□□□ 1.43
PRKCD-201ENST00000330452 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
PRKCD-201ENST00000330452 FGD6Q6ZV73 1430 aa23.96■■□□□ 1.43
PRKCD-201ENST00000330452 FKBP8Q14318 412 aa23.96■■□□□ 1.43
PRKCD-201ENST00000330452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.95■■□□□ 1.43
PRKCD-201ENST00000330452 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
PRKCD-201ENST00000330452 KCNH8Q96L42 1107 aa23.94■■□□□ 1.42
PRKCD-201ENST00000330452 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
PRKCD-201ENST00000330452 SAMD9Q5K651 1589 aa23.9■■□□□ 1.42
PRKCD-201ENST00000330452 DDX10Q13206 875 aaKnown RBP23.89■■□□□ 1.42
PRKCD-201ENST00000330452 IL27Q8NEV9 243 aa23.89■■□□□ 1.42
PRKCD-201ENST00000330452 PTPRKQ15262 1439 aa23.89■■□□□ 1.42
PRKCD-201ENST00000330452 HIRIP3Q9BW71 556 aaPredicted RBP23.88■■□□□ 1.41
PRKCD-201ENST00000330452 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
PRKCD-201ENST00000330452 IQGAP2Q13576 1575 aa23.87■■□□□ 1.41
PRKCD-201ENST00000330452 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
PRKCD-201ENST00000330452 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
PRKCD-201ENST00000330452 NCOA2Q15596 1464 aa23.85■■□□□ 1.41
PRKCD-201ENST00000330452 PODXL2Q9NZ53 605 aa23.84■■□□□ 1.41
PRKCD-201ENST00000330452 RTN4Q9NQC3 1192 aaKnown RBP23.83■■□□□ 1.4
PRKCD-201ENST00000330452 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.4
PRKCD-201ENST00000330452 CDK13Q14004 1512 aaKnown RBP23.83■■□□□ 1.4
PRKCD-201ENST00000330452 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
PRKCD-201ENST00000330452 MYOM3Q5VTT5 1437 aa23.81■■□□□ 1.4
PRKCD-201ENST00000330452 CHIC2Q9UKJ5 165 aa23.8■■□□□ 1.4
PRKCD-201ENST00000330452 HFM1A2PYH4 1435 aa23.79■■□□□ 1.4
PRKCD-201ENST00000330452 MAGI3Q5TCQ9 1506 aa23.79■■□□□ 1.4
PRKCD-201ENST00000330452 PTPN23Q9H3S7 1636 aa23.75■■□□□ 1.39
PRKCD-201ENST00000330452 NAIPQ13075 1403 aa23.75■■□□□ 1.39
PRKCD-201ENST00000330452 TONSLQ96HA7 1378 aa23.75■■□□□ 1.39
PRKCD-201ENST00000330452 UACAQ9BZF9 1416 aa23.75■■□□□ 1.39
PRKCD-201ENST00000330452 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms