RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 RAB3GAP2Q9H2M9 1393 aa30.43■■■□□ 2.46
RELA-201ENST00000308639 PHLDB1Q86UU1 1377 aa30.39■■■□□ 2.46
RELA-201ENST00000308639 LRRC9Q6ZRR7 1453 aa30.36■■■□□ 2.45
RELA-201ENST00000308639 FAM50AQ14320 339 aaKnown RBP30.36■■■□□ 2.45
RELA-201ENST00000308639 NESP48681 1621 aa30.36■■■□□ 2.45
RELA-201ENST00000308639 FHOD3Q2V2M9 1422 aa30.33■■■□□ 2.45
RELA-201ENST00000308639 PCF11O94913 1555 aaKnown RBP30.31■■■□□ 2.44
RELA-201ENST00000308639 MAPKBP1O60336 1514 aa30.29■■■□□ 2.44
RELA-201ENST00000308639 MAP3K1Q13233 1512 aa30.27■■■□□ 2.44
RELA-201ENST00000308639 POLA1P09884 1462 aaPredicted RBP30.26■■■□□ 2.43
RELA-201ENST00000308639 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
RELA-201ENST00000308639 FHAD1B1AJZ9 1412 aa30.23■■■□□ 2.43
RELA-201ENST00000308639 SIN3AQ96ST3 1273 aa30.22■■■□□ 2.43
RELA-201ENST00000308639 SETD5Q9C0A6 1442 aa30.22■■■□□ 2.43
RELA-201ENST00000308639 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
RELA-201ENST00000308639 ABCA10Q8WWZ4 1543 aa30.18■■■□□ 2.42
RELA-201ENST00000308639 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
RELA-201ENST00000308639 KCNH8Q96L42 1107 aa30.09■■■□□ 2.41
RELA-201ENST00000308639 TDRD9Q8NDG6 1382 aaKnown RBP30.06■■■□□ 2.4
RELA-201ENST00000308639 DNAJC5BQ9UF47 199 aa30.05■■■□□ 2.4
RELA-201ENST00000308639 WDR97A6NE52 1622 aa30.05■■■□□ 2.4
RELA-201ENST00000308639 FYCO1Q9BQS8 1478 aa30.04■■■□□ 2.4
RELA-201ENST00000308639 CASKIN1Q8WXD9 1431 aa30.03■■■□□ 2.4
RELA-201ENST00000308639 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
RELA-201ENST00000308639 CTTNBP2Q8WZ74 1663 aa30■■■□□ 2.39
RELA-201ENST00000308639 HIRIP3Q9BW71 556 aaPredicted RBP30■■■□□ 2.39
RELA-201ENST00000308639 EFCAB5A4FU69 1503 aa29.99■■■□□ 2.39
RELA-201ENST00000308639 CUL7Q14999 1698 aa29.99■■■□□ 2.39
RELA-201ENST00000308639 DDX10Q13206 875 aaKnown RBP29.94■■■□□ 2.38
RELA-201ENST00000308639 SNAPC4Q5SXM2 1469 aa29.91■■■□□ 2.38
RELA-201ENST00000308639 AQRO60306 1485 aaKnown RBP eCLIP29.9■■■□□ 2.385e-7■■■■■ 31.2
RELA-201ENST00000308639 MTUS2Q5JR59 1369 aa29.89■■■□□ 2.37
RELA-201ENST00000308639 FMN1Q68DA7 1419 aa29.88■■■□□ 2.37
RELA-201ENST00000308639 FGD6Q6ZV73 1430 aa29.88■■■□□ 2.37
RELA-201ENST00000308639 SUPT16HQ9Y5B9 1047 aaKnown RBP29.86■■■□□ 2.37
RELA-201ENST00000308639 PTPRKQ15262 1439 aa29.85■■■□□ 2.37
RELA-201ENST00000308639 LRRIQ1Q96JM4 1722 aa29.84■■■□□ 2.37
RELA-201ENST00000308639 GAPVD1Q14C86 1478 aa29.84■■■□□ 2.37
RELA-201ENST00000308639 LAMC3Q9Y6N6 1575 aa29.82■■■□□ 2.36
RELA-201ENST00000308639 ABCA5Q8WWZ7 1642 aa29.81■■■□□ 2.36
RELA-201ENST00000308639 PPP1R15AO75807 674 aaPredicted RBP29.79■■■□□ 2.36
RELA-201ENST00000308639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.77■■■□□ 2.36
RELA-201ENST00000308639 SAMD9Q5K651 1589 aa29.76■■■□□ 2.35
RELA-201ENST00000308639 CCDC18Q5T9S5 1454 aa29.75■■■□□ 2.35
RELA-201ENST00000308639 NCOA2Q15596 1464 aa29.74■■■□□ 2.35
RELA-201ENST00000308639 GRIN2BQ13224 1484 aa29.71■■■□□ 2.35
RELA-201ENST00000308639 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
RELA-201ENST00000308639 ARID3CA6NKF2 412 aa29.69■■■□□ 2.34
RELA-201ENST00000308639 PDS5BQ9NTI5 1447 aa29.68■■■□□ 2.34
RELA-201ENST00000308639 TIMELESSQ9UNS1 1208 aa29.66■■■□□ 2.34
RELA-201ENST00000308639 TONSLQ96HA7 1378 aa29.66■■■□□ 2.34
RELA-201ENST00000308639 HFM1A2PYH4 1435 aa29.66■■■□□ 2.34
RELA-201ENST00000308639 MYOM3Q5VTT5 1437 aa29.66■■■□□ 2.34
RELA-201ENST00000308639 PTPN23Q9H3S7 1636 aa29.66■■■□□ 2.34
RELA-201ENST00000308639 CHIC2Q9UKJ5 165 aa29.65■■■□□ 2.34
RELA-201ENST00000308639 MAGI3Q5TCQ9 1506 aa29.64■■■□□ 2.34
RELA-201ENST00000308639 NAIPQ13075 1403 aa29.63■■■□□ 2.33
RELA-201ENST00000308639 RRP7BPQ9NSQ0 103 aa29.63■■■□□ 2.33
RELA-201ENST00000308639 UACAQ9BZF9 1416 aa29.61■■■□□ 2.33
RELA-201ENST00000308639 SUPT6HQ7KZ85 1726 aaKnown RBP29.58■■■□□ 2.33
RELA-201ENST00000308639 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
RELA-201ENST00000308639 EHBP1L1Q8N3D4 1523 aa29.55■■■□□ 2.32
RELA-201ENST00000308639 BCANQ96GW7 911 aa29.54■■■□□ 2.32
RELA-201ENST00000308639 UGGT2Q9NYU1 1516 aa29.52■■■□□ 2.32
RELA-201ENST00000308639 TRIM52Q96A61 297 aa29.51■■■□□ 2.31
RELA-201ENST00000308639 THOC2Q8NI27 1593 aaKnown RBP29.49■■■□□ 2.31
RELA-201ENST00000308639 CDK13Q14004 1512 aaKnown RBP29.48■■■□□ 2.31
RELA-201ENST00000308639 ANP32CO43423 234 aa29.48■■■□□ 2.31
RELA-201ENST00000308639 PBRM1Q86U86 1689 aa29.45■■■□□ 2.31
RELA-201ENST00000308639 ARHGEF11O15085 1522 aa29.45■■■□□ 2.3
RELA-201ENST00000308639 KDM6BO15054 1643 aa29.43■■■□□ 2.3
RELA-201ENST00000308639 KDM5BQ9UGL1 1544 aa29.42■■■□□ 2.3
RELA-201ENST00000308639 EPRSP07814 1512 aaKnown RBP29.41■■■□□ 2.3
RELA-201ENST00000308639 IQGAP2Q13576 1575 aa29.41■■■□□ 2.3
RELA-201ENST00000308639 FKBP8Q14318 412 aa29.4■■■□□ 2.3
RELA-201ENST00000308639 FOXD1Q16676 465 aa29.39■■■□□ 2.3
RELA-201ENST00000308639 DENND4BO75064 1496 aaPredicted RBP29.39■■■□□ 2.3
RELA-201ENST00000308639 HECW1Q76N89 1606 aa29.38■■■□□ 2.29
RELA-201ENST00000308639 TSHZ2Q9NRE2 1034 aa29.36■■■□□ 2.29
RELA-201ENST00000308639 ADAMTS12P58397 1594 aa29.36■■■□□ 2.29
RELA-201ENST00000308639 CCER2I3L3R5 266 aa29.35■■■□□ 2.29
RELA-201ENST00000308639 TCOF1Q13428 1488 aaKnown RBP29.33■■■□□ 2.29
RELA-201ENST00000308639 ZNF608Q9ULD9 1512 aaPredicted RBP29.32■■■□□ 2.28
RELA-201ENST00000308639 WDR62O43379 1518 aa29.29■■■□□ 2.28
RELA-201ENST00000308639 HSPA5P11021 654 aaKnown RBP29.28■■■□□ 2.28
RELA-201ENST00000308639 GCC2Q8IWJ2 1684 aa29.28■■■□□ 2.28
RELA-201ENST00000308639 MPHOSPH9Q99550 1183 aa29.27■■■□□ 2.28
RELA-201ENST00000308639 ZNF644Q9H582 1327 aaPredicted RBP29.26■■■□□ 2.27
RELA-201ENST00000308639 MRC2Q9UBG0 1479 aa29.25■■■□□ 2.27
RELA-201ENST00000308639 WASHC2AQ641Q2 1341 aa29.23■■■□□ 2.27
RELA-201ENST00000308639 L3MBTL2Q969R5 705 aa29.2■■■□□ 2.27
RELA-201ENST00000308639 MIA2Q96PC5 1412 aa29.18■■■□□ 2.26
RELA-201ENST00000308639 DISP1Q96F81 1524 aa29.14■■■□□ 2.26
RELA-201ENST00000308639 AKNAQ7Z591 1439 aa29.14■■■□□ 2.25
RELA-201ENST00000308639 C11orf95C9JLR9 678 aaPredicted RBP29.12■■■□□ 2.25
RELA-201ENST00000308639 DAPK1P53355 1430 aa29.12■■■□□ 2.25
RELA-201ENST00000308639 NEFLP07196 543 aa29.12■■■□□ 2.25
RELA-201ENST00000308639 NUP153P49790 1475 aaKnown RBP29.11■■■□□ 2.25
RELA-201ENST00000308639 EIF4G2P78344 907 aaKnown RBP eCLIP29.11■■■□□ 2.25
RELA-201ENST00000308639 HNRNPUQ00839 825 aaKnown RBP eCLIP29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms