RNA–Protein interactions for RNA: ENST00000299853.9

POLR3E-201, Transcript of RNA polymerase III subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR3E, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-201ENST00000299853 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
POLR3E-201ENST00000299853 FHOD3Q2V2M9 1422 aa17.96■□□□□ 0.47
POLR3E-201ENST00000299853 CNGB1Q14028 1251 aaPredicted RBP17.96■□□□□ 0.47
POLR3E-201ENST00000299853 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
POLR3E-201ENST00000299853 RAB3GAP2Q9H2M9 1393 aa17.95■□□□□ 0.46
POLR3E-201ENST00000299853 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
POLR3E-201ENST00000299853 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
POLR3E-201ENST00000299853 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
POLR3E-201ENST00000299853 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
POLR3E-201ENST00000299853 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
POLR3E-201ENST00000299853 POLA1P09884 1462 aaPredicted RBP17.9■□□□□ 0.46
POLR3E-201ENST00000299853 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
POLR3E-201ENST00000299853 LRRC9Q6ZRR7 1453 aa17.89■□□□□ 0.45
POLR3E-201ENST00000299853 TOPBP1Q92547 1522 aa17.89■□□□□ 0.45
POLR3E-201ENST00000299853 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
POLR3E-201ENST00000299853 PCF11O94913 1555 aaKnown RBP17.85■□□□□ 0.45
POLR3E-201ENST00000299853 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
POLR3E-201ENST00000299853 KCNH8Q96L42 1107 aa17.83■□□□□ 0.45
POLR3E-201ENST00000299853 FKBP8Q14318 412 aa17.83■□□□□ 0.44
POLR3E-201ENST00000299853 SUPT16HQ9Y5B9 1047 aaKnown RBP17.83■□□□□ 0.44
POLR3E-201ENST00000299853 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
POLR3E-201ENST00000299853 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
POLR3E-201ENST00000299853 ERICH6Q7L0X2 663 aa17.8■□□□□ 0.44
POLR3E-201ENST00000299853 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
POLR3E-201ENST00000299853 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
POLR3E-201ENST00000299853 NEFLP07196 543 aa17.78■□□□□ 0.44
POLR3E-201ENST00000299853 IRX6P78412 446 aaPredicted RBP17.77■□□□□ 0.44
POLR3E-201ENST00000299853 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
POLR3E-201ENST00000299853 MAPKBP1O60336 1514 aa17.75■□□□□ 0.43
POLR3E-201ENST00000299853 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
POLR3E-201ENST00000299853 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
POLR3E-201ENST00000299853 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
POLR3E-201ENST00000299853 CASKIN1Q8WXD9 1431 aa17.7■□□□□ 0.42
POLR3E-201ENST00000299853 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
POLR3E-201ENST00000299853 GAPVD1Q14C86 1478 aa17.68■□□□□ 0.42
POLR3E-201ENST00000299853 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
POLR3E-201ENST00000299853 TSHZ2Q9NRE2 1034 aa17.68■□□□□ 0.42
POLR3E-201ENST00000299853 CFAP43Q8NDM7 1665 aa17.68■□□□□ 0.42
POLR3E-201ENST00000299853 SENP3-EIF4A1A0A087X0R7 540 aa17.68■□□□□ 0.42
POLR3E-201ENST00000299853 CHIC2Q9UKJ5 165 aa17.68■□□□□ 0.42
POLR3E-201ENST00000299853 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
POLR3E-201ENST00000299853 WDR97A6NE52 1622 aa17.66■□□□□ 0.42
POLR3E-201ENST00000299853 CUL7Q14999 1698 aa17.65■□□□□ 0.42
POLR3E-201ENST00000299853 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
POLR3E-201ENST00000299853 EFCAB5A4FU69 1503 aa17.64■□□□□ 0.42
POLR3E-201ENST00000299853 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
POLR3E-201ENST00000299853 ANP32EQ9BTT0 268 aa17.63■□□□□ 0.41
POLR3E-201ENST00000299853 FGD6Q6ZV73 1430 aa17.63■□□□□ 0.41
POLR3E-201ENST00000299853 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
POLR3E-201ENST00000299853 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
POLR3E-201ENST00000299853 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.415e-7■■■■□ 24.1
POLR3E-201ENST00000299853 SNAPC4Q5SXM2 1469 aa17.59■□□□□ 0.41
POLR3E-201ENST00000299853 PTPRKQ15262 1439 aa17.58■□□□□ 0.41
POLR3E-201ENST00000299853 TONSLQ96HA7 1378 aa17.57■□□□□ 0.4
POLR3E-201ENST00000299853 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
POLR3E-201ENST00000299853 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
POLR3E-201ENST00000299853 NCOA2Q15596 1464 aa17.56■□□□□ 0.4
POLR3E-201ENST00000299853 CCDC18Q5T9S5 1454 aa17.55■□□□□ 0.4
POLR3E-201ENST00000299853 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
POLR3E-201ENST00000299853 POLR3GLQ9BT43 218 aa17.51■□□□□ 0.39
POLR3E-201ENST00000299853 MYOM3Q5VTT5 1437 aa17.5■□□□□ 0.39
POLR3E-201ENST00000299853 LRRIQ1Q96JM4 1722 aa17.5■□□□□ 0.39
POLR3E-201ENST00000299853 GRIN2BQ13224 1484 aa17.48■□□□□ 0.39
POLR3E-201ENST00000299853 FOXD1Q16676 465 aa17.48■□□□□ 0.39
POLR3E-201ENST00000299853 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
POLR3E-201ENST00000299853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.392e-7■■■■□ 21.4
POLR3E-201ENST00000299853 NAIPQ13075 1403 aa17.45■□□□□ 0.38
POLR3E-201ENST00000299853 FBLN2P98095 1184 aa17.45■□□□□ 0.38
POLR3E-201ENST00000299853 HFM1A2PYH4 1435 aa17.45■□□□□ 0.38
POLR3E-201ENST00000299853 ANP32CO43423 234 aa17.45■□□□□ 0.38
POLR3E-201ENST00000299853 MAGI3Q5TCQ9 1506 aa17.44■□□□□ 0.38
POLR3E-201ENST00000299853 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
POLR3E-201ENST00000299853 CDK13Q14004 1512 aaKnown RBP17.44■□□□□ 0.38
POLR3E-201ENST00000299853 UACAQ9BZF9 1416 aa17.43■□□□□ 0.38
POLR3E-201ENST00000299853 NBR1Q14596 966 aa17.43■□□□□ 0.38
POLR3E-201ENST00000299853 SUPT6HQ7KZ85 1726 aaKnown RBP17.43■□□□□ 0.38
POLR3E-201ENST00000299853 TARBP1Q13395 1621 aaKnown RBP17.43■□□□□ 0.38
POLR3E-201ENST00000299853 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
POLR3E-201ENST00000299853 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
POLR3E-201ENST00000299853 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
POLR3E-201ENST00000299853 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
POLR3E-201ENST00000299853 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
POLR3E-201ENST00000299853 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
POLR3E-201ENST00000299853 HNRNPUQ00839 825 aaKnown RBP eCLIP17.37■□□□□ 0.37
POLR3E-201ENST00000299853 EPRSP07814 1512 aaKnown RBP17.37■□□□□ 0.37
POLR3E-201ENST00000299853 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
POLR3E-201ENST00000299853 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
POLR3E-201ENST00000299853 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
POLR3E-201ENST00000299853 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
POLR3E-201ENST00000299853 MPHOSPH9Q99550 1183 aa17.33■□□□□ 0.37
POLR3E-201ENST00000299853 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.36
POLR3E-201ENST00000299853 HECW1Q76N89 1606 aa17.32■□□□□ 0.36
POLR3E-201ENST00000299853 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
POLR3E-201ENST00000299853 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
POLR3E-201ENST00000299853 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
POLR3E-201ENST00000299853 KDM6BO15054 1643 aa17.3■□□□□ 0.36
POLR3E-201ENST00000299853 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
POLR3E-201ENST00000299853 CDK11AQ9UQ88 783 aaPredicted RBP17.27■□□□□ 0.36
POLR3E-201ENST00000299853 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.35
POLR3E-201ENST00000299853 FAM9BQ8IZU0 186 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms