RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.04■■□□□ 1.12
SNAPC4-201ENST00000298532 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
SNAPC4-201ENST00000298532 STAG3Q9UJ98 1225 aa22.04■■□□□ 1.12
SNAPC4-201ENST00000298532 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.11
SNAPC4-201ENST00000298532 MTUS2Q5JR59 1369 aa22.01■■□□□ 1.11
SNAPC4-201ENST00000298532 DDRGK1Q96HY6 314 aa21.96■■□□□ 1.11
SNAPC4-201ENST00000298532 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
SNAPC4-201ENST00000298532 ARXQ96QS3 562 aa21.91■■□□□ 1.1
SNAPC4-201ENST00000298532 CLIP1P30622 1438 aa21.91■■□□□ 1.1
SNAPC4-201ENST00000298532 HIRIP3Q9BW71 556 aaPredicted RBP21.9■■□□□ 1.1
SNAPC4-201ENST00000298532 SUPT16HQ9Y5B9 1047 aaKnown RBP21.9■■□□□ 1.1
SNAPC4-201ENST00000298532 SLC24A1O60721 1099 aa21.88■■□□□ 1.09
SNAPC4-201ENST00000298532 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
SNAPC4-201ENST00000298532 CADPSQ9ULU8 1353 aa21.88■■□□□ 1.09
SNAPC4-201ENST00000298532 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
SNAPC4-201ENST00000298532 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
SNAPC4-201ENST00000298532 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
SNAPC4-201ENST00000298532 WDR43Q15061 677 aaKnown RBP eCLIP21.84■■□□□ 1.09
SNAPC4-201ENST00000298532 PPM1GO15355 546 aaPredicted RBP21.83■■□□□ 1.09
SNAPC4-201ENST00000298532 CEP162Q5TB80 1403 aa21.82■■□□□ 1.08
SNAPC4-201ENST00000298532 CHGAP10645 457 aaKnown RBP21.82■■□□□ 1.08
SNAPC4-201ENST00000298532 BECN1Q14457 450 aa21.82■■□□□ 1.08
SNAPC4-201ENST00000298532 CHIC2Q9UKJ5 165 aa21.81■■□□□ 1.08
SNAPC4-201ENST00000298532 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
SNAPC4-201ENST00000298532 CUX2O14529 1486 aa21.8■■□□□ 1.08
SNAPC4-201ENST00000298532 PPP4R2Q9NY27 417 aa21.79■■□□□ 1.08
SNAPC4-201ENST00000298532 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
SNAPC4-201ENST00000298532 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
SNAPC4-201ENST00000298532 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
SNAPC4-201ENST00000298532 ERICH6BQ5W0A0 696 aa21.75■■□□□ 1.07
SNAPC4-201ENST00000298532 NOP58Q9Y2X3 529 aaKnown RBP21.75■■□□□ 1.07
SNAPC4-201ENST00000298532 SOGA1O94964 1423 aa21.75■■□□□ 1.07
SNAPC4-201ENST00000298532 TRIM44Q96DX7 344 aaPredicted RBP21.74■■□□□ 1.07
SNAPC4-201ENST00000298532 CARMIL2Q6F5E8 1435 aa21.73■■□□□ 1.07
SNAPC4-201ENST00000298532 PLPPR3Q6T4P5 718 aa21.73■■□□□ 1.07
SNAPC4-201ENST00000298532 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
SNAPC4-201ENST00000298532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.7■■□□□ 1.071e-7■■■■□ 24.6
SNAPC4-201ENST00000298532 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
SNAPC4-201ENST00000298532 CFDP1Q9UEE9 299 aaPredicted RBP21.66■■□□□ 1.06
SNAPC4-201ENST00000298532 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
SNAPC4-201ENST00000298532 ARID4BQ4LE39 1312 aaPredicted RBP21.65■■□□□ 1.06
SNAPC4-201ENST00000298532 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
SNAPC4-201ENST00000298532 TRHP20396 242 aaPredicted RBP21.65■■□□□ 1.06
SNAPC4-201ENST00000298532 KDM2AQ9Y2K7 1162 aa21.64■■□□□ 1.05
SNAPC4-201ENST00000298532 RTN4Q9NQC3 1192 aaKnown RBP21.62■■□□□ 1.05
SNAPC4-201ENST00000298532 GOLGA6L22H0YM25 854 aa21.62■■□□□ 1.05
SNAPC4-201ENST00000298532 RBM19Q9Y4C8 960 aaKnown RBP21.62■■□□□ 1.05
SNAPC4-201ENST00000298532 LAS1LQ9Y4W2 734 aaKnown RBP21.61■■□□□ 1.05
SNAPC4-201ENST00000298532 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
SNAPC4-201ENST00000298532 DEKP35659 375 aaKnown RBP21.58■■□□□ 1.05
SNAPC4-201ENST00000298532 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
SNAPC4-201ENST00000298532 RRP7BPQ9NSQ0 103 aa21.55■■□□□ 1.04
SNAPC4-201ENST00000298532 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
SNAPC4-201ENST00000298532 TNNT2P45379 298 aaPredicted RBP21.53■■□□□ 1.04
SNAPC4-201ENST00000298532 PPP1R15AO75807 674 aaPredicted RBP21.53■■□□□ 1.04
SNAPC4-201ENST00000298532 B4GALNT3Q6L9W6 998 aa21.53■■□□□ 1.04
SNAPC4-201ENST00000298532 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
SNAPC4-201ENST00000298532 NAP1L5Q96NT1 182 aaPredicted RBP21.52■■□□□ 1.03
SNAPC4-201ENST00000298532 FANCD2Q9BXW9 1451 aa21.51■■□□□ 1.03
SNAPC4-201ENST00000298532 CCER2I3L3R5 266 aa21.51■■□□□ 1.03
SNAPC4-201ENST00000298532 NCLP19338 710 aaKnown RBP21.5■■□□□ 1.03
SNAPC4-201ENST00000298532 WIZO95785 1651 aa21.48■■□□□ 1.03
SNAPC4-201ENST00000298532 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
SNAPC4-201ENST00000298532 SIN3AQ96ST3 1273 aa21.46■■□□□ 1.03
SNAPC4-201ENST00000298532 TSHZ2Q9NRE2 1034 aa21.44■■□□□ 1.02
SNAPC4-201ENST00000298532 SENP3-EIF4A1A0A087X0R7 540 aa21.44■■□□□ 1.02
SNAPC4-201ENST00000298532 TIMELESSQ9UNS1 1208 aa21.43■■□□□ 1.02
SNAPC4-201ENST00000298532 PTMAP06454 111 aaKnown RBP21.41■■□□□ 1.02
SNAPC4-201ENST00000298532 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
SNAPC4-201ENST00000298532 RGS3P49796 1198 aa21.39■■□□□ 1.01
SNAPC4-201ENST00000298532 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
SNAPC4-201ENST00000298532 HDGFP51858 240 aaKnown RBP21.36■■□□□ 1.01
SNAPC4-201ENST00000298532 KANK1Q14678 1352 aa21.36■■□□□ 1.01
SNAPC4-201ENST00000298532 DNTTIP2Q5QJE6 756 aaKnown RBP21.36■■□□□ 1.01
SNAPC4-201ENST00000298532 KNSTRNQ9Y448 316 aa21.35■■□□□ 1.01
SNAPC4-201ENST00000298532 CARD11Q9BXL7 1154 aa21.34■■□□□ 1.01
SNAPC4-201ENST00000298532 CDCA8Q53HL2 280 aa21.34■■□□□ 1.01
SNAPC4-201ENST00000298532 L1TD1Q5T7N2 865 aaKnown RBP21.33■■□□□ 1
SNAPC4-201ENST00000298532 C14orf37Q86TY3 774 aa21.33■■□□□ 1
SNAPC4-201ENST00000298532 EFCAB2Q5VUJ9 269 aa21.32■■□□□ 1
SNAPC4-201ENST00000298532 RAPGEF2Q9Y4G8 1499 aa21.31■■□□□ 1
SNAPC4-201ENST00000298532 FTSJ3Q8IY81 847 aaKnown RBP21.3■■□□□ 1
SNAPC4-201ENST00000298532 CFAP53Q96M91 514 aa21.3■■□□□ 1
SNAPC4-201ENST00000298532 JPH4Q96JJ6 628 aa21.29■■□□□ 1
SNAPC4-201ENST00000298532 CASC1Q6TDU7 716 aa21.26■□□□□ 0.99
SNAPC4-201ENST00000298532 RGL3Q3MIN7 710 aa21.25■□□□□ 0.99
SNAPC4-201ENST00000298532 HSP90AB1P08238 724 aaKnown RBP21.21■□□□□ 0.99
SNAPC4-201ENST00000298532 FRAT1Q92837 279 aaPredicted RBP21.19■□□□□ 0.98
SNAPC4-201ENST00000298532 RSPH4AQ5TD94 716 aa21.18■□□□□ 0.98
SNAPC4-201ENST00000298532 MS4A1P11836 297 aa21.18■□□□□ 0.98
SNAPC4-201ENST00000298532 TCERG1O14776 1098 aaKnown RBP21.17■□□□□ 0.98
SNAPC4-201ENST00000298532 NEUROD2Q15784 382 aa21.16■□□□□ 0.98
SNAPC4-201ENST00000298532 HSCBQ8IWL3 235 aa21.16■□□□□ 0.98
SNAPC4-201ENST00000298532 SETD5Q9C0A6 1442 aa21.15■□□□□ 0.98
SNAPC4-201ENST00000298532 ZRSR1Q15695 479 aaKnown RBP21.15■□□□□ 0.98
SNAPC4-201ENST00000298532 CHMP4BQ9H444 224 aaKnown RBP21.15■□□□□ 0.98
SNAPC4-201ENST00000298532 IPO9Q96P70 1041 aaKnown RBP21.14■□□□□ 0.98
SNAPC4-201ENST00000298532 CC2D2AQ9P2K1 1620 aa21.14■□□□□ 0.97
SNAPC4-201ENST00000298532 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
SNAPC4-201ENST00000298532 MSNP26038 577 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms