RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 MYT1Q01538 1121 aa23.77■■□□□ 1.4
SSH3-201ENST00000308127 TSHZ2Q9NRE2 1034 aa23.77■■□□□ 1.4
SSH3-201ENST00000308127 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
SSH3-201ENST00000308127 SETD5Q9C0A6 1442 aa23.72■■□□□ 1.39
SSH3-201ENST00000308127 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
SSH3-201ENST00000308127 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
SSH3-201ENST00000308127 FKBP8Q14318 412 aa23.71■■□□□ 1.39
SSH3-201ENST00000308127 HMGXB3Q12766 1538 aa23.7■■□□□ 1.39
SSH3-201ENST00000308127 TIAM1Q13009 1591 aa23.68■■□□□ 1.38
SSH3-201ENST00000308127 LRRC9Q6ZRR7 1453 aa23.66■■□□□ 1.38
SSH3-201ENST00000308127 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
SSH3-201ENST00000308127 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.38
SSH3-201ENST00000308127 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
SSH3-201ENST00000308127 PCF11O94913 1555 aaKnown RBP23.55■■□□□ 1.36
SSH3-201ENST00000308127 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
SSH3-201ENST00000308127 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
SSH3-201ENST00000308127 ANP32CO43423 234 aa23.48■■□□□ 1.35
SSH3-201ENST00000308127 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
SSH3-201ENST00000308127 IRX6P78412 446 aaPredicted RBP23.43■■□□□ 1.34
SSH3-201ENST00000308127 TONSLQ96HA7 1378 aa23.43■■□□□ 1.34
SSH3-201ENST00000308127 NEFLP07196 543 aa23.42■■□□□ 1.34
SSH3-201ENST00000308127 ARID3CA6NKF2 412 aa23.41■■□□□ 1.34
SSH3-201ENST00000308127 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
SSH3-201ENST00000308127 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
SSH3-201ENST00000308127 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
SSH3-201ENST00000308127 PTPRKQ15262 1439 aa23.37■■□□□ 1.33
SSH3-201ENST00000308127 MTUS2Q5JR59 1369 aa23.36■■□□□ 1.33
SSH3-201ENST00000308127 RRP7BPQ9NSQ0 103 aa23.35■■□□□ 1.33
SSH3-201ENST00000308127 ANP32EQ9BTT0 268 aa23.35■■□□□ 1.33
SSH3-201ENST00000308127 NESP48681 1621 aa23.34■■□□□ 1.33
SSH3-201ENST00000308127 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
SSH3-201ENST00000308127 FGD6Q6ZV73 1430 aa23.31■■□□□ 1.32
SSH3-201ENST00000308127 CCDC18Q5T9S5 1454 aa23.31■■□□□ 1.32
SSH3-201ENST00000308127 HNRNPUQ00839 825 aaKnown RBP eCLIP23.3■■□□□ 1.32
SSH3-201ENST00000308127 TDRD9Q8NDG6 1382 aaKnown RBP23.3■■□□□ 1.32
SSH3-201ENST00000308127 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
SSH3-201ENST00000308127 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
SSH3-201ENST00000308127 RBM19Q9Y4C8 960 aaKnown RBP23.28■■□□□ 1.32
SSH3-201ENST00000308127 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
SSH3-201ENST00000308127 CCER2I3L3R5 266 aa23.27■■□□□ 1.32
SSH3-201ENST00000308127 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.32
SSH3-201ENST00000308127 FYCO1Q9BQS8 1478 aa23.27■■□□□ 1.31
SSH3-201ENST00000308127 FOXD1Q16676 465 aa23.26■■□□□ 1.31
SSH3-201ENST00000308127 TIMELESSQ9UNS1 1208 aa23.26■■□□□ 1.31
SSH3-201ENST00000308127 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
SSH3-201ENST00000308127 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
SSH3-201ENST00000308127 CC2D2AQ9P2K1 1620 aa23.2■■□□□ 1.3
SSH3-201ENST00000308127 CCDC184Q52MB2 194 aa23.19■■□□□ 1.3
SSH3-201ENST00000308127 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
SSH3-201ENST00000308127 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
SSH3-201ENST00000308127 NAIPQ13075 1403 aa23.17■■□□□ 1.3
SSH3-201ENST00000308127 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
SSH3-201ENST00000308127 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
SSH3-201ENST00000308127 NCOA2Q15596 1464 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 HFM1A2PYH4 1435 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 DNAJC5BQ9UF47 199 aa23.15■■□□□ 1.3
SSH3-201ENST00000308127 PTPN23Q9H3S7 1636 aa23.13■■□□□ 1.29
SSH3-201ENST00000308127 SENP3-EIF4A1A0A087X0R7 540 aa23.13■■□□□ 1.29
SSH3-201ENST00000308127 DNMBPQ6XZF7 1577 aa23.13■■□□□ 1.29
SSH3-201ENST00000308127 EFCAB5A4FU69 1503 aa23.12■■□□□ 1.29
SSH3-201ENST00000308127 FAM9BQ8IZU0 186 aa23.1■■□□□ 1.29
SSH3-201ENST00000308127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.09■■□□□ 1.29
SSH3-201ENST00000308127 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
SSH3-201ENST00000308127 C11orf95C9JLR9 678 aaPredicted RBP23.07■■□□□ 1.28
SSH3-201ENST00000308127 LRRIQ1Q96JM4 1722 aa23.07■■□□□ 1.28
SSH3-201ENST00000308127 CTTNBP2Q8WZ74 1663 aa23.06■■□□□ 1.28
SSH3-201ENST00000308127 MSH5O43196 834 aa23.05■■□□□ 1.28
SSH3-201ENST00000308127 L3MBTL2Q969R5 705 aa23.04■■□□□ 1.28
SSH3-201ENST00000308127 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
SSH3-201ENST00000308127 KDM5BQ9UGL1 1544 aa23.02■■□□□ 1.28
SSH3-201ENST00000308127 MAGI3Q5TCQ9 1506 aa23.01■■□□□ 1.27
SSH3-201ENST00000308127 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
SSH3-201ENST00000308127 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
SSH3-201ENST00000308127 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
SSH3-201ENST00000308127 KDM6BO15054 1643 aa22.99■■□□□ 1.27
SSH3-201ENST00000308127 CUL7Q14999 1698 aa22.99■■□□□ 1.27
SSH3-201ENST00000308127 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
SSH3-201ENST00000308127 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
SSH3-201ENST00000308127 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
SSH3-201ENST00000308127 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
SSH3-201ENST00000308127 NBPF8Q3BBV2 869 aa22.94■■□□□ 1.26
SSH3-201ENST00000308127 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
SSH3-201ENST00000308127 B4GALNT3Q6L9W6 998 aa22.93■■□□□ 1.26
SSH3-201ENST00000308127 ZNF326Q5BKZ1 582 aaKnown RBP22.92■■□□□ 1.26
SSH3-201ENST00000308127 CDK11AQ9UQ88 783 aaPredicted RBP22.92■■□□□ 1.26
SSH3-201ENST00000308127 SUPT6HQ7KZ85 1726 aaKnown RBP22.92■■□□□ 1.26
SSH3-201ENST00000308127 CDK13Q14004 1512 aaKnown RBP22.91■■□□□ 1.26
SSH3-201ENST00000308127 SAMD9Q5K651 1589 aa22.89■■□□□ 1.26
SSH3-201ENST00000308127 PRKRIP1Q9H875 184 aaPredicted RBP22.88■■□□□ 1.25
SSH3-201ENST00000308127 UGGT2Q9NYU1 1516 aa22.88■■□□□ 1.25
SSH3-201ENST00000308127 EHBP1L1Q8N3D4 1523 aa22.88■■□□□ 1.25
SSH3-201ENST00000308127 BCL11AQ9H165 835 aa22.87■■□□□ 1.25
SSH3-201ENST00000308127 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
SSH3-201ENST00000308127 SLC4A1APQ9BWU0 796 aaKnown RBP22.83■■□□□ 1.25
SSH3-201ENST00000308127 CCDC7Q96M83 1385 aa22.83■■□□□ 1.24
SSH3-201ENST00000308127 ABCA5Q8WWZ7 1642 aa22.81■■□□□ 1.24
SSH3-201ENST00000308127 ERICH6Q7L0X2 663 aa22.8■■□□□ 1.24
SSH3-201ENST00000308127 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms