RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
CAPN2-201ENST00000295006 MTUS2Q5JR59 1369 aa21.64■■□□□ 1.06
CAPN2-201ENST00000295006 ZNF326Q5BKZ1 582 aaKnown RBP21.64■■□□□ 1.05
CAPN2-201ENST00000295006 PRXQ9BXM0 1461 aa21.64■■□□□ 1.05
CAPN2-201ENST00000295006 SETD5Q9C0A6 1442 aa21.64■■□□□ 1.05
CAPN2-201ENST00000295006 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
CAPN2-201ENST00000295006 IGF1RP08069 1367 aa21.61■■□□□ 1.05
CAPN2-201ENST00000295006 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
CAPN2-201ENST00000295006 TOP2BQ02880 1626 aa21.6■■□□□ 1.05
CAPN2-201ENST00000295006 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
CAPN2-201ENST00000295006 FHOD3Q2V2M9 1422 aa21.59■■□□□ 1.05
CAPN2-201ENST00000295006 CUX1P39880 1505 aa21.59■■□□□ 1.05
CAPN2-201ENST00000295006 PHLDB1Q86UU1 1377 aa21.56■■□□□ 1.04
CAPN2-201ENST00000295006 TSHZ2Q9NRE2 1034 aa21.55■■□□□ 1.04
CAPN2-201ENST00000295006 FAM9BQ8IZU0 186 aa21.54■■□□□ 1.04
CAPN2-201ENST00000295006 PPP1R15AO75807 674 aaPredicted RBP21.5■■□□□ 1.03
CAPN2-201ENST00000295006 FOXD1Q16676 465 aa21.5■■□□□ 1.03
CAPN2-201ENST00000295006 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
CAPN2-201ENST00000295006 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
CAPN2-201ENST00000295006 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
CAPN2-201ENST00000295006 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
CAPN2-201ENST00000295006 ZNF777Q9ULD5 760 aaPredicted RBP21.47■■□□□ 1.03
CAPN2-201ENST00000295006 FBLN2P98095 1184 aa21.46■■□□□ 1.03
CAPN2-201ENST00000295006 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
CAPN2-201ENST00000295006 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
CAPN2-201ENST00000295006 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
CAPN2-201ENST00000295006 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
CAPN2-201ENST00000295006 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
CAPN2-201ENST00000295006 CFTRP13569 1480 aa21.4■■□□□ 1.02
CAPN2-201ENST00000295006 LRRC9Q6ZRR7 1453 aa21.36■■□□□ 1.01
CAPN2-201ENST00000295006 CDK11AQ9UQ88 783 aaPredicted RBP21.36■■□□□ 1.01
CAPN2-201ENST00000295006 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
CAPN2-201ENST00000295006 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1
CAPN2-201ENST00000295006 WDR97A6NE52 1622 aa21.32■■□□□ 1
CAPN2-201ENST00000295006 HSPA5P11021 654 aaKnown RBP21.31■■□□□ 1
CAPN2-201ENST00000295006 ANP32EQ9BTT0 268 aa21.28■■□□□ 1
CAPN2-201ENST00000295006 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
CAPN2-201ENST00000295006 RBM19Q9Y4C8 960 aaKnown RBP21.28■■□□□ 1
CAPN2-201ENST00000295006 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
CAPN2-201ENST00000295006 SALL2Q9Y467 1007 aaPredicted RBP21.27■□□□□ 0.99
CAPN2-201ENST00000295006 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
CAPN2-201ENST00000295006 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
CAPN2-201ENST00000295006 CCER2I3L3R5 266 aa21.24■□□□□ 0.99
CAPN2-201ENST00000295006 TIAM1Q13009 1591 aa21.23■□□□□ 0.99
CAPN2-201ENST00000295006 NESP48681 1621 aa21.22■□□□□ 0.99
CAPN2-201ENST00000295006 KDM2AQ9Y2K7 1162 aa21.21■□□□□ 0.99
CAPN2-201ENST00000295006 L3MBTL2Q969R5 705 aa21.2■□□□□ 0.98
CAPN2-201ENST00000295006 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
CAPN2-201ENST00000295006 B4GALNT3Q6L9W6 998 aa21.18■□□□□ 0.98
CAPN2-201ENST00000295006 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
CAPN2-201ENST00000295006 MAPKBP1O60336 1514 aa21.17■□□□□ 0.98
CAPN2-201ENST00000295006 CCDC18Q5T9S5 1454 aa21.17■□□□□ 0.98
CAPN2-201ENST00000295006 MPHOSPH9Q99550 1183 aa21.17■□□□□ 0.98
CAPN2-201ENST00000295006 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
CAPN2-201ENST00000295006 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
CAPN2-201ENST00000295006 CCDC184Q52MB2 194 aa21.11■□□□□ 0.97
CAPN2-201ENST00000295006 PCF11O94913 1555 aaKnown RBP21.09■□□□□ 0.97
CAPN2-201ENST00000295006 ZNF644Q9H582 1327 aaPredicted RBP21.07■□□□□ 0.96
CAPN2-201ENST00000295006 WASHC2AQ641Q2 1341 aa21.06■□□□□ 0.96
CAPN2-201ENST00000295006 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
CAPN2-201ENST00000295006 CFDP1Q9UEE9 299 aaPredicted RBP21.05■□□□□ 0.96
CAPN2-201ENST00000295006 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
CAPN2-201ENST00000295006 TMC1Q8TDI8 760 aa21.03■□□□□ 0.96
CAPN2-201ENST00000295006 NCOA2Q15596 1464 aa21■□□□□ 0.95
CAPN2-201ENST00000295006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21■□□□□ 0.951e-6■■■■■ 30.7
CAPN2-201ENST00000295006 PTPRKQ15262 1439 aa21■□□□□ 0.95
CAPN2-201ENST00000295006 UACAQ9BZF9 1416 aa21■□□□□ 0.95
CAPN2-201ENST00000295006 NBR1Q14596 966 aa20.99■□□□□ 0.95
CAPN2-201ENST00000295006 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
CAPN2-201ENST00000295006 RGL3Q3MIN7 710 aa20.98■□□□□ 0.95
CAPN2-201ENST00000295006 NPM2Q86SE8 214 aaKnown RBP20.98■□□□□ 0.95
CAPN2-201ENST00000295006 CCDC136Q96JN2 1154 aa20.98■□□□□ 0.95
CAPN2-201ENST00000295006 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
CAPN2-201ENST00000295006 MYOM3Q5VTT5 1437 aa20.97■□□□□ 0.95
CAPN2-201ENST00000295006 C11orf95C9JLR9 678 aaPredicted RBP20.96■□□□□ 0.95
CAPN2-201ENST00000295006 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
CAPN2-201ENST00000295006 MYT1LQ9UL68 1186 aa20.96■□□□□ 0.95
CAPN2-201ENST00000295006 GAPVD1Q14C86 1478 aa20.95■□□□□ 0.94
CAPN2-201ENST00000295006 CC2D2AQ9P2K1 1620 aa20.95■□□□□ 0.94
CAPN2-201ENST00000295006 PRKRIP1Q9H875 184 aaPredicted RBP20.95■□□□□ 0.94
CAPN2-201ENST00000295006 PPP4R2Q9NY27 417 aa20.95■□□□□ 0.94
CAPN2-201ENST00000295006 PKD2Q13563 968 aa20.92■□□□□ 0.94
CAPN2-201ENST00000295006 NAIPQ13075 1403 aa20.92■□□□□ 0.94
CAPN2-201ENST00000295006 NBPF8Q3BBV2 869 aa20.92■□□□□ 0.94
CAPN2-201ENST00000295006 CARD11Q9BXL7 1154 aa20.91■□□□□ 0.94
CAPN2-201ENST00000295006 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.943e-7■■■■□ 23
CAPN2-201ENST00000295006 HFM1A2PYH4 1435 aa20.89■□□□□ 0.93
CAPN2-201ENST00000295006 TSPY4P0CV99 314 aa20.88■□□□□ 0.93
CAPN2-201ENST00000295006 TSPY10P0CW01 314 aa20.88■□□□□ 0.93
CAPN2-201ENST00000295006 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
CAPN2-201ENST00000295006 MAP3K1Q13233 1512 aa20.85■□□□□ 0.93
CAPN2-201ENST00000295006 DCAF11Q8TEB1 546 aa20.85■□□□□ 0.93
CAPN2-201ENST00000295006 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.92
CAPN2-201ENST00000295006 KIF7Q2M1P5 1343 aa20.82■□□□□ 0.92
CAPN2-201ENST00000295006 PLEKHD1A6NEE1 506 aa20.82■□□□□ 0.92
CAPN2-201ENST00000295006 CCDC7Q96M83 1385 aa20.79■□□□□ 0.92
CAPN2-201ENST00000295006 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
CAPN2-201ENST00000295006 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
CAPN2-201ENST00000295006 ANP32AP39687 249 aaKnown RBP20.77■□□□□ 0.92
CAPN2-201ENST00000295006 CDK13Q14004 1512 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms