RNA–Protein interactions for RNA: ENST00000308064.6

CHST1-201, Transcript of carbohydrate sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST1-201ENST00000308064 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
CHST1-201ENST00000308064 MAP3K1Q13233 1512 aa29.67■■■□□ 2.34
CHST1-201ENST00000308064 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
CHST1-201ENST00000308064 LRRC9Q6ZRR7 1453 aa29.66■■■□□ 2.34
CHST1-201ENST00000308064 PCF11O94913 1555 aaKnown RBP29.64■■■□□ 2.34
CHST1-201ENST00000308064 PHLDB1Q86UU1 1377 aa29.63■■■□□ 2.33
CHST1-201ENST00000308064 FHOD3Q2V2M9 1422 aa29.61■■■□□ 2.33
CHST1-201ENST00000308064 RAB3GAP2Q9H2M9 1393 aa29.59■■■□□ 2.33
CHST1-201ENST00000308064 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
CHST1-201ENST00000308064 ATP1B4Q9UN42 357 aaPredicted RBP29.57■■■□□ 2.32
CHST1-201ENST00000308064 CFAP43Q8NDM7 1665 aa29.55■■■□□ 2.32
CHST1-201ENST00000308064 URB2Q14146 1524 aaKnown RBP29.51■■■□□ 2.31
CHST1-201ENST00000308064 MAPKBP1O60336 1514 aa29.5■■■□□ 2.31
CHST1-201ENST00000308064 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
CHST1-201ENST00000308064 CUL7Q14999 1698 aa29.47■■■□□ 2.31
CHST1-201ENST00000308064 DNAJC5BQ9UF47 199 aa29.47■■■□□ 2.31
CHST1-201ENST00000308064 CTTNBP2Q8WZ74 1663 aa29.44■■■□□ 2.3
CHST1-201ENST00000308064 SETD5Q9C0A6 1442 aa29.43■■■□□ 2.3
CHST1-201ENST00000308064 WDR97A6NE52 1622 aa29.43■■■□□ 2.3
CHST1-201ENST00000308064 EFCAB5A4FU69 1503 aa29.43■■■□□ 2.3
CHST1-201ENST00000308064 PELP1Q8IZL8 1130 aaKnown RBP29.42■■■□□ 2.3
CHST1-201ENST00000308064 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
CHST1-201ENST00000308064 FYCO1Q9BQS8 1478 aa29.42■■■□□ 2.3
CHST1-201ENST00000308064 LAMC3Q9Y6N6 1575 aa29.41■■■□□ 2.3
CHST1-201ENST00000308064 CASKIN1Q8WXD9 1431 aa29.39■■■□□ 2.3
CHST1-201ENST00000308064 ABCA5Q8WWZ7 1642 aa29.33■■■□□ 2.29
CHST1-201ENST00000308064 AQRO60306 1485 aaKnown RBP eCLIP29.33■■■□□ 2.29
CHST1-201ENST00000308064 SNAPC4Q5SXM2 1469 aa29.3■■■□□ 2.28
CHST1-201ENST00000308064 SIN3AQ96ST3 1273 aa29.29■■■□□ 2.28
CHST1-201ENST00000308064 GAPVD1Q14C86 1478 aa29.28■■■□□ 2.28
CHST1-201ENST00000308064 FMN1Q68DA7 1419 aa29.25■■■□□ 2.27
CHST1-201ENST00000308064 KIF21AQ7Z4S6 1674 aa29.23■■■□□ 2.27
CHST1-201ENST00000308064 PDS5BQ9NTI5 1447 aa29.22■■■□□ 2.27
CHST1-201ENST00000308064 LRRIQ1Q96JM4 1722 aa29.21■■■□□ 2.27
CHST1-201ENST00000308064 SAMD9Q5K651 1589 aa29.21■■■□□ 2.27
CHST1-201ENST00000308064 FGD6Q6ZV73 1430 aa29.18■■■□□ 2.26
CHST1-201ENST00000308064 MTUS2Q5JR59 1369 aa29.16■■■□□ 2.26
CHST1-201ENST00000308064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.14■■■□□ 2.26
CHST1-201ENST00000308064 PTPRKQ15262 1439 aa29.11■■■□□ 2.25
CHST1-201ENST00000308064 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
CHST1-201ENST00000308064 GRIN2BQ13224 1484 aa29.11■■■□□ 2.25
CHST1-201ENST00000308064 NCOA2Q15596 1464 aa29.06■■■□□ 2.24
CHST1-201ENST00000308064 KCNH8Q96L42 1107 aa29.03■■■□□ 2.24
CHST1-201ENST00000308064 CCDC18Q5T9S5 1454 aa29■■■□□ 2.23
CHST1-201ENST00000308064 MAGI3Q5TCQ9 1506 aa28.99■■■□□ 2.23
CHST1-201ENST00000308064 MYOM3Q5VTT5 1437 aa28.99■■■□□ 2.23
CHST1-201ENST00000308064 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
CHST1-201ENST00000308064 HFM1A2PYH4 1435 aa28.97■■■□□ 2.23
CHST1-201ENST00000308064 THOC2Q8NI27 1593 aaKnown RBP28.96■■■□□ 2.23
CHST1-201ENST00000308064 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
CHST1-201ENST00000308064 PTPN23Q9H3S7 1636 aa28.95■■■□□ 2.23
CHST1-201ENST00000308064 SUPT6HQ7KZ85 1726 aaKnown RBP28.95■■■□□ 2.22
CHST1-201ENST00000308064 EHBP1L1Q8N3D4 1523 aa28.94■■■□□ 2.22
CHST1-201ENST00000308064 DDX10Q13206 875 aaKnown RBP28.94■■■□□ 2.22
CHST1-201ENST00000308064 PPP1R15AO75807 674 aaPredicted RBP28.93■■■□□ 2.22
CHST1-201ENST00000308064 NAIPQ13075 1403 aa28.91■■■□□ 2.22
CHST1-201ENST00000308064 TIMELESSQ9UNS1 1208 aa28.91■■■□□ 2.22
CHST1-201ENST00000308064 UGGT2Q9NYU1 1516 aa28.9■■■□□ 2.22
CHST1-201ENST00000308064 UACAQ9BZF9 1416 aa28.88■■■□□ 2.21
CHST1-201ENST00000308064 ARHGEF11O15085 1522 aa28.87■■■□□ 2.21
CHST1-201ENST00000308064 ADAMTS12P58397 1594 aa28.87■■■□□ 2.21
CHST1-201ENST00000308064 IQGAP2Q13576 1575 aa28.86■■■□□ 2.21
CHST1-201ENST00000308064 ARID3CA6NKF2 412 aa28.85■■■□□ 2.21
CHST1-201ENST00000308064 TONSLQ96HA7 1378 aa28.81■■■□□ 2.2
CHST1-201ENST00000308064 CDK13Q14004 1512 aaKnown RBP28.81■■■□□ 2.2
CHST1-201ENST00000308064 MRC2Q9UBG0 1479 aa28.81■■■□□ 2.2
CHST1-201ENST00000308064 HECW1Q76N89 1606 aa28.8■■■□□ 2.2
CHST1-201ENST00000308064 RRP7BPQ9NSQ0 103 aa28.79■■■□□ 2.2
CHST1-201ENST00000308064 CHIC2Q9UKJ5 165 aa28.79■■■□□ 2.2
CHST1-201ENST00000308064 EPRSP07814 1512 aaKnown RBP28.79■■■□□ 2.2
CHST1-201ENST00000308064 ZNF608Q9ULD9 1512 aaPredicted RBP28.78■■■□□ 2.2
CHST1-201ENST00000308064 SUPT16HQ9Y5B9 1047 aaKnown RBP28.77■■■□□ 2.2
CHST1-201ENST00000308064 TCOF1Q13428 1488 aaKnown RBP28.73■■■□□ 2.19
CHST1-201ENST00000308064 WDR62O43379 1518 aa28.72■■■□□ 2.19
CHST1-201ENST00000308064 KDM6BO15054 1643 aa28.7■■■□□ 2.18
CHST1-201ENST00000308064 KDM5BQ9UGL1 1544 aa28.69■■■□□ 2.18
CHST1-201ENST00000308064 DENND4BO75064 1496 aaPredicted RBP28.68■■■□□ 2.18
CHST1-201ENST00000308064 GCC2Q8IWJ2 1684 aa28.65■■■□□ 2.18
CHST1-201ENST00000308064 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
CHST1-201ENST00000308064 TRIM52Q96A61 297 aa28.6■■■□□ 2.17
CHST1-201ENST00000308064 DISP1Q96F81 1524 aa28.6■■■□□ 2.17
CHST1-201ENST00000308064 MIA2Q96PC5 1412 aa28.58■■■□□ 2.17
CHST1-201ENST00000308064 KIAA0556O60303 1618 aa28.57■■■□□ 2.16
CHST1-201ENST00000308064 KIAA0586Q9BVV6 1533 aa28.54■■■□□ 2.16
CHST1-201ENST00000308064 AKNAQ7Z591 1439 aa28.54■■■□□ 2.16
CHST1-201ENST00000308064 ANP32CO43423 234 aa28.53■■■□□ 2.16
CHST1-201ENST00000308064 NUP153P49790 1475 aaKnown RBP28.53■■■□□ 2.16
CHST1-201ENST00000308064 FOXD1Q16676 465 aa28.52■■■□□ 2.16
CHST1-201ENST00000308064 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
CHST1-201ENST00000308064 ZNF644Q9H582 1327 aaPredicted RBP28.51■■■□□ 2.15
CHST1-201ENST00000308064 GRIN2AQ12879 1464 aa28.5■■■□□ 2.15
CHST1-201ENST00000308064 MPHOSPH9Q99550 1183 aa28.49■■■□□ 2.15
CHST1-201ENST00000308064 CCER2I3L3R5 266 aa28.48■■■□□ 2.15
CHST1-201ENST00000308064 DAPK1P53355 1430 aa28.46■■■□□ 2.15
CHST1-201ENST00000308064 RAPGEF6Q8TEU7 1601 aa28.44■■■□□ 2.14
CHST1-201ENST00000308064 ABCC5O15440 1437 aa28.43■■■□□ 2.14
CHST1-201ENST00000308064 HSPA5P11021 654 aaKnown RBP28.41■■■□□ 2.14
CHST1-201ENST00000308064 DNMT1P26358 1616 aaKnown RBP28.39■■■□□ 2.14
CHST1-201ENST00000308064 L3MBTL2Q969R5 705 aa28.38■■■□□ 2.13
CHST1-201ENST00000308064 WASHC2AQ641Q2 1341 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms