RNA–Protein interactions for RNA: ENST00000321407.2

GCC1-201, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCC1, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-201ENST00000321407 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
GCC1-201ENST00000321407 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
GCC1-201ENST00000321407 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
GCC1-201ENST00000321407 SUPT5HO00267 1087 aaKnown RBP25.61■■□□□ 1.69
GCC1-201ENST00000321407 EHMT2Q96KQ7 1210 aa24.62■■□□□ 1.53
GCC1-201ENST00000321407 ABCC9O60706 1549 aa24.3■■□□□ 1.48
GCC1-201ENST00000321407 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
GCC1-201ENST00000321407 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
GCC1-201ENST00000321407 RANGAP1P46060 587 aaPredicted RBP23.65■■□□□ 1.38
GCC1-201ENST00000321407 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
GCC1-201ENST00000321407 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
GCC1-201ENST00000321407 APLP2Q06481 763 aa23.19■■□□□ 1.3
GCC1-201ENST00000321407 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
GCC1-201ENST00000321407 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
GCC1-201ENST00000321407 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
GCC1-201ENST00000321407 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
GCC1-201ENST00000321407 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
GCC1-201ENST00000321407 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
GCC1-201ENST00000321407 CCDC180Q9P1Z9 1646 aa22.98■■□□□ 1.27
GCC1-201ENST00000321407 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
GCC1-201ENST00000321407 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
GCC1-201ENST00000321407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
GCC1-201ENST00000321407 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
GCC1-201ENST00000321407 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.18
GCC1-201ENST00000321407 ITGAEP38570 1179 aa22.37■■□□□ 1.17
GCC1-201ENST00000321407 FBLN2P98095 1184 aa22.37■■□□□ 1.17
GCC1-201ENST00000321407 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
GCC1-201ENST00000321407 NACADO15069 1562 aa22.27■■□□□ 1.16
GCC1-201ENST00000321407 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
GCC1-201ENST00000321407 RSF1Q96T23 1441 aaPredicted RBP22.12■■□□□ 1.13
GCC1-201ENST00000321407 HRCP23327 699 aa22.12■■□□□ 1.13
GCC1-201ENST00000321407 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
GCC1-201ENST00000321407 MYT1LQ9UL68 1186 aa22.1■■□□□ 1.13
GCC1-201ENST00000321407 ARID3CA6NKF2 412 aa22.08■■□□□ 1.13
GCC1-201ENST00000321407 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
GCC1-201ENST00000321407 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
GCC1-201ENST00000321407 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
GCC1-201ENST00000321407 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.08
GCC1-201ENST00000321407 FAM50AQ14320 339 aaKnown RBP21.82■■□□□ 1.08
GCC1-201ENST00000321407 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
GCC1-201ENST00000321407 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
GCC1-201ENST00000321407 ZEB1P37275 1124 aaPredicted RBP21.64■■□□□ 1.05
GCC1-201ENST00000321407 POLR3GLQ9BT43 218 aa21.54■■□□□ 1.04
GCC1-201ENST00000321407 CNGB1Q14028 1251 aaPredicted RBP21.54■■□□□ 1.04
GCC1-201ENST00000321407 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
GCC1-201ENST00000321407 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
GCC1-201ENST00000321407 ZNF777Q9ULD5 760 aaPredicted RBP21.5■■□□□ 1.03
GCC1-201ENST00000321407 TRIM52Q96A61 297 aa21.49■■□□□ 1.03
GCC1-201ENST00000321407 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
GCC1-201ENST00000321407 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
GCC1-201ENST00000321407 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
GCC1-201ENST00000321407 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
GCC1-201ENST00000321407 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.01
GCC1-201ENST00000321407 WIZO95785 1651 aa21.38■■□□□ 1.01
GCC1-201ENST00000321407 PELP1Q8IZL8 1130 aaKnown RBP21.26■□□□□ 0.99
GCC1-201ENST00000321407 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
GCC1-201ENST00000321407 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
GCC1-201ENST00000321407 SOGA1O94964 1423 aa21.24■□□□□ 0.99
GCC1-201ENST00000321407 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
GCC1-201ENST00000321407 CENPBP07199 599 aaPredicted RBP21.22■□□□□ 0.99
GCC1-201ENST00000321407 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
GCC1-201ENST00000321407 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
GCC1-201ENST00000321407 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
GCC1-201ENST00000321407 CLIP1P30622 1438 aa21.2■□□□□ 0.98
GCC1-201ENST00000321407 NPM1P06748 294 aaKnown RBP eCLIP21.18■□□□□ 0.98
GCC1-201ENST00000321407 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
GCC1-201ENST00000321407 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
GCC1-201ENST00000321407 KCNH8Q96L42 1107 aa21.15■□□□□ 0.98
GCC1-201ENST00000321407 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
GCC1-201ENST00000321407 CUX2O14529 1486 aa21.14■□□□□ 0.97
GCC1-201ENST00000321407 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
GCC1-201ENST00000321407 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
GCC1-201ENST00000321407 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.97
GCC1-201ENST00000321407 CEP162Q5TB80 1403 aa21.07■□□□□ 0.96
GCC1-201ENST00000321407 MTUS2Q5JR59 1369 aa21.05■□□□□ 0.96
GCC1-201ENST00000321407 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
GCC1-201ENST00000321407 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
GCC1-201ENST00000321407 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
GCC1-201ENST00000321407 DNAJC5BQ9UF47 199 aa21.02■□□□□ 0.95
GCC1-201ENST00000321407 CARMIL1Q5VZK9 1371 aa21■□□□□ 0.95
GCC1-201ENST00000321407 EEA1Q15075 1411 aa21■□□□□ 0.95
GCC1-201ENST00000321407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.97■□□□□ 0.95
GCC1-201ENST00000321407 CEP164Q9UPV0 1460 aa20.92■□□□□ 0.94
GCC1-201ENST00000321407 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
GCC1-201ENST00000321407 RRP7BPQ9NSQ0 103 aa20.89■□□□□ 0.93
GCC1-201ENST00000321407 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
GCC1-201ENST00000321407 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
GCC1-201ENST00000321407 CHGAP10645 457 aaKnown RBP20.88■□□□□ 0.93
GCC1-201ENST00000321407 TNIKQ9UKE5 1360 aa20.88■□□□□ 0.93
GCC1-201ENST00000321407 BCANQ96GW7 911 aa20.86■□□□□ 0.93
GCC1-201ENST00000321407 TSPY4P0CV99 314 aa20.83■□□□□ 0.93
GCC1-201ENST00000321407 TSPY10P0CW01 314 aa20.83■□□□□ 0.93
GCC1-201ENST00000321407 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.93
GCC1-201ENST00000321407 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
GCC1-201ENST00000321407 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
GCC1-201ENST00000321407 ESF1Q9H501 851 aaKnown RBP20.79■□□□□ 0.92
GCC1-201ENST00000321407 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
GCC1-201ENST00000321407 CFDP1Q9UEE9 299 aaPredicted RBP20.74■□□□□ 0.91
GCC1-201ENST00000321407 NESP48681 1621 aa20.73■□□□□ 0.91
GCC1-201ENST00000321407 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms