RNA–Protein interactions for RNA: ENST00000328867.8

CAPN12-201, Transcript of calpain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN12, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-201ENST00000328867 PRDM2Q13029 1718 aa27.85■■■□□ 2.05
CAPN12-201ENST00000328867 PPP1R15AO75807 674 aaPredicted RBP27.82■■■□□ 2.04
CAPN12-201ENST00000328867 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
CAPN12-201ENST00000328867 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
CAPN12-201ENST00000328867 KANK4Q5T7N3 995 aaPredicted RBP27.77■■■□□ 2.04
CAPN12-201ENST00000328867 MAPKBP1O60336 1514 aa27.77■■■□□ 2.04
CAPN12-201ENST00000328867 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
CAPN12-201ENST00000328867 RANGAP1P46060 587 aaPredicted RBP27.76■■■□□ 2.03
CAPN12-201ENST00000328867 ANP32CO43423 234 aa27.76■■■□□ 2.03
CAPN12-201ENST00000328867 ARAP1Q96P48 1450 aa27.74■■■□□ 2.03
CAPN12-201ENST00000328867 DEKP35659 375 aaKnown RBP27.74■■■□□ 2.03
CAPN12-201ENST00000328867 WDR97A6NE52 1622 aa27.69■■■□□ 2.02
CAPN12-201ENST00000328867 RAB3GAP2Q9H2M9 1393 aa27.68■■■□□ 2.02
CAPN12-201ENST00000328867 ERICH6BQ5W0A0 696 aa27.65■■■□□ 2.02
CAPN12-201ENST00000328867 TIMELESSQ9UNS1 1208 aa27.65■■■□□ 2.02
CAPN12-201ENST00000328867 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
CAPN12-201ENST00000328867 SETD5Q9C0A6 1442 aa27.54■■■□□ 2
CAPN12-201ENST00000328867 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
CAPN12-201ENST00000328867 PPP4R2Q9NY27 417 aa27.5■■□□□ 1.99
CAPN12-201ENST00000328867 SIN3AQ96ST3 1273 aa27.47■■□□□ 1.99
CAPN12-201ENST00000328867 ARHGAP35Q9NRY4 1499 aa27.46■■□□□ 1.99
CAPN12-201ENST00000328867 IGF1RP08069 1367 aa27.45■■□□□ 1.98
CAPN12-201ENST00000328867 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
CAPN12-201ENST00000328867 IRX6P78412 446 aaPredicted RBP27.43■■□□□ 1.98
CAPN12-201ENST00000328867 HNRNPUQ00839 825 aaKnown RBP eCLIP27.43■■□□□ 1.98
CAPN12-201ENST00000328867 NOP58Q9Y2X3 529 aaKnown RBP27.43■■□□□ 1.98
CAPN12-201ENST00000328867 HIRIP3Q9BW71 556 aaPredicted RBP27.38■■□□□ 1.97
CAPN12-201ENST00000328867 ANO8Q9HCE9 1232 aaPredicted RBP27.35■■□□□ 1.97
CAPN12-201ENST00000328867 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
CAPN12-201ENST00000328867 CARMIL1Q5VZK9 1371 aa27.33■■□□□ 1.97
CAPN12-201ENST00000328867 MAP3K1Q13233 1512 aa27.31■■□□□ 1.96
CAPN12-201ENST00000328867 NBR1Q14596 966 aa27.29■■□□□ 1.96
CAPN12-201ENST00000328867 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
CAPN12-201ENST00000328867 TIAM1Q13009 1591 aa27.23■■□□□ 1.95
CAPN12-201ENST00000328867 PAK3O75914 559 aaPredicted RBP27.2■■□□□ 1.95
CAPN12-201ENST00000328867 RTL5Q5HYW3 569 aaPredicted RBP27.2■■□□□ 1.95
CAPN12-201ENST00000328867 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
CAPN12-201ENST00000328867 B4GALNT3Q6L9W6 998 aa27.18■■□□□ 1.94
CAPN12-201ENST00000328867 TONSLQ96HA7 1378 aa27.18■■□□□ 1.94
CAPN12-201ENST00000328867 TOPBP1Q92547 1522 aa27.18■■□□□ 1.94
CAPN12-201ENST00000328867 SALL2Q9Y467 1007 aaPredicted RBP27.14■■□□□ 1.94
CAPN12-201ENST00000328867 POLA1P09884 1462 aaPredicted RBP27.14■■□□□ 1.94
CAPN12-201ENST00000328867 LRRC9Q6ZRR7 1453 aa27.14■■□□□ 1.93
CAPN12-201ENST00000328867 FAM50AQ14320 339 aaKnown RBP27.13■■□□□ 1.93
CAPN12-201ENST00000328867 PHLDB1Q86UU1 1377 aa27.13■■□□□ 1.93
CAPN12-201ENST00000328867 RAD54L2Q9Y4B4 1467 aa27.12■■□□□ 1.93
CAPN12-201ENST00000328867 ANP32AP39687 249 aaKnown RBP27.11■■□□□ 1.93
CAPN12-201ENST00000328867 IPO9Q96P70 1041 aaKnown RBP27.11■■□□□ 1.93
CAPN12-201ENST00000328867 NESP48681 1621 aa27.11■■□□□ 1.93
CAPN12-201ENST00000328867 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
CAPN12-201ENST00000328867 CUL7Q14999 1698 aa27.08■■□□□ 1.93
CAPN12-201ENST00000328867 LAMC3Q9Y6N6 1575 aa27.06■■□□□ 1.92
CAPN12-201ENST00000328867 CFAP43Q8NDM7 1665 aa27.06■■□□□ 1.92
CAPN12-201ENST00000328867 ZBTB47Q9UFB7 747 aaPredicted RBP27.04■■□□□ 1.92
CAPN12-201ENST00000328867 ZBED9Q6R2W3 1325 aa27.03■■□□□ 1.92
CAPN12-201ENST00000328867 PCF11O94913 1555 aaKnown RBP27.02■■□□□ 1.92
CAPN12-201ENST00000328867 EFCAB5A4FU69 1503 aa27.01■■□□□ 1.91
CAPN12-201ENST00000328867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27■■□□□ 1.915e-6■■■□□ 14.6
CAPN12-201ENST00000328867 CTTNBP2Q8WZ74 1663 aa26.98■■□□□ 1.91
CAPN12-201ENST00000328867 IL27Q8NEV9 243 aa26.97■■□□□ 1.91
CAPN12-201ENST00000328867 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
CAPN12-201ENST00000328867 WASHC2AQ641Q2 1341 aa26.94■■□□□ 1.9
CAPN12-201ENST00000328867 FYCO1Q9BQS8 1478 aa26.93■■□□□ 1.9
CAPN12-201ENST00000328867 NCOA2Q15596 1464 aa26.92■■□□□ 1.9
CAPN12-201ENST00000328867 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.97e-8■■■■■ 28.1
CAPN12-201ENST00000328867 CNTLNQ9NXG0 1405 aa26.91■■□□□ 1.9
CAPN12-201ENST00000328867 FHOD3Q2V2M9 1422 aa26.91■■□□□ 1.9
CAPN12-201ENST00000328867 UACAQ9BZF9 1416 aa26.9■■□□□ 1.9
CAPN12-201ENST00000328867 ABCA5Q8WWZ7 1642 aa26.89■■□□□ 1.89
CAPN12-201ENST00000328867 CASKIN1Q8WXD9 1431 aa26.89■■□□□ 1.89
CAPN12-201ENST00000328867 CCDC184Q52MB2 194 aa26.87■■□□□ 1.89
CAPN12-201ENST00000328867 FAM9BQ8IZU0 186 aa26.87■■□□□ 1.89
CAPN12-201ENST00000328867 USP35Q9P2H5 1018 aa26.86■■□□□ 1.89
CAPN12-201ENST00000328867 CCDC18Q5T9S5 1454 aa26.86■■□□□ 1.89
CAPN12-201ENST00000328867 P3H3Q8IVL6 736 aa26.86■■□□□ 1.89
CAPN12-201ENST00000328867 UBE2Q2Q8WVN8 375 aa26.86■■□□□ 1.89
CAPN12-201ENST00000328867 KDM5BQ9UGL1 1544 aa26.85■■□□□ 1.89
CAPN12-201ENST00000328867 HSPA5P11021 654 aaKnown RBP26.85■■□□□ 1.89
CAPN12-201ENST00000328867 CCDC136Q96JN2 1154 aa26.85■■□□□ 1.89
CAPN12-201ENST00000328867 PRKRIP1Q9H875 184 aaPredicted RBP26.84■■□□□ 1.89
CAPN12-201ENST00000328867 MRS2Q9HD23 443 aa26.84■■□□□ 1.89
CAPN12-201ENST00000328867 PDS5BQ9NTI5 1447 aa26.83■■□□□ 1.89
CAPN12-201ENST00000328867 SMG6Q86US8 1419 aaKnown RBP26.82■■□□□ 1.88
CAPN12-201ENST00000328867 RTN4Q9NQC3 1192 aaKnown RBP26.81■■□□□ 1.88
CAPN12-201ENST00000328867 C11orf95C9JLR9 678 aaPredicted RBP26.81■■□□□ 1.88
CAPN12-201ENST00000328867 FMN1Q68DA7 1419 aa26.79■■□□□ 1.88
CAPN12-201ENST00000328867 EIF4G2P78344 907 aaKnown RBP eCLIP26.78■■□□□ 1.88
CAPN12-201ENST00000328867 RNF123Q5XPI4 1314 aa26.78■■□□□ 1.88
CAPN12-201ENST00000328867 HFM1A2PYH4 1435 aa26.78■■□□□ 1.88
CAPN12-201ENST00000328867 GAPVD1Q14C86 1478 aa26.77■■□□□ 1.88
CAPN12-201ENST00000328867 SAMD9Q5K651 1589 aa26.77■■□□□ 1.88
CAPN12-201ENST00000328867 WASHC2CQ9Y4E1 1318 aa26.75■■□□□ 1.87
CAPN12-201ENST00000328867 SNAPC4Q5SXM2 1469 aa26.75■■□□□ 1.87
CAPN12-201ENST00000328867 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
CAPN12-201ENST00000328867 TDRD9Q8NDG6 1382 aaKnown RBP26.74■■□□□ 1.87
CAPN12-201ENST00000328867 ATP1B4Q9UN42 357 aaPredicted RBP26.73■■□□□ 1.87
CAPN12-201ENST00000328867 PTPN23Q9H3S7 1636 aa26.72■■□□□ 1.87
CAPN12-201ENST00000328867 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.72■■□□□ 1.87
CAPN12-201ENST00000328867 NEFMP07197 916 aa26.71■■□□□ 1.87
CAPN12-201ENST00000328867 NUDCQ9Y266 331 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms