RNA–Protein interactions for RNA: ENST00000297273.8

CASD1-201, Transcript of CAS1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASD1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-201ENST00000297273 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
CASD1-201ENST00000297273 RAB3GAP2Q9H2M9 1393 aa25.63■■□□□ 1.69
CASD1-201ENST00000297273 MRS2Q9HD23 443 aa25.6■■□□□ 1.69
CASD1-201ENST00000297273 CUX2O14529 1486 aa25.58■■□□□ 1.69
CASD1-201ENST00000297273 KDM2AQ9Y2K7 1162 aa25.58■■□□□ 1.69
CASD1-201ENST00000297273 NPM2Q86SE8 214 aaKnown RBP25.54■■□□□ 1.68
CASD1-201ENST00000297273 CARMIL1Q5VZK9 1371 aa25.53■■□□□ 1.68
CASD1-201ENST00000297273 TSHZ2Q9NRE2 1034 aa25.53■■□□□ 1.68
CASD1-201ENST00000297273 SLC4A1APQ9BWU0 796 aaKnown RBP25.5■■□□□ 1.67
CASD1-201ENST00000297273 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
CASD1-201ENST00000297273 NBR1Q14596 966 aa25.46■■□□□ 1.67
CASD1-201ENST00000297273 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
CASD1-201ENST00000297273 EIF4G2P78344 907 aaKnown RBP eCLIP25.42■■□□□ 1.66
CASD1-201ENST00000297273 B4GALNT3Q6L9W6 998 aa25.39■■□□□ 1.66
CASD1-201ENST00000297273 SETD5Q9C0A6 1442 aa25.39■■□□□ 1.65
CASD1-201ENST00000297273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.36■■□□□ 1.65
CASD1-201ENST00000297273 ANP32EQ9BTT0 268 aa25.36■■□□□ 1.65
CASD1-201ENST00000297273 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
CASD1-201ENST00000297273 PPP1R15AO75807 674 aaPredicted RBP25.34■■□□□ 1.65
CASD1-201ENST00000297273 RBM19Q9Y4C8 960 aaKnown RBP25.33■■□□□ 1.65
CASD1-201ENST00000297273 FHOD3Q2V2M9 1422 aa25.33■■□□□ 1.64
CASD1-201ENST00000297273 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
CASD1-201ENST00000297273 KIF21BO75037 1637 aa25.3■■□□□ 1.64
CASD1-201ENST00000297273 TMC1Q8TDI8 760 aa25.29■■□□□ 1.64
CASD1-201ENST00000297273 HSPA5P11021 654 aaKnown RBP25.29■■□□□ 1.64
CASD1-201ENST00000297273 RGL3Q3MIN7 710 aa25.29■■□□□ 1.64
CASD1-201ENST00000297273 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
CASD1-201ENST00000297273 RTL5Q5HYW3 569 aaPredicted RBP25.28■■□□□ 1.64
CASD1-201ENST00000297273 CCDC136Q96JN2 1154 aa25.27■■□□□ 1.64
CASD1-201ENST00000297273 DAXXQ9UER7 740 aaPredicted RBP25.27■■□□□ 1.64
CASD1-201ENST00000297273 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
CASD1-201ENST00000297273 BCL11AQ9H165 835 aa25.22■■□□□ 1.63
CASD1-201ENST00000297273 PHLDB1Q86UU1 1377 aa25.17■■□□□ 1.62
CASD1-201ENST00000297273 IGF1RP08069 1367 aa25.13■■□□□ 1.61
CASD1-201ENST00000297273 L3MBTL2Q969R5 705 aa25.12■■□□□ 1.61
CASD1-201ENST00000297273 ANP32AP39687 249 aaKnown RBP25.08■■□□□ 1.61
CASD1-201ENST00000297273 FHAD1B1AJZ9 1412 aa25.08■■□□□ 1.61
CASD1-201ENST00000297273 CFDP1Q9UEE9 299 aaPredicted RBP25.07■■□□□ 1.6
CASD1-201ENST00000297273 EIF4G1Q04637 1599 aaKnown RBP25.07■■□□□ 1.6
CASD1-201ENST00000297273 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
CASD1-201ENST00000297273 ARHGAP35Q9NRY4 1499 aa25.07■■□□□ 1.6
CASD1-201ENST00000297273 MPHOSPH9Q99550 1183 aa25.04■■□□□ 1.6
CASD1-201ENST00000297273 CCER2I3L3R5 266 aa25.02■■□□□ 1.6
CASD1-201ENST00000297273 TSPY4P0CV99 314 aa25■■□□□ 1.59
CASD1-201ENST00000297273 TSPY10P0CW01 314 aa25■■□□□ 1.59
CASD1-201ENST00000297273 CARD11Q9BXL7 1154 aa25■■□□□ 1.59
CASD1-201ENST00000297273 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
CASD1-201ENST00000297273 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
CASD1-201ENST00000297273 CCDC184Q52MB2 194 aa24.94■■□□□ 1.58
CASD1-201ENST00000297273 CHGAP10645 457 aaKnown RBP24.94■■□□□ 1.58
CASD1-201ENST00000297273 PPP4R2Q9NY27 417 aa24.94■■□□□ 1.58
CASD1-201ENST00000297273 DCAF11Q8TEB1 546 aa24.92■■□□□ 1.58
CASD1-201ENST00000297273 CC2D1BQ5T0F9 858 aaKnown RBP24.91■■□□□ 1.58
CASD1-201ENST00000297273 ZBTB47Q9UFB7 747 aaPredicted RBP24.91■■□□□ 1.58
CASD1-201ENST00000297273 ZNF644Q9H582 1327 aaPredicted RBP24.91■■□□□ 1.58
CASD1-201ENST00000297273 TIMELESSQ9UNS1 1208 aa24.9■■□□□ 1.58
CASD1-201ENST00000297273 PKD2Q13563 968 aa24.89■■□□□ 1.57
CASD1-201ENST00000297273 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
CASD1-201ENST00000297273 LAS1LQ9Y4W2 734 aaKnown RBP24.85■■□□□ 1.57
CASD1-201ENST00000297273 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
CASD1-201ENST00000297273 CANXP27824 592 aaKnown RBP24.84■■□□□ 1.57
CASD1-201ENST00000297273 PLEKHD1A6NEE1 506 aa24.83■■□□□ 1.57
CASD1-201ENST00000297273 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
CASD1-201ENST00000297273 ARXQ96QS3 562 aa24.8■■□□□ 1.56
CASD1-201ENST00000297273 RRBP1Q9P2E9 1410 aaKnown RBP24.8■■□□□ 1.56
CASD1-201ENST00000297273 WDR97A6NE52 1622 aa24.8■■□□□ 1.56
CASD1-201ENST00000297273 CUX1P39880 1505 aa24.79■■□□□ 1.56
CASD1-201ENST00000297273 RTN4Q9NQC3 1192 aaKnown RBP24.79■■□□□ 1.56
CASD1-201ENST00000297273 LRRC9Q6ZRR7 1453 aa24.78■■□□□ 1.56
CASD1-201ENST00000297273 WASHC2AQ641Q2 1341 aa24.78■■□□□ 1.56
CASD1-201ENST00000297273 PRKRIP1Q9H875 184 aaPredicted RBP24.77■■□□□ 1.56
CASD1-201ENST00000297273 CCDC18Q5T9S5 1454 aa24.74■■□□□ 1.55
CASD1-201ENST00000297273 NEUROD2Q15784 382 aa24.72■■□□□ 1.55
CASD1-201ENST00000297273 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
CASD1-201ENST00000297273 FMN1Q68DA7 1419 aa24.72■■□□□ 1.55
CASD1-201ENST00000297273 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
CASD1-201ENST00000297273 TNNT2P45379 298 aaPredicted RBP24.7■■□□□ 1.54
CASD1-201ENST00000297273 WDR43Q15061 677 aaKnown RBP eCLIP24.66■■□□□ 1.54
CASD1-201ENST00000297273 NESP48681 1621 aa24.66■■□□□ 1.54
CASD1-201ENST00000297273 HNRNPMP52272 730 aaKnown RBP eCLIP24.66■■□□□ 1.54
CASD1-201ENST00000297273 C11orf95C9JLR9 678 aaPredicted RBP24.66■■□□□ 1.54
CASD1-201ENST00000297273 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
CASD1-201ENST00000297273 NOP58Q9Y2X3 529 aaKnown RBP24.65■■□□□ 1.54
CASD1-201ENST00000297273 RGS3P49796 1198 aa24.65■■□□□ 1.54
CASD1-201ENST00000297273 FGD6Q6ZV73 1430 aa24.65■■□□□ 1.54
CASD1-201ENST00000297273 ST20-MTHFSA0A0A6YYL1 179 aa24.64■■□□□ 1.53
CASD1-201ENST00000297273 NBPF8Q3BBV2 869 aa24.63■■□□□ 1.53
CASD1-201ENST00000297273 PLIN1O60240 522 aa24.62■■□□□ 1.53
CASD1-201ENST00000297273 DEKP35659 375 aaKnown RBP24.61■■□□□ 1.53
CASD1-201ENST00000297273 NUP155O75694 1391 aa24.6■■□□□ 1.53
CASD1-201ENST00000297273 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
CASD1-201ENST00000297273 CFTRP13569 1480 aa24.56■■□□□ 1.52
CASD1-201ENST00000297273 KIF7Q2M1P5 1343 aa24.56■■□□□ 1.52
CASD1-201ENST00000297273 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
CASD1-201ENST00000297273 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
CASD1-201ENST00000297273 EIF5BO60841 1220 aaKnown RBP24.53■■□□□ 1.52
CASD1-201ENST00000297273 UNC13AQ9UPW8 1703 aa24.53■■□□□ 1.52
CASD1-201ENST00000297273 NEFMP07197 916 aa24.5■■□□□ 1.51
CASD1-201ENST00000297273 KNSTRNQ9Y448 316 aa24.49■■□□□ 1.51
CASD1-201ENST00000297273 MSH5O43196 834 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms