RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 PRR29P0C7W0 189 aa5.84□□□□□ -1.48
SCAMP1-201ENST00000320280 SPDYE1Q8NFV5 336 aaPredicted RBP5.84□□□□□ -1.48
SCAMP1-201ENST00000320280 CCDC88BA6NC98 1476 aa5.84□□□□□ -1.48
SCAMP1-201ENST00000320280 ABCC8Q09428 1581 aa5.83□□□□□ -1.48
SCAMP1-201ENST00000320280 CADPSQ9ULU8 1353 aa5.82□□□□□ -1.48
SCAMP1-201ENST00000320280 PDS5BQ9NTI5 1447 aa5.81□□□□□ -1.48
SCAMP1-201ENST00000320280 EVX2Q03828 476 aa5.8□□□□□ -1.48
SCAMP1-201ENST00000320280 BIVM-ERCC5R4GMW8 1640 aa5.79□□□□□ -1.48
SCAMP1-201ENST00000320280 KIF21AQ7Z4S6 1674 aa5.78□□□□□ -1.48
SCAMP1-201ENST00000320280 THOC2Q8NI27 1593 aaKnown RBP5.78□□□□□ -1.48
SCAMP1-201ENST00000320280 WDR62O43379 1518 aa5.78□□□□□ -1.48
SCAMP1-201ENST00000320280 SPDYE4A6NLX3 237 aa5.78□□□□□ -1.48
SCAMP1-201ENST00000320280 DNMBPQ6XZF7 1577 aa5.77□□□□□ -1.49
SCAMP1-201ENST00000320280 CEP164Q9UPV0 1460 aa5.77□□□□□ -1.49
SCAMP1-201ENST00000320280 SSUH2Q9Y2M2 353 aa5.77□□□□□ -1.49
SCAMP1-201ENST00000320280 CUX2O14529 1486 aa5.76□□□□□ -1.49
SCAMP1-201ENST00000320280 MRC2Q9UBG0 1479 aa5.75□□□□□ -1.49
SCAMP1-201ENST00000320280 FXR2P51116 673 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCAMP1-201ENST00000320280 SP7Q8TDD2 431 aaPredicted RBP5.75□□□□□ -1.49
SCAMP1-201ENST00000320280 FANCD2Q9BXW9 1451 aa5.75□□□□□ -1.49
SCAMP1-201ENST00000320280 TOP2BQ02880 1626 aa5.75□□□□□ -1.49
SCAMP1-201ENST00000320280 ERCC6Q03468 1493 aa5.7□□□□□ -1.5
SCAMP1-201ENST00000320280 TOPBP1Q92547 1522 aa5.69□□□□□ -1.5
SCAMP1-201ENST00000320280 NESP48681 1621 aa5.68□□□□□ -1.5
SCAMP1-201ENST00000320280 IFT140Q96RY7 1462 aa5.68□□□□□ -1.5
SCAMP1-201ENST00000320280 SUPT5HO00267 1087 aaKnown RBP5.67□□□□□ -1.5
SCAMP1-201ENST00000320280 CD44P16070 742 aaKnown RBP5.67□□□□□ -1.5
SCAMP1-201ENST00000320280 URB2Q14146 1524 aaKnown RBP5.67□□□□□ -1.5
SCAMP1-201ENST00000320280 TARBP1Q13395 1621 aaKnown RBP5.67□□□□□ -1.5
SCAMP1-201ENST00000320280 CUX1P39880 1505 aa5.67□□□□□ -1.5
SCAMP1-201ENST00000320280 WRNQ14191 1432 aaPredicted RBP eCLIP5.67□□□□□ -1.5
SCAMP1-201ENST00000320280 EEA1Q15075 1411 aa5.66□□□□□ -1.5
SCAMP1-201ENST00000320280 ABCA10Q8WWZ4 1543 aa5.66□□□□□ -1.5
SCAMP1-201ENST00000320280 FKBP8Q14318 412 aa5.65□□□□□ -1.5
SCAMP1-201ENST00000320280 FARP1Q9Y4F1 1045 aaPredicted RBP5.65□□□□□ -1.5
SCAMP1-201ENST00000320280 ABCA5Q8WWZ7 1642 aa5.65□□□□□ -1.5
SCAMP1-201ENST00000320280 SYNJ1O43426 1573 aa5.65□□□□□ -1.51
SCAMP1-201ENST00000320280 CUL7Q14999 1698 aa5.65□□□□□ -1.51
SCAMP1-201ENST00000320280 PBRM1Q86U86 1689 aa5.64□□□□□ -1.51
SCAMP1-201ENST00000320280 ERICH3Q5RHP9 1530 aa5.63□□□□□ -1.51
SCAMP1-201ENST00000320280 ZRANB1Q9UGI0 708 aa5.63□□□□□ -1.51
SCAMP1-201ENST00000320280 POLA1P09884 1462 aaPredicted RBP5.63□□□□□ -1.51
SCAMP1-201ENST00000320280 MIER1Q8N108 512 aa5.62□□□□□ -1.51
SCAMP1-201ENST00000320280 TSPYL2Q9H2G4 693 aaPredicted RBP5.62□□□□□ -1.51
SCAMP1-201ENST00000320280 FGD5Q6ZNL6 1462 aa5.62□□□□□ -1.51
SCAMP1-201ENST00000320280 GABBR2O75899 941 aa5.6□□□□□ -1.51
SCAMP1-201ENST00000320280 EIF4G3O43432 1585 aaKnown RBP5.6□□□□□ -1.51
SCAMP1-201ENST00000320280 PLCD3Q8N3E9 789 aa5.6□□□□□ -1.51
SCAMP1-201ENST00000320280 MAGI1Q96QZ7 1491 aaPredicted RBP5.6□□□□□ -1.51
SCAMP1-201ENST00000320280 STAG3Q9UJ98 1225 aa5.59□□□□□ -1.52
SCAMP1-201ENST00000320280 KIF21BO75037 1637 aa5.58□□□□□ -1.52
SCAMP1-201ENST00000320280 GRIN2BQ13224 1484 aa5.57□□□□□ -1.52
SCAMP1-201ENST00000320280 DCBLD2Q96PD2 775 aa5.57□□□□□ -1.52
SCAMP1-201ENST00000320280 PHF12Q96QT6 1004 aa5.57□□□□□ -1.52
SCAMP1-201ENST00000320280 SOGA1O94964 1423 aa5.57□□□□□ -1.52
SCAMP1-201ENST00000320280 ADAMTS12P58397 1594 aa5.57□□□□□ -1.52
SCAMP1-201ENST00000320280 C19orf67A6NJJ6 358 aa5.57□□□□□ -1.52
SCAMP1-201ENST00000320280 KIF27Q86VH2 1401 aa5.57□□□□□ -1.52
SCAMP1-201ENST00000320280 CREBZFQ9NS37 354 aa5.57□□□□□ -1.52
SCAMP1-201ENST00000320280 PAK3O75914 559 aaPredicted RBP5.56□□□□□ -1.52
SCAMP1-201ENST00000320280 GAPVD1Q14C86 1478 aa5.55□□□□□ -1.52
SCAMP1-201ENST00000320280 CTTNBP2Q8WZ74 1663 aa5.54□□□□□ -1.52
SCAMP1-201ENST00000320280 GALR2O43603 387 aaPredicted RBP5.54□□□□□ -1.52
SCAMP1-201ENST00000320280 PLEKHG5O94827 1062 aa5.53□□□□□ -1.52
SCAMP1-201ENST00000320280 FHAD1B1AJZ9 1412 aa5.53□□□□□ -1.52
SCAMP1-201ENST00000320280 SYNJ2O15056 1496 aa5.53□□□□□ -1.52
SCAMP1-201ENST00000320280 CHD1O14646 1710 aa5.51□□□□□ -1.53
SCAMP1-201ENST00000320280 SHROOM2Q13796 1616 aa5.51□□□□□ -1.53
SCAMP1-201ENST00000320280 PRXQ9BXM0 1461 aa5.51□□□□□ -1.53
SCAMP1-201ENST00000320280 RAD54L2Q9Y4B4 1467 aa5.5□□□□□ -1.53
SCAMP1-201ENST00000320280 KLHL34Q8N239 644 aa5.5□□□□□ -1.53
SCAMP1-201ENST00000320280 NPM1P06748 294 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCAMP1-201ENST00000320280 CLASP1Q7Z460 1538 aa5.49□□□□□ -1.53
SCAMP1-201ENST00000320280 RAPGEF2Q9Y4G8 1499 aa5.49□□□□□ -1.53
SCAMP1-201ENST00000320280 RUSC2Q8N2Y8 1516 aa5.49□□□□□ -1.53
SCAMP1-201ENST00000320280 SNAPC4Q5SXM2 1469 aa5.49□□□□□ -1.53
SCAMP1-201ENST00000320280 NUP160Q12769 1436 aa5.48□□□□□ -1.53
SCAMP1-201ENST00000320280 GRIN2AQ12879 1464 aa5.48□□□□□ -1.53
SCAMP1-201ENST00000320280 TRIM41Q8WV44 630 aa5.48□□□□□ -1.53
SCAMP1-201ENST00000320280 EFCAB5A4FU69 1503 aa5.48□□□□□ -1.53
SCAMP1-201ENST00000320280 ZNF608Q9ULD9 1512 aaPredicted RBP5.48□□□□□ -1.53
SCAMP1-201ENST00000320280 GOLGA3Q08378 1498 aa5.47□□□□□ -1.53
SCAMP1-201ENST00000320280 IGF1RP08069 1367 aa5.46□□□□□ -1.54
SCAMP1-201ENST00000320280 UGGT2Q9NYU1 1516 aa5.46□□□□□ -1.54
SCAMP1-201ENST00000320280 POTEIP0CG38 1075 aa5.45□□□□□ -1.54
SCAMP1-201ENST00000320280 MS4A3Q96HJ5 214 aa5.45□□□□□ -1.54
SCAMP1-201ENST00000320280 KIAA0586Q9BVV6 1533 aa5.45□□□□□ -1.54
SCAMP1-201ENST00000320280 IQGAP2Q13576 1575 aa5.45□□□□□ -1.54
SCAMP1-201ENST00000320280 RASEFQ8IZ41 740 aa5.45□□□□□ -1.54
SCAMP1-201ENST00000320280 SAMD9Q5K651 1589 aa5.45□□□□□ -1.54
SCAMP1-201ENST00000320280 AQRO60306 1485 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCAMP1-201ENST00000320280 LHX8Q68G74 356 aa5.44□□□□□ -1.54
SCAMP1-201ENST00000320280 CEP170Q5SW79 1584 aa5.44□□□□□ -1.54
SCAMP1-201ENST00000320280 CARMIL1Q5VZK9 1371 aa5.44□□□□□ -1.54
SCAMP1-201ENST00000320280 MNX1P50219 401 aaPredicted RBP5.43□□□□□ -1.54
SCAMP1-201ENST00000320280 DCAF8Q5TAQ9 597 aa5.42□□□□□ -1.54
SCAMP1-201ENST00000320280 TDRD9Q8NDG6 1382 aaKnown RBP5.42□□□□□ -1.54
SCAMP1-201ENST00000320280 TRPC6Q9Y210 931 aa5.42□□□□□ -1.54
SCAMP1-201ENST00000320280 MAP3K13O43283 966 aa5.41□□□□□ -1.54
SCAMP1-201ENST00000320280 ZNF579Q8NAF0 562 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms