RNA–Protein interactions for RNA: ENST00000316084.9

RPS4X-201, Transcript of ribosomal protein S4 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS4X, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-201ENST00000316084 COL17A1Q9UMD9 1497 aaPredicted RBP15.02■□□□□ -0
RPS4X-201ENST00000316084 PCF11O94913 1555 aaKnown RBP15.01□□□□□ -0.01
RPS4X-201ENST00000316084 SHROOM2Q13796 1616 aa15□□□□□ -0.01
RPS4X-201ENST00000316084 SOGA1O94964 1423 aa14.98□□□□□ -0.01
RPS4X-201ENST00000316084 ADCY10Q96PN6 1610 aa14.93□□□□□ -0.02
RPS4X-201ENST00000316084 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
RPS4X-201ENST00000316084 PTPRMP28827 1452 aa14.9□□□□□ -0.02
RPS4X-201ENST00000316084 NUP160Q12769 1436 aa14.86□□□□□ -0.03
RPS4X-201ENST00000316084 GRIN2AQ12879 1464 aa14.85□□□□□ -0.03
RPS4X-201ENST00000316084 PRG4Q92954 1404 aaPredicted RBP14.84□□□□□ -0.03
RPS4X-201ENST00000316084 HSPA2P54652 639 aa14.84□□□□□ -0.03
RPS4X-201ENST00000316084 KIF21BO75037 1637 aa14.83□□□□□ -0.04
RPS4X-201ENST00000316084 GLI2P10070 1586 aa14.81□□□□□ -0.04
RPS4X-201ENST00000316084 ADAMTSL3P82987 1691 aa14.78□□□□□ -0.04
RPS4X-201ENST00000316084 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
RPS4X-201ENST00000316084 FGD5Q6ZNL6 1462 aa14.77□□□□□ -0.04
RPS4X-201ENST00000316084 MED1Q15648 1581 aaPredicted RBP14.73□□□□□ -0.05
RPS4X-201ENST00000316084 TEX14Q8IWB6 1497 aa14.71□□□□□ -0.06
RPS4X-201ENST00000316084 MAP3K4Q9Y6R4 1608 aa14.69□□□□□ -0.06
RPS4X-201ENST00000316084 JPH4Q96JJ6 628 aa14.68□□□□□ -0.06
RPS4X-201ENST00000316084 ABCA5Q8WWZ7 1642 aa14.65□□□□□ -0.06
RPS4X-201ENST00000316084 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
RPS4X-201ENST00000316084 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
RPS4X-201ENST00000316084 MADDQ8WXG6 1647 aa14.64□□□□□ -0.07
RPS4X-201ENST00000316084 PLB1Q6P1J6 1458 aa14.63□□□□□ -0.07
RPS4X-201ENST00000316084 CCDC88BA6NC98 1476 aa14.63□□□□□ -0.07
RPS4X-201ENST00000316084 BCORL1Q5H9F3 1711 aa14.58□□□□□ -0.07
RPS4X-201ENST00000316084 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
RPS4X-201ENST00000316084 KIAA0586Q9BVV6 1533 aa14.57□□□□□ -0.08
RPS4X-201ENST00000316084 EPRSP07814 1512 aaKnown RBP14.56□□□□□ -0.08
RPS4X-201ENST00000316084 RIMS1Q86UR5 1692 aaKnown RBP14.55□□□□□ -0.08
RPS4X-201ENST00000316084 PHF23Q9BUL5 403 aaPredicted RBP14.55□□□□□ -0.08
RPS4X-201ENST00000316084 ABCC2Q92887 1545 aa14.53□□□□□ -0.08
RPS4X-201ENST00000316084 CUL7Q14999 1698 aa14.53□□□□□ -0.08
RPS4X-201ENST00000316084 STRCQ7RTU9 1775 aa14.53□□□□□ -0.08
RPS4X-201ENST00000316084 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.08
RPS4X-201ENST00000316084 CUX1P39880 1505 aa14.52□□□□□ -0.09
RPS4X-201ENST00000316084 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
RPS4X-201ENST00000316084 FHAD1B1AJZ9 1412 aa14.5□□□□□ -0.09
RPS4X-201ENST00000316084 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
RPS4X-201ENST00000316084 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
RPS4X-201ENST00000316084 YEATS2Q9ULM3 1422 aa14.49□□□□□ -0.09
RPS4X-201ENST00000316084 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
RPS4X-201ENST00000316084 UBAP1LF5GYI3 381 aa14.45□□□□□ -0.1
RPS4X-201ENST00000316084 CFAP43Q8NDM7 1665 aa14.41□□□□□ -0.1
RPS4X-201ENST00000316084 HSPA1LP34931 641 aa14.41□□□□□ -0.1
RPS4X-201ENST00000316084 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
RPS4X-201ENST00000316084 MAGI3Q5TCQ9 1506 aa14.39□□□□□ -0.11
RPS4X-201ENST00000316084 PTPRTO14522 1441 aa14.39□□□□□ -0.11
RPS4X-201ENST00000316084 PTPRGP23470 1445 aa14.39□□□□□ -0.11
RPS4X-201ENST00000316084 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
RPS4X-201ENST00000316084 TTBK1Q5TCY1 1321 aaPredicted RBP14.36□□□□□ -0.11
RPS4X-201ENST00000316084 CD109Q6YHK3 1445 aa14.33□□□□□ -0.12
RPS4X-201ENST00000316084 ARAP3Q8WWN8 1544 aa14.32□□□□□ -0.12
RPS4X-201ENST00000316084 UHRF1BP1LA0JNW5 1464 aa14.32□□□□□ -0.12
RPS4X-201ENST00000316084 RGS17Q9UGC6 210 aaPredicted RBP14.31□□□□□ -0.12
RPS4X-201ENST00000316084 ZCCHC11Q5TAX3 1644 aaKnown RBP14.28□□□□□ -0.12
RPS4X-201ENST00000316084 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
RPS4X-201ENST00000316084 KDM5BQ9UGL1 1544 aa14.28□□□□□ -0.12
RPS4X-201ENST00000316084 SRCAPQ6ZRS2 3230 aa14.27□□□□□ -0.13
RPS4X-201ENST00000316084 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
RPS4X-201ENST00000316084 SETD1AO15047 1707 aaKnown RBP14.24□□□□□ -0.13
RPS4X-201ENST00000316084 WDR7Q9Y4E6 1490 aa14.24□□□□□ -0.13
RPS4X-201ENST00000316084 UACAQ9BZF9 1416 aa14.23□□□□□ -0.13
RPS4X-201ENST00000316084 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
RPS4X-201ENST00000316084 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
RPS4X-201ENST00000316084 FER1L4A9Z1Z3 1794 aa14.21□□□□□ -0.13
RPS4X-201ENST00000316084 PIP4K2BP78356 416 aa14.2□□□□□ -0.14
RPS4X-201ENST00000316084 IFFO2Q5TF58 517 aa14.2□□□□□ -0.14
RPS4X-201ENST00000316084 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
RPS4X-201ENST00000316084 UHRF1BP1Q6BDS2 1440 aa14.16□□□□□ -0.14
RPS4X-201ENST00000316084 POTEAQ6S8J7 498 aa14.15□□□□□ -0.14
RPS4X-201ENST00000316084 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.14
RPS4X-201ENST00000316084 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
RPS4X-201ENST00000316084 POGZQ7Z3K3 1410 aa14.15□□□□□ -0.14
RPS4X-201ENST00000316084 FRMPD1Q5SYB0 1578 aa14.15□□□□□ -0.14
RPS4X-201ENST00000316084 SIGLEC1Q9BZZ2 1709 aa14.13□□□□□ -0.15
RPS4X-201ENST00000316084 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
RPS4X-201ENST00000316084 SUPT5HO00267 1087 aaKnown RBP14.12□□□□□ -0.15
RPS4X-201ENST00000316084 FANCAO15360 1455 aa14.11□□□□□ -0.15
RPS4X-201ENST00000316084 CEBPAP49715 358 aaPredicted RBP14.1□□□□□ -0.15
RPS4X-201ENST00000316084 UPF1Q92900 1129 aaKnown RBP eCLIP14.1□□□□□ -0.15
RPS4X-201ENST00000316084 WRNQ14191 1432 aaPredicted RBP eCLIP14.1□□□□□ -0.15
RPS4X-201ENST00000316084 CARMIL2Q6F5E8 1435 aa14.1□□□□□ -0.15
RPS4X-201ENST00000316084 SETD1BQ9UPS6 1966 aaKnown RBP14.09□□□□□ -0.15
RPS4X-201ENST00000316084 MLECQ14165 292 aa14.09□□□□□ -0.15
RPS4X-201ENST00000316084 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
RPS4X-201ENST00000316084 NCOA1Q15788 1441 aa14.08□□□□□ -0.16
RPS4X-201ENST00000316084 TOM1O60784 492 aa14.07□□□□□ -0.16
RPS4X-201ENST00000316084 KIAA0556O60303 1618 aa14.03□□□□□ -0.16
RPS4X-201ENST00000316084 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
RPS4X-201ENST00000316084 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
RPS4X-201ENST00000316084 AKNAQ7Z591 1439 aa13.99□□□□□ -0.17
RPS4X-201ENST00000316084 NEO1Q92859 1461 aa13.97□□□□□ -0.17
RPS4X-201ENST00000316084 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
RPS4X-201ENST00000316084 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
RPS4X-201ENST00000316084 CAMSAP1Q5T5Y3 1602 aa13.95□□□□□ -0.18
RPS4X-201ENST00000316084 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
RPS4X-201ENST00000316084 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
RPS4X-201ENST00000316084 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms