RNA–Protein interactions for RNA: ENST00000311916.6

TWNK-201, Transcript of twinkle mtDNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWNK, Length 3,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-201ENST00000311916 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
TWNK-201ENST00000311916 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
TWNK-201ENST00000311916 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
TWNK-201ENST00000311916 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
TWNK-201ENST00000311916 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
TWNK-201ENST00000311916 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
TWNK-201ENST00000311916 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
TWNK-201ENST00000311916 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
TWNK-201ENST00000311916 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
TWNK-201ENST00000311916 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
TWNK-201ENST00000311916 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
TWNK-201ENST00000311916 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
TWNK-201ENST00000311916 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
TWNK-201ENST00000311916 KIF21AQ7Z4S6 1674 aa16.99■□□□□ 0.31
TWNK-201ENST00000311916 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
TWNK-201ENST00000311916 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
TWNK-201ENST00000311916 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
TWNK-201ENST00000311916 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
TWNK-201ENST00000311916 TIAM1Q13009 1591 aa16.92■□□□□ 0.3
TWNK-201ENST00000311916 PHLDB1Q86UU1 1377 aa16.92■□□□□ 0.3
TWNK-201ENST00000311916 FBLN2P98095 1184 aa16.92■□□□□ 0.3
TWNK-201ENST00000311916 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
TWNK-201ENST00000311916 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
TWNK-201ENST00000311916 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
TWNK-201ENST00000311916 SIN3AQ96ST3 1273 aa16.88■□□□□ 0.29
TWNK-201ENST00000311916 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
TWNK-201ENST00000311916 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
TWNK-201ENST00000311916 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.298e-7■■■□□ 16.1
TWNK-201ENST00000311916 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
TWNK-201ENST00000311916 PCF11O94913 1555 aaKnown RBP16.83■□□□□ 0.28
TWNK-201ENST00000311916 MAP3K1Q13233 1512 aa16.82■□□□□ 0.28
TWNK-201ENST00000311916 EIF5BO60841 1220 aaKnown RBP16.79■□□□□ 0.28
TWNK-201ENST00000311916 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
TWNK-201ENST00000311916 FMN1Q68DA7 1419 aa16.78■□□□□ 0.28
TWNK-201ENST00000311916 CASKIN1Q8WXD9 1431 aa16.77■□□□□ 0.28
TWNK-201ENST00000311916 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
TWNK-201ENST00000311916 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.27
TWNK-201ENST00000311916 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
TWNK-201ENST00000311916 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
TWNK-201ENST00000311916 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
TWNK-201ENST00000311916 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
TWNK-201ENST00000311916 CUL7Q14999 1698 aa16.73■□□□□ 0.27
TWNK-201ENST00000311916 MAPKBP1O60336 1514 aa16.71■□□□□ 0.27
TWNK-201ENST00000311916 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
TWNK-201ENST00000311916 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
TWNK-201ENST00000311916 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
TWNK-201ENST00000311916 FGD6Q6ZV73 1430 aa16.68■□□□□ 0.26
TWNK-201ENST00000311916 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
TWNK-201ENST00000311916 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
TWNK-201ENST00000311916 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
TWNK-201ENST00000311916 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
TWNK-201ENST00000311916 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
TWNK-201ENST00000311916 WDR62O43379 1518 aa16.64■□□□□ 0.25
TWNK-201ENST00000311916 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
TWNK-201ENST00000311916 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
TWNK-201ENST00000311916 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
TWNK-201ENST00000311916 IFT140Q96RY7 1462 aa16.62■□□□□ 0.25
TWNK-201ENST00000311916 TIMELESSQ9UNS1 1208 aa16.61■□□□□ 0.25
TWNK-201ENST00000311916 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
TWNK-201ENST00000311916 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
TWNK-201ENST00000311916 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
TWNK-201ENST00000311916 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
TWNK-201ENST00000311916 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
TWNK-201ENST00000311916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.25
TWNK-201ENST00000311916 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.24
TWNK-201ENST00000311916 MYOM3Q5VTT5 1437 aa16.57■□□□□ 0.24
TWNK-201ENST00000311916 ANP32CO43423 234 aa16.56■□□□□ 0.24
TWNK-201ENST00000311916 PTPRKQ15262 1439 aa16.56■□□□□ 0.24
TWNK-201ENST00000311916 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
TWNK-201ENST00000311916 HFM1A2PYH4 1435 aa16.52■□□□□ 0.23
TWNK-201ENST00000311916 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
TWNK-201ENST00000311916 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
TWNK-201ENST00000311916 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
TWNK-201ENST00000311916 SUPT6HQ7KZ85 1726 aaKnown RBP16.5■□□□□ 0.23
TWNK-201ENST00000311916 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
TWNK-201ENST00000311916 NAIPQ13075 1403 aa16.49■□□□□ 0.23
TWNK-201ENST00000311916 EHBP1L1Q8N3D4 1523 aa16.49■□□□□ 0.23
TWNK-201ENST00000311916 BCANQ96GW7 911 aa16.47■□□□□ 0.23
TWNK-201ENST00000311916 FOXD1Q16676 465 aa16.46■□□□□ 0.23
TWNK-201ENST00000311916 PTPN23Q9H3S7 1636 aa16.45■□□□□ 0.22
TWNK-201ENST00000311916 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
TWNK-201ENST00000311916 IQGAP2Q13576 1575 aa16.45■□□□□ 0.22
TWNK-201ENST00000311916 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
TWNK-201ENST00000311916 LRRIQ1Q96JM4 1722 aa16.44■□□□□ 0.22
TWNK-201ENST00000311916 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
TWNK-201ENST00000311916 EPRSP07814 1512 aaKnown RBP16.43■□□□□ 0.22
TWNK-201ENST00000311916 MAGI3Q5TCQ9 1506 aa16.42■□□□□ 0.22
TWNK-201ENST00000311916 MPHOSPH9Q99550 1183 aa16.42■□□□□ 0.22
TWNK-201ENST00000311916 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
TWNK-201ENST00000311916 UGGT2Q9NYU1 1516 aa16.41■□□□□ 0.22
TWNK-201ENST00000311916 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
TWNK-201ENST00000311916 ZNF644Q9H582 1327 aaPredicted RBP16.4■□□□□ 0.22
TWNK-201ENST00000311916 NEFLP07196 543 aa16.39■□□□□ 0.21
TWNK-201ENST00000311916 FKBP8Q14318 412 aa16.39■□□□□ 0.21
TWNK-201ENST00000311916 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
TWNK-201ENST00000311916 ADAMTS12P58397 1594 aa16.37■□□□□ 0.21
TWNK-201ENST00000311916 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
TWNK-201ENST00000311916 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
TWNK-201ENST00000311916 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
TWNK-201ENST00000311916 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms