RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.11
CLK4-201ENST00000316308 SCAF1Q9H7N4 1312 aaKnown RBP21.95■■□□□ 1.1
CLK4-201ENST00000316308 PHLDB1Q86UU1 1377 aa21.94■■□□□ 1.1
CLK4-201ENST00000316308 PCF11O94913 1555 aaKnown RBP21.94■■□□□ 1.1
CLK4-201ENST00000316308 LRRC9Q6ZRR7 1453 aa21.91■■□□□ 1.1
CLK4-201ENST00000316308 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
CLK4-201ENST00000316308 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
CLK4-201ENST00000316308 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
CLK4-201ENST00000316308 NEUROD1Q13562 356 aa21.86■■□□□ 1.09
CLK4-201ENST00000316308 CUL7Q14999 1698 aa21.85■■□□□ 1.09
CLK4-201ENST00000316308 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
CLK4-201ENST00000316308 ABCA5Q8WWZ7 1642 aa21.85■■□□□ 1.09
CLK4-201ENST00000316308 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
CLK4-201ENST00000316308 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
CLK4-201ENST00000316308 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
CLK4-201ENST00000316308 RAB3GAP2Q9H2M9 1393 aa21.8■■□□□ 1.08
CLK4-201ENST00000316308 MIER1Q8N108 512 aa21.79■■□□□ 1.08
CLK4-201ENST00000316308 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.081e-8■■■□□ 18.8
CLK4-201ENST00000316308 CFAP43Q8NDM7 1665 aa21.77■■□□□ 1.08
CLK4-201ENST00000316308 TARBP1Q13395 1621 aaKnown RBP21.76■■□□□ 1.07
CLK4-201ENST00000316308 CASKIN1Q8WXD9 1431 aa21.75■■□□□ 1.07
CLK4-201ENST00000316308 EFCAB5A4FU69 1503 aa21.74■■□□□ 1.07
CLK4-201ENST00000316308 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
CLK4-201ENST00000316308 YTHDC1Q96MU7 727 aaKnown RBP21.73■■□□□ 1.07
CLK4-201ENST00000316308 FYCO1Q9BQS8 1478 aa21.73■■□□□ 1.07
CLK4-201ENST00000316308 SNAPC4Q5SXM2 1469 aa21.72■■□□□ 1.07
CLK4-201ENST00000316308 CLSPNQ9HAW4 1339 aa21.7■■□□□ 1.06
CLK4-201ENST00000316308 LRRIQ1Q96JM4 1722 aa21.69■■□□□ 1.06
CLK4-201ENST00000316308 MAPKBP1O60336 1514 aa21.68■■□□□ 1.06
CLK4-201ENST00000316308 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
CLK4-201ENST00000316308 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
CLK4-201ENST00000316308 FMN1Q68DA7 1419 aa21.66■■□□□ 1.06
CLK4-201ENST00000316308 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
CLK4-201ENST00000316308 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
CLK4-201ENST00000316308 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
CLK4-201ENST00000316308 MTUS2Q5JR59 1369 aa21.61■■□□□ 1.05
CLK4-201ENST00000316308 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
CLK4-201ENST00000316308 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
CLK4-201ENST00000316308 GRIN2BQ13224 1484 aa21.58■■□□□ 1.05
CLK4-201ENST00000316308 PTPRKQ15262 1439 aa21.58■■□□□ 1.05
CLK4-201ENST00000316308 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
CLK4-201ENST00000316308 MAGI3Q5TCQ9 1506 aa21.55■■□□□ 1.04
CLK4-201ENST00000316308 GTF3C3Q9Y5Q9 886 aa21.55■■□□□ 1.04
CLK4-201ENST00000316308 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
CLK4-201ENST00000316308 NCOA2Q15596 1464 aa21.52■■□□□ 1.04
CLK4-201ENST00000316308 CENPBP07199 599 aaPredicted RBP21.51■■□□□ 1.03
CLK4-201ENST00000316308 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
CLK4-201ENST00000316308 CDK13Q14004 1512 aaKnown RBP21.46■■□□□ 1.03
CLK4-201ENST00000316308 CHIC2Q9UKJ5 165 aa21.43■■□□□ 1.02
CLK4-201ENST00000316308 MYOM3Q5VTT5 1437 aa21.43■■□□□ 1.02
CLK4-201ENST00000316308 HIRIP3Q9BW71 556 aaPredicted RBP21.43■■□□□ 1.02
CLK4-201ENST00000316308 WDR62O43379 1518 aa21.42■■□□□ 1.02
CLK4-201ENST00000316308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.41■■□□□ 1.02
CLK4-201ENST00000316308 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
CLK4-201ENST00000316308 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.01
CLK4-201ENST00000316308 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.01
CLK4-201ENST00000316308 SUPT6HQ7KZ85 1726 aaKnown RBP21.38■■□□□ 1.01
CLK4-201ENST00000316308 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
CLK4-201ENST00000316308 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
CLK4-201ENST00000316308 EHBP1L1Q8N3D4 1523 aa21.37■■□□□ 1.01
CLK4-201ENST00000316308 UGGT2Q9NYU1 1516 aa21.37■■□□□ 1.01
CLK4-201ENST00000316308 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
CLK4-201ENST00000316308 FBLN2P98095 1184 aa21.36■■□□□ 1.01
CLK4-201ENST00000316308 THOC2Q8NI27 1593 aaKnown RBP21.35■■□□□ 1.01
CLK4-201ENST00000316308 NAIPQ13075 1403 aa21.35■■□□□ 1.01
CLK4-201ENST00000316308 ARHGEF11O15085 1522 aa21.34■■□□□ 1.01
CLK4-201ENST00000316308 PTPN23Q9H3S7 1636 aa21.34■■□□□ 1.01
CLK4-201ENST00000316308 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
CLK4-201ENST00000316308 HFM1A2PYH4 1435 aa21.34■■□□□ 1.01
CLK4-201ENST00000316308 KCNH8Q96L42 1107 aa21.33■■□□□ 1
CLK4-201ENST00000316308 HECW1Q76N89 1606 aa21.32■■□□□ 1
CLK4-201ENST00000316308 GRIN2AQ12879 1464 aa21.3■■□□□ 1
CLK4-201ENST00000316308 KIAA0586Q9BVV6 1533 aa21.28■■□□□ 1
CLK4-201ENST00000316308 ZNF644Q9H582 1327 aaPredicted RBP21.28■■□□□ 1
CLK4-201ENST00000316308 PPP1R15AO75807 674 aaPredicted RBP21.28■■□□□ 1
CLK4-201ENST00000316308 CHMP7Q8WUX9 453 aaPredicted RBP21.27■□□□□ 0.99
CLK4-201ENST00000316308 KDM6BO15054 1643 aa21.26■□□□□ 0.99
CLK4-201ENST00000316308 KIAA0556O60303 1618 aa21.26■□□□□ 0.99
CLK4-201ENST00000316308 DDX10Q13206 875 aaKnown RBP21.25■□□□□ 0.99
CLK4-201ENST00000316308 UACAQ9BZF9 1416 aa21.25■□□□□ 0.99
CLK4-201ENST00000316308 NUP153P49790 1475 aaKnown RBP21.24■□□□□ 0.99
CLK4-201ENST00000316308 CEP170Q5SW79 1584 aa21.22■□□□□ 0.99
CLK4-201ENST00000316308 FOXD1Q16676 465 aa21.21■□□□□ 0.99
CLK4-201ENST00000316308 DENND4BO75064 1496 aaPredicted RBP21.21■□□□□ 0.99
CLK4-201ENST00000316308 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
CLK4-201ENST00000316308 PLB1Q6P1J6 1458 aa21.19■□□□□ 0.98
CLK4-201ENST00000316308 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
CLK4-201ENST00000316308 TONSLQ96HA7 1378 aa21.17■□□□□ 0.98
CLK4-201ENST00000316308 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
CLK4-201ENST00000316308 RAPGEF6Q8TEU7 1601 aa21.14■□□□□ 0.97
CLK4-201ENST00000316308 SYNJ2O15056 1496 aa21.14■□□□□ 0.97
CLK4-201ENST00000316308 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
CLK4-201ENST00000316308 TIMELESSQ9UNS1 1208 aa21.12■□□□□ 0.97
CLK4-201ENST00000316308 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
CLK4-201ENST00000316308 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
CLK4-201ENST00000316308 MIA2Q96PC5 1412 aa21.11■□□□□ 0.97
CLK4-201ENST00000316308 ABCC5O15440 1437 aa21.07■□□□□ 0.96
CLK4-201ENST00000316308 MPHOSPH9Q99550 1183 aa21.07■□□□□ 0.96
CLK4-201ENST00000316308 ZNF777Q9ULD5 760 aaPredicted RBP21.07■□□□□ 0.96
CLK4-201ENST00000316308 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms