RNA–Protein interactions for RNA: ENST00000296446.12

PRKAR2A-202, Transcript of protein kinase cAMP-dependent type II regulatory subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PRKAR2A, Length 3,318 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR2A-202ENST00000296446 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
PRKAR2A-202ENST00000296446 ARHGAP35Q9NRY4 1499 aa20.27■□□□□ 0.84
PRKAR2A-202ENST00000296446 CCNB3Q8WWL7 1395 aa20.26■□□□□ 0.83
PRKAR2A-202ENST00000296446 CNGB1Q14028 1251 aaPredicted RBP20.22■□□□□ 0.83
PRKAR2A-202ENST00000296446 DHX57Q6P158 1386 aaKnown RBP20.18■□□□□ 0.82
PRKAR2A-202ENST00000296446 TRIM52Q96A61 297 aa20.16■□□□□ 0.82
PRKAR2A-202ENST00000296446 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
PRKAR2A-202ENST00000296446 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
PRKAR2A-202ENST00000296446 MTUS2Q5JR59 1369 aa20.14■□□□□ 0.81
PRKAR2A-202ENST00000296446 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.81
PRKAR2A-202ENST00000296446 PHLDB1Q86UU1 1377 aa20.13■□□□□ 0.81
PRKAR2A-202ENST00000296446 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
PRKAR2A-202ENST00000296446 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
PRKAR2A-202ENST00000296446 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
PRKAR2A-202ENST00000296446 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
PRKAR2A-202ENST00000296446 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
PRKAR2A-202ENST00000296446 KCNH8Q96L42 1107 aa20.05■□□□□ 0.8
PRKAR2A-202ENST00000296446 AQRO60306 1485 aaKnown RBP eCLIP20.04■□□□□ 0.87e-9■■□□□ 14.2
PRKAR2A-202ENST00000296446 FOXD1Q16676 465 aa20.01■□□□□ 0.79
PRKAR2A-202ENST00000296446 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
PRKAR2A-202ENST00000296446 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
PRKAR2A-202ENST00000296446 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
PRKAR2A-202ENST00000296446 URB2Q14146 1524 aaKnown RBP19.95■□□□□ 0.78
PRKAR2A-202ENST00000296446 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
PRKAR2A-202ENST00000296446 GAPVD1Q14C86 1478 aa19.93■□□□□ 0.78
PRKAR2A-202ENST00000296446 LRRC9Q6ZRR7 1453 aa19.93■□□□□ 0.78
PRKAR2A-202ENST00000296446 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
PRKAR2A-202ENST00000296446 ZNF326Q5BKZ1 582 aaKnown RBP19.92■□□□□ 0.78
PRKAR2A-202ENST00000296446 BCANQ96GW7 911 aa19.92■□□□□ 0.78
PRKAR2A-202ENST00000296446 RRBP1Q9P2E9 1410 aaKnown RBP19.91■□□□□ 0.78
PRKAR2A-202ENST00000296446 DNMBPQ6XZF7 1577 aa19.85■□□□□ 0.77
PRKAR2A-202ENST00000296446 TONSLQ96HA7 1378 aa19.84■□□□□ 0.77
PRKAR2A-202ENST00000296446 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.77
PRKAR2A-202ENST00000296446 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
PRKAR2A-202ENST00000296446 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.77
PRKAR2A-202ENST00000296446 PCF11O94913 1555 aaKnown RBP19.83■□□□□ 0.76
PRKAR2A-202ENST00000296446 TIAM1Q13009 1591 aa19.83■□□□□ 0.76
PRKAR2A-202ENST00000296446 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
PRKAR2A-202ENST00000296446 SUPT16HQ9Y5B9 1047 aaKnown RBP19.8■□□□□ 0.76
PRKAR2A-202ENST00000296446 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
PRKAR2A-202ENST00000296446 FMN1Q68DA7 1419 aa19.78■□□□□ 0.76
PRKAR2A-202ENST00000296446 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
PRKAR2A-202ENST00000296446 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
PRKAR2A-202ENST00000296446 TSHZ2Q9NRE2 1034 aa19.71■□□□□ 0.75
PRKAR2A-202ENST00000296446 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
PRKAR2A-202ENST00000296446 FGD6Q6ZV73 1430 aa19.7■□□□□ 0.74
PRKAR2A-202ENST00000296446 BCL11AQ9H165 835 aa19.7■□□□□ 0.74
PRKAR2A-202ENST00000296446 ANP32CO43423 234 aa19.68■□□□□ 0.74
PRKAR2A-202ENST00000296446 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
PRKAR2A-202ENST00000296446 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
PRKAR2A-202ENST00000296446 CFDP1Q9UEE9 299 aaPredicted RBP19.67■□□□□ 0.74
PRKAR2A-202ENST00000296446 ANP32EQ9BTT0 268 aa19.66■□□□□ 0.74
PRKAR2A-202ENST00000296446 NCOA2Q15596 1464 aa19.65■□□□□ 0.74
PRKAR2A-202ENST00000296446 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
PRKAR2A-202ENST00000296446 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
PRKAR2A-202ENST00000296446 CDK13Q14004 1512 aaKnown RBP19.64■□□□□ 0.73
PRKAR2A-202ENST00000296446 FYCO1Q9BQS8 1478 aa19.62■□□□□ 0.73
PRKAR2A-202ENST00000296446 KIF21AQ7Z4S6 1674 aa19.62■□□□□ 0.73
PRKAR2A-202ENST00000296446 KDM2AQ9Y2K7 1162 aa19.61■□□□□ 0.73
PRKAR2A-202ENST00000296446 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
PRKAR2A-202ENST00000296446 JPH4Q96JJ6 628 aa19.61■□□□□ 0.73
PRKAR2A-202ENST00000296446 CCDC18Q5T9S5 1454 aa19.6■□□□□ 0.73
PRKAR2A-202ENST00000296446 MPHOSPH9Q99550 1183 aa19.6■□□□□ 0.73
PRKAR2A-202ENST00000296446 MAPKBP1O60336 1514 aa19.59■□□□□ 0.73
PRKAR2A-202ENST00000296446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.73
PRKAR2A-202ENST00000296446 IRX6P78412 446 aaPredicted RBP19.58■□□□□ 0.72
PRKAR2A-202ENST00000296446 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
PRKAR2A-202ENST00000296446 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
PRKAR2A-202ENST00000296446 L3MBTL2Q969R5 705 aa19.56■□□□□ 0.72
PRKAR2A-202ENST00000296446 MYOM3Q5VTT5 1437 aa19.56■□□□□ 0.72
PRKAR2A-202ENST00000296446 FKBP8Q14318 412 aa19.56■□□□□ 0.72
PRKAR2A-202ENST00000296446 HSPA5P11021 654 aaKnown RBP19.53■□□□□ 0.72
PRKAR2A-202ENST00000296446 PLEKHD1A6NEE1 506 aa19.53■□□□□ 0.72
PRKAR2A-202ENST00000296446 FAM9BQ8IZU0 186 aa19.52■□□□□ 0.72
PRKAR2A-202ENST00000296446 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.71
PRKAR2A-202ENST00000296446 MRC2Q9UBG0 1479 aa19.52■□□□□ 0.71
PRKAR2A-202ENST00000296446 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
PRKAR2A-202ENST00000296446 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
PRKAR2A-202ENST00000296446 HNRNPMP52272 730 aaKnown RBP eCLIP19.5■□□□□ 0.71
PRKAR2A-202ENST00000296446 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
PRKAR2A-202ENST00000296446 PRG4Q92954 1404 aaPredicted RBP19.48■□□□□ 0.71
PRKAR2A-202ENST00000296446 RGL3Q3MIN7 710 aa19.48■□□□□ 0.71
PRKAR2A-202ENST00000296446 NAIPQ13075 1403 aa19.48■□□□□ 0.71
PRKAR2A-202ENST00000296446 CUL7Q14999 1698 aa19.48■□□□□ 0.71
PRKAR2A-202ENST00000296446 EIF4G2P78344 907 aaKnown RBP eCLIP19.46■□□□□ 0.71
PRKAR2A-202ENST00000296446 NEFLP07196 543 aa19.45■□□□□ 0.7
PRKAR2A-202ENST00000296446 EPRSP07814 1512 aaKnown RBP19.44■□□□□ 0.7
PRKAR2A-202ENST00000296446 PKD2Q13563 968 aa19.43■□□□□ 0.7
PRKAR2A-202ENST00000296446 MAGI3Q5TCQ9 1506 aa19.43■□□□□ 0.7
PRKAR2A-202ENST00000296446 PLB1Q6P1J6 1458 aa19.43■□□□□ 0.7
PRKAR2A-202ENST00000296446 TSPY4P0CV99 314 aa19.43■□□□□ 0.7
PRKAR2A-202ENST00000296446 TSPY10P0CW01 314 aa19.43■□□□□ 0.7
PRKAR2A-202ENST00000296446 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
PRKAR2A-202ENST00000296446 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
PRKAR2A-202ENST00000296446 UACAQ9BZF9 1416 aa19.4■□□□□ 0.7
PRKAR2A-202ENST00000296446 CTTNBP2Q8WZ74 1663 aa19.4■□□□□ 0.7
PRKAR2A-202ENST00000296446 HFM1A2PYH4 1435 aa19.4■□□□□ 0.7
PRKAR2A-202ENST00000296446 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.7
PRKAR2A-202ENST00000296446 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
PRKAR2A-202ENST00000296446 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms