RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
CDH8-201ENST00000299345 MIER1Q8N108 512 aa19.81■□□□□ 0.76
CDH8-201ENST00000299345 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
CDH8-201ENST00000299345 GTF3C3Q9Y5Q9 886 aa19.77■□□□□ 0.76
CDH8-201ENST00000299345 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
CDH8-201ENST00000299345 FHOD3Q2V2M9 1422 aa19.77■□□□□ 0.76
CDH8-201ENST00000299345 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
CDH8-201ENST00000299345 TIAM1Q13009 1591 aa19.73■□□□□ 0.75
CDH8-201ENST00000299345 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
CDH8-201ENST00000299345 RAB3GAP2Q9H2M9 1393 aa19.71■□□□□ 0.75
CDH8-201ENST00000299345 MAP3K1Q13233 1512 aa19.69■□□□□ 0.74
CDH8-201ENST00000299345 PHLDB1Q86UU1 1377 aa19.69■□□□□ 0.74
CDH8-201ENST00000299345 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
CDH8-201ENST00000299345 LAMC3Q9Y6N6 1575 aa19.67■□□□□ 0.74
CDH8-201ENST00000299345 MTUS2Q5JR59 1369 aa19.67■□□□□ 0.74
CDH8-201ENST00000299345 SETD5Q9C0A6 1442 aa19.66■□□□□ 0.74
CDH8-201ENST00000299345 FMN1Q68DA7 1419 aa19.66■□□□□ 0.74
CDH8-201ENST00000299345 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.74
CDH8-201ENST00000299345 GAPVD1Q14C86 1478 aa19.63■□□□□ 0.73
CDH8-201ENST00000299345 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
CDH8-201ENST00000299345 CASKIN1Q8WXD9 1431 aa19.61■□□□□ 0.73
CDH8-201ENST00000299345 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
CDH8-201ENST00000299345 CUL7Q14999 1698 aa19.6■□□□□ 0.73
CDH8-201ENST00000299345 FYCO1Q9BQS8 1478 aa19.59■□□□□ 0.73
CDH8-201ENST00000299345 PELP1Q8IZL8 1130 aaKnown RBP19.59■□□□□ 0.73
CDH8-201ENST00000299345 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
CDH8-201ENST00000299345 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDH8-201ENST00000299345 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
CDH8-201ENST00000299345 FGD6Q6ZV73 1430 aa19.46■□□□□ 0.71
CDH8-201ENST00000299345 CFAP43Q8NDM7 1665 aa19.45■□□□□ 0.7
CDH8-201ENST00000299345 CTTNBP2Q8WZ74 1663 aa19.44■□□□□ 0.7
CDH8-201ENST00000299345 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
CDH8-201ENST00000299345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.42■□□□□ 0.7
CDH8-201ENST00000299345 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
CDH8-201ENST00000299345 TONSLQ96HA7 1378 aa19.4■□□□□ 0.7
CDH8-201ENST00000299345 CHIC2Q9UKJ5 165 aa19.4■□□□□ 0.7
CDH8-201ENST00000299345 TRIM52Q96A61 297 aa19.39■□□□□ 0.69
CDH8-201ENST00000299345 MAPKBP1O60336 1514 aa19.39■□□□□ 0.69
CDH8-201ENST00000299345 DDX10Q13206 875 aaKnown RBP19.38■□□□□ 0.69
CDH8-201ENST00000299345 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
CDH8-201ENST00000299345 NCOA2Q15596 1464 aa19.37■□□□□ 0.69
CDH8-201ENST00000299345 RRP7BPQ9NSQ0 103 aa19.37■□□□□ 0.69
CDH8-201ENST00000299345 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
CDH8-201ENST00000299345 MYOM3Q5VTT5 1437 aa19.36■□□□□ 0.69
CDH8-201ENST00000299345 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
CDH8-201ENST00000299345 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
CDH8-201ENST00000299345 FBLN2P98095 1184 aa19.34■□□□□ 0.69
CDH8-201ENST00000299345 HIRIP3Q9BW71 556 aaPredicted RBP19.34■□□□□ 0.69
CDH8-201ENST00000299345 PPP1R15AO75807 674 aaPredicted RBP19.33■□□□□ 0.68
CDH8-201ENST00000299345 CCDC18Q5T9S5 1454 aa19.32■□□□□ 0.68
CDH8-201ENST00000299345 GRIN2BQ13224 1484 aa19.32■□□□□ 0.68
CDH8-201ENST00000299345 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
CDH8-201ENST00000299345 SAMD9Q5K651 1589 aa19.3■□□□□ 0.68
CDH8-201ENST00000299345 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
CDH8-201ENST00000299345 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
CDH8-201ENST00000299345 TARBP1Q13395 1621 aaKnown RBP19.27■□□□□ 0.68
CDH8-201ENST00000299345 HFM1A2PYH4 1435 aa19.27■□□□□ 0.68
CDH8-201ENST00000299345 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
CDH8-201ENST00000299345 IQGAP2Q13576 1575 aa19.25■□□□□ 0.67
CDH8-201ENST00000299345 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
CDH8-201ENST00000299345 SUPT6HQ7KZ85 1726 aaKnown RBP19.24■□□□□ 0.67
CDH8-201ENST00000299345 PTPRKQ15262 1439 aa19.24■□□□□ 0.67
CDH8-201ENST00000299345 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
CDH8-201ENST00000299345 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
CDH8-201ENST00000299345 ANP32CO43423 234 aa19.23■□□□□ 0.67
CDH8-201ENST00000299345 NAIPQ13075 1403 aa19.21■□□□□ 0.67
CDH8-201ENST00000299345 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
CDH8-201ENST00000299345 HECW1Q76N89 1606 aa19.2■□□□□ 0.66
CDH8-201ENST00000299345 EPRSP07814 1512 aaKnown RBP19.2■□□□□ 0.66
CDH8-201ENST00000299345 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
CDH8-201ENST00000299345 CDK13Q14004 1512 aaKnown RBP19.16■□□□□ 0.66
CDH8-201ENST00000299345 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
CDH8-201ENST00000299345 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
CDH8-201ENST00000299345 UGGT2Q9NYU1 1516 aa19.16■□□□□ 0.66
CDH8-201ENST00000299345 KCNH8Q96L42 1107 aa19.15■□□□□ 0.66
CDH8-201ENST00000299345 ZNF777Q9ULD5 760 aaPredicted RBP19.15■□□□□ 0.66
CDH8-201ENST00000299345 KIAA0586Q9BVV6 1533 aa19.14■□□□□ 0.65
CDH8-201ENST00000299345 MIA2Q96PC5 1412 aa19.12■□□□□ 0.65
CDH8-201ENST00000299345 MPHOSPH9Q99550 1183 aa19.12■□□□□ 0.65
CDH8-201ENST00000299345 MAGI3Q5TCQ9 1506 aa19.11■□□□□ 0.65
CDH8-201ENST00000299345 CFDP1Q9UEE9 299 aaPredicted RBP19.1■□□□□ 0.65
CDH8-201ENST00000299345 FOXD1Q16676 465 aa19.07■□□□□ 0.64
CDH8-201ENST00000299345 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
CDH8-201ENST00000299345 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
CDH8-201ENST00000299345 ZNF644Q9H582 1327 aaPredicted RBP19.06■□□□□ 0.64
CDH8-201ENST00000299345 JPH4Q96JJ6 628 aa19.05■□□□□ 0.64
CDH8-201ENST00000299345 LRRIQ1Q96JM4 1722 aa19.05■□□□□ 0.64
CDH8-201ENST00000299345 WDR62O43379 1518 aa19.05■□□□□ 0.64
CDH8-201ENST00000299345 TCOF1Q13428 1488 aaKnown RBP19.05■□□□□ 0.64
CDH8-201ENST00000299345 CARMIL2Q6F5E8 1435 aa19.04■□□□□ 0.64
CDH8-201ENST00000299345 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
CDH8-201ENST00000299345 ARHGEF11O15085 1522 aa19.03■□□□□ 0.64
CDH8-201ENST00000299345 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
CDH8-201ENST00000299345 SUPT16HQ9Y5B9 1047 aaKnown RBP19.03■□□□□ 0.64
CDH8-201ENST00000299345 NEFLP07196 543 aa19.03■□□□□ 0.64
CDH8-201ENST00000299345 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.64
CDH8-201ENST00000299345 L3MBTL2Q969R5 705 aa19■□□□□ 0.63
CDH8-201ENST00000299345 HSPA5P11021 654 aaKnown RBP19■□□□□ 0.63
CDH8-201ENST00000299345 DISP1Q96F81 1524 aa19■□□□□ 0.63
CDH8-201ENST00000299345 AKNAQ7Z591 1439 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms