RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 CCNB3Q8WWL7 1395 aa15.54■□□□□ 0.08
CUL4A-201ENST00000326335 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
CUL4A-201ENST00000326335 CENPBP07199 599 aaPredicted RBP15.52■□□□□ 0.07
CUL4A-201ENST00000326335 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.07
CUL4A-201ENST00000326335 ACIN1Q9UKV3 1341 aaKnown RBP15.51■□□□□ 0.07
CUL4A-201ENST00000326335 RRP7BPQ9NSQ0 103 aa15.49■□□□□ 0.07
CUL4A-201ENST00000326335 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
CUL4A-201ENST00000326335 PHLDB1Q86UU1 1377 aa15.48■□□□□ 0.07
CUL4A-201ENST00000326335 DHX57Q6P158 1386 aaKnown RBP15.47■□□□□ 0.07
CUL4A-201ENST00000326335 AQRO60306 1485 aaKnown RBP eCLIP15.47■□□□□ 0.074e-6■■■□□ 15.2
CUL4A-201ENST00000326335 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
CUL4A-201ENST00000326335 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
CUL4A-201ENST00000326335 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.06
CUL4A-201ENST00000326335 RAB3GAP2Q9H2M9 1393 aa15.45■□□□□ 0.06
CUL4A-201ENST00000326335 ZNF777Q9ULD5 760 aaPredicted RBP15.43■□□□□ 0.06
CUL4A-201ENST00000326335 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
CUL4A-201ENST00000326335 DDX10Q13206 875 aaKnown RBP15.41■□□□□ 0.06
CUL4A-201ENST00000326335 FOXD1Q16676 465 aa15.4■□□□□ 0.06
CUL4A-201ENST00000326335 KCNH8Q96L42 1107 aa15.39■□□□□ 0.05
CUL4A-201ENST00000326335 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
CUL4A-201ENST00000326335 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
CUL4A-201ENST00000326335 CHMP7Q8WUX9 453 aaPredicted RBP15.35■□□□□ 0.05
CUL4A-201ENST00000326335 POLR3GLQ9BT43 218 aa15.33■□□□□ 0.04
CUL4A-201ENST00000326335 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
CUL4A-201ENST00000326335 LRRC9Q6ZRR7 1453 aa15.32■□□□□ 0.04
CUL4A-201ENST00000326335 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
CUL4A-201ENST00000326335 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
CUL4A-201ENST00000326335 ZNF326Q5BKZ1 582 aaKnown RBP15.3■□□□□ 0.04
CUL4A-201ENST00000326335 PCF11O94913 1555 aaKnown RBP15.3■□□□□ 0.04
CUL4A-201ENST00000326335 SETD5Q9C0A6 1442 aa15.28■□□□□ 0.04
CUL4A-201ENST00000326335 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
CUL4A-201ENST00000326335 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.04
CUL4A-201ENST00000326335 ZNF644Q9H582 1327 aaPredicted RBP15.27■□□□□ 0.03
CUL4A-201ENST00000326335 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.03
CUL4A-201ENST00000326335 ZNF608Q9ULD9 1512 aaPredicted RBP15.26■□□□□ 0.03
CUL4A-201ENST00000326335 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
CUL4A-201ENST00000326335 BCANQ96GW7 911 aa15.25■□□□□ 0.03
CUL4A-201ENST00000326335 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
CUL4A-201ENST00000326335 TONSLQ96HA7 1378 aa15.2■□□□□ 0.02
CUL4A-201ENST00000326335 FMN1Q68DA7 1419 aa15.19■□□□□ 0.02
CUL4A-201ENST00000326335 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
CUL4A-201ENST00000326335 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
CUL4A-201ENST00000326335 CASKIN1Q8WXD9 1431 aa15.15■□□□□ 0.02
CUL4A-201ENST00000326335 PTPRKQ15262 1439 aa15.14■□□□□ 0.01
CUL4A-201ENST00000326335 FGD6Q6ZV73 1430 aa15.14■□□□□ 0.01
CUL4A-201ENST00000326335 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
CUL4A-201ENST00000326335 CFDP1Q9UEE9 299 aaPredicted RBP15.1■□□□□ 0.01
CUL4A-201ENST00000326335 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
CUL4A-201ENST00000326335 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
CUL4A-201ENST00000326335 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
CUL4A-201ENST00000326335 FYCO1Q9BQS8 1478 aa15.08■□□□□ 0.01
CUL4A-201ENST00000326335 PPP1R15AO75807 674 aaPredicted RBP15.08■□□□□ 0
CUL4A-201ENST00000326335 WDR97A6NE52 1622 aa15.08■□□□□ 0
CUL4A-201ENST00000326335 SNAPC4Q5SXM2 1469 aa15.07■□□□□ 0
CUL4A-201ENST00000326335 KDM2AQ9Y2K7 1162 aa15.07■□□□□ 0
CUL4A-201ENST00000326335 MAPKBP1O60336 1514 aa15.06■□□□□ 0
CUL4A-201ENST00000326335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 02e-7■■□□□ 14.1
CUL4A-201ENST00000326335 MRC2Q9UBG0 1479 aa15.06■□□□□ 0
CUL4A-201ENST00000326335 CCDC18Q5T9S5 1454 aa15.06■□□□□ 0
CUL4A-201ENST00000326335 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ -0
CUL4A-201ENST00000326335 MYT1LQ9UL68 1186 aa15.05■□□□□ -0
CUL4A-201ENST00000326335 ANP32CO43423 234 aa15.04■□□□□ -0
CUL4A-201ENST00000326335 MPHOSPH9Q99550 1183 aa15.03■□□□□ -0
CUL4A-201ENST00000326335 MYOM3Q5VTT5 1437 aa15.03■□□□□ -0
CUL4A-201ENST00000326335 GRIN2BQ13224 1484 aa15.02■□□□□ -0
CUL4A-201ENST00000326335 CUL7Q14999 1698 aa15.02□□□□□ -0.01
CUL4A-201ENST00000326335 PRG4Q92954 1404 aaPredicted RBP15.01□□□□□ -0.01
CUL4A-201ENST00000326335 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
CUL4A-201ENST00000326335 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.011e-8■■■■■ 89.9
CUL4A-201ENST00000326335 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
CUL4A-201ENST00000326335 CTTNBP2Q8WZ74 1663 aa15□□□□□ -0.01
CUL4A-201ENST00000326335 PLEKHD1A6NEE1 506 aa15□□□□□ -0.01
CUL4A-201ENST00000326335 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
CUL4A-201ENST00000326335 MAGI3Q5TCQ9 1506 aa15□□□□□ -0.01
CUL4A-201ENST00000326335 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
CUL4A-201ENST00000326335 PLB1Q6P1J6 1458 aa14.99□□□□□ -0.01
CUL4A-201ENST00000326335 ABCA5Q8WWZ7 1642 aa14.99□□□□□ -0.01
CUL4A-201ENST00000326335 HSPA5P11021 654 aaKnown RBP14.97□□□□□ -0.01
CUL4A-201ENST00000326335 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
CUL4A-201ENST00000326335 EPRSP07814 1512 aaKnown RBP14.96□□□□□ -0.01
CUL4A-201ENST00000326335 THOC2Q8NI27 1593 aaKnown RBP14.96□□□□□ -0.01
CUL4A-201ENST00000326335 NAIPQ13075 1403 aa14.96□□□□□ -0.01
CUL4A-201ENST00000326335 TARBP1Q13395 1621 aaKnown RBP14.96□□□□□ -0.01
CUL4A-201ENST00000326335 IQGAP2Q13576 1575 aa14.95□□□□□ -0.02
CUL4A-201ENST00000326335 FAM9BQ8IZU0 186 aa14.95□□□□□ -0.02
CUL4A-201ENST00000326335 FKBP8Q14318 412 aa14.94□□□□□ -0.02
CUL4A-201ENST00000326335 HNRNPUQ00839 825 aaKnown RBP eCLIP14.92□□□□□ -0.02
CUL4A-201ENST00000326335 PKD2Q13563 968 aa14.92□□□□□ -0.02
CUL4A-201ENST00000326335 CFAP43Q8NDM7 1665 aa14.92□□□□□ -0.02
CUL4A-201ENST00000326335 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
CUL4A-201ENST00000326335 MAP3K1Q13233 1512 aa14.9□□□□□ -0.02
CUL4A-201ENST00000326335 TSPY4P0CV99 314 aa14.9□□□□□ -0.02
CUL4A-201ENST00000326335 TSPY10P0CW01 314 aa14.9□□□□□ -0.02
CUL4A-201ENST00000326335 EIF4G2P78344 907 aaKnown RBP eCLIP14.89□□□□□ -0.033e-7■■■■□ 20.7
CUL4A-201ENST00000326335 HFM1A2PYH4 1435 aa14.88□□□□□ -0.03
CUL4A-201ENST00000326335 LRRIQ1Q96JM4 1722 aa14.88□□□□□ -0.03
CUL4A-201ENST00000326335 NBPF8Q3BBV2 869 aa14.88□□□□□ -0.03
CUL4A-201ENST00000326335 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
CUL4A-201ENST00000326335 SUPT16HQ9Y5B9 1047 aaKnown RBP14.88□□□□□ -0.03
CUL4A-201ENST00000326335 UACAQ9BZF9 1416 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms