RNA–Protein interactions for RNA: ENST00000321407.2

GCC1-201, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCC1, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-201ENST00000321407 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
GCC1-201ENST00000321407 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
GCC1-201ENST00000321407 KDM2AQ9Y2K7 1162 aa20.66■□□□□ 0.9
GCC1-201ENST00000321407 BICRAQ9NZM4 1560 aa20.66■□□□□ 0.9
GCC1-201ENST00000321407 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
GCC1-201ENST00000321407 NEFLP07196 543 aa20.65■□□□□ 0.9
GCC1-201ENST00000321407 HIRIP3Q9BW71 556 aaPredicted RBP20.64■□□□□ 0.89
GCC1-201ENST00000321407 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
GCC1-201ENST00000321407 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
GCC1-201ENST00000321407 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
GCC1-201ENST00000321407 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
GCC1-201ENST00000321407 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
GCC1-201ENST00000321407 JPH4Q96JJ6 628 aa20.57■□□□□ 0.88
GCC1-201ENST00000321407 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
GCC1-201ENST00000321407 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
GCC1-201ENST00000321407 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
GCC1-201ENST00000321407 FHOD3Q2V2M9 1422 aa20.54■□□□□ 0.88
GCC1-201ENST00000321407 RGL3Q3MIN7 710 aa20.54■□□□□ 0.88
GCC1-201ENST00000321407 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.87
GCC1-201ENST00000321407 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
GCC1-201ENST00000321407 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
GCC1-201ENST00000321407 MYT1Q01538 1121 aa20.46■□□□□ 0.87
GCC1-201ENST00000321407 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
GCC1-201ENST00000321407 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
GCC1-201ENST00000321407 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
GCC1-201ENST00000321407 MLECQ14165 292 aa20.45■□□□□ 0.86
GCC1-201ENST00000321407 IGF1RP08069 1367 aa20.44■□□□□ 0.86
GCC1-201ENST00000321407 ANP32CO43423 234 aa20.44■□□□□ 0.86
GCC1-201ENST00000321407 DDX10Q13206 875 aaKnown RBP20.44■□□□□ 0.86
GCC1-201ENST00000321407 CARMIL2Q6F5E8 1435 aa20.43■□□□□ 0.86
GCC1-201ENST00000321407 SIN3AQ96ST3 1273 aa20.42■□□□□ 0.86
GCC1-201ENST00000321407 CFTRP13569 1480 aa20.4■□□□□ 0.86
GCC1-201ENST00000321407 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
GCC1-201ENST00000321407 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
GCC1-201ENST00000321407 FOXD1Q16676 465 aa20.33■□□□□ 0.84
GCC1-201ENST00000321407 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
GCC1-201ENST00000321407 GGT6Q6P531 493 aa20.29■□□□□ 0.84
GCC1-201ENST00000321407 FMN1Q68DA7 1419 aa20.28■□□□□ 0.84
GCC1-201ENST00000321407 SYNJ1O43426 1573 aa20.28■□□□□ 0.84
GCC1-201ENST00000321407 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.84
GCC1-201ENST00000321407 HNRNPMP52272 730 aaKnown RBP eCLIP20.26■□□□□ 0.83
GCC1-201ENST00000321407 SLC24A1O60721 1099 aa20.26■□□□□ 0.83
GCC1-201ENST00000321407 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
GCC1-201ENST00000321407 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
GCC1-201ENST00000321407 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
GCC1-201ENST00000321407 PTPRGP23470 1445 aa20.21■□□□□ 0.83
GCC1-201ENST00000321407 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
GCC1-201ENST00000321407 ARHGAP35Q9NRY4 1499 aa20.19■□□□□ 0.82
GCC1-201ENST00000321407 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
GCC1-201ENST00000321407 EFCAB2Q5VUJ9 269 aa20.18■□□□□ 0.82
GCC1-201ENST00000321407 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
GCC1-201ENST00000321407 CUX1P39880 1505 aa20.18■□□□□ 0.82
GCC1-201ENST00000321407 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
GCC1-201ENST00000321407 MRC2Q9UBG0 1479 aa20.13■□□□□ 0.81
GCC1-201ENST00000321407 BCL11AQ9H165 835 aa20.13■□□□□ 0.81
GCC1-201ENST00000321407 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
GCC1-201ENST00000321407 PKD2Q13563 968 aa20.1■□□□□ 0.81
GCC1-201ENST00000321407 ERICH6Q7L0X2 663 aa20.09■□□□□ 0.81
GCC1-201ENST00000321407 KIF3BO15066 747 aa20.08■□□□□ 0.81
GCC1-201ENST00000321407 TMC1Q8TDI8 760 aa20.08■□□□□ 0.81
GCC1-201ENST00000321407 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.8
GCC1-201ENST00000321407 C14orf37Q86TY3 774 aa20.07■□□□□ 0.8
GCC1-201ENST00000321407 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
GCC1-201ENST00000321407 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
GCC1-201ENST00000321407 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
GCC1-201ENST00000321407 RAB3GAP2Q9H2M9 1393 aa20.03■□□□□ 0.8
GCC1-201ENST00000321407 MIER1Q8N108 512 aa20.03■□□□□ 0.8
GCC1-201ENST00000321407 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.79
GCC1-201ENST00000321407 NUP155O75694 1391 aa20.01■□□□□ 0.79
GCC1-201ENST00000321407 SETD5Q9C0A6 1442 aa20.01■□□□□ 0.79
GCC1-201ENST00000321407 HNRNPUQ00839 825 aaKnown RBP eCLIP20■□□□□ 0.79
GCC1-201ENST00000321407 SPAG9O60271 1321 aaKnown RBP20■□□□□ 0.79
GCC1-201ENST00000321407 ZBTB7CA1YPR0 619 aa19.98■□□□□ 0.79
GCC1-201ENST00000321407 NUTM2DQ5VT03 806 aaPredicted RBP19.98■□□□□ 0.79
GCC1-201ENST00000321407 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
GCC1-201ENST00000321407 MPHOSPH9Q99550 1183 aa19.97■□□□□ 0.79
GCC1-201ENST00000321407 NEFMP07197 916 aa19.97■□□□□ 0.79
GCC1-201ENST00000321407 CCDC18Q5T9S5 1454 aa19.96■□□□□ 0.79
GCC1-201ENST00000321407 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.79
GCC1-201ENST00000321407 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
GCC1-201ENST00000321407 MRS2Q9HD23 443 aa19.95■□□□□ 0.78
GCC1-201ENST00000321407 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
GCC1-201ENST00000321407 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
GCC1-201ENST00000321407 ARAP1Q96P48 1450 aa19.93■□□□□ 0.78
GCC1-201ENST00000321407 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
GCC1-201ENST00000321407 ANKRD30AQ9BXX3 1397 aa19.91■□□□□ 0.78
GCC1-201ENST00000321407 STK26Q9P289 416 aa19.91■□□□□ 0.78
GCC1-201ENST00000321407 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
GCC1-201ENST00000321407 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
GCC1-201ENST00000321407 KANK1Q14678 1352 aa19.9■□□□□ 0.78
GCC1-201ENST00000321407 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
GCC1-201ENST00000321407 POGKQ9P215 609 aa19.89■□□□□ 0.77
GCC1-201ENST00000321407 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
GCC1-201ENST00000321407 KIF21BO75037 1637 aa19.88■□□□□ 0.77
GCC1-201ENST00000321407 CANXP27824 592 aaKnown RBP19.87■□□□□ 0.77
GCC1-201ENST00000321407 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
GCC1-201ENST00000321407 TNNT2P45379 298 aaPredicted RBP19.87■□□□□ 0.77
GCC1-201ENST00000321407 PPM1GO15355 546 aaPredicted RBP19.86■□□□□ 0.77
GCC1-201ENST00000321407 WASHC2CQ9Y4E1 1318 aa19.86■□□□□ 0.77
GCC1-201ENST00000321407 LMOD2Q6P5Q4 547 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms