RNA–Protein interactions for RNA: ENST00000291722.11

CACFD1-201, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,688 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-201ENST00000291722 FHOD3Q2V2M9 1422 aa24.15■■□□□ 1.46
CACFD1-201ENST00000291722 ATP1B4Q9UN42 357 aaPredicted RBP24.15■■□□□ 1.46
CACFD1-201ENST00000291722 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
CACFD1-201ENST00000291722 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
CACFD1-201ENST00000291722 DHX57Q6P158 1386 aaKnown RBP24.14■■□□□ 1.46
CACFD1-201ENST00000291722 PCF11O94913 1555 aaKnown RBP24.13■■□□□ 1.45
CACFD1-201ENST00000291722 CUL7Q14999 1698 aa24.11■■□□□ 1.45
CACFD1-201ENST00000291722 PDS5BQ9NTI5 1447 aa24.09■■□□□ 1.45
CACFD1-201ENST00000291722 LRRC9Q6ZRR7 1453 aa24.09■■□□□ 1.45
CACFD1-201ENST00000291722 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
CACFD1-201ENST00000291722 PHLDB1Q86UU1 1377 aa24.06■■□□□ 1.44
CACFD1-201ENST00000291722 MAP3K1Q13233 1512 aa24.05■■□□□ 1.44
CACFD1-201ENST00000291722 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
CACFD1-201ENST00000291722 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
CACFD1-201ENST00000291722 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
CACFD1-201ENST00000291722 CFAP43Q8NDM7 1665 aa24.01■■□□□ 1.43
CACFD1-201ENST00000291722 ACIN1Q9UKV3 1341 aaKnown RBP23.99■■□□□ 1.43
CACFD1-201ENST00000291722 EFCAB5A4FU69 1503 aa23.97■■□□□ 1.43
CACFD1-201ENST00000291722 FAM50AQ14320 339 aaKnown RBP23.95■■□□□ 1.42
CACFD1-201ENST00000291722 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
CACFD1-201ENST00000291722 TARBP1Q13395 1621 aaKnown RBP23.93■■□□□ 1.42
CACFD1-201ENST00000291722 RAB3GAP2Q9H2M9 1393 aa23.93■■□□□ 1.42
CACFD1-201ENST00000291722 FYCO1Q9BQS8 1478 aa23.93■■□□□ 1.42
CACFD1-201ENST00000291722 CASKIN1Q8WXD9 1431 aa23.92■■□□□ 1.42
CACFD1-201ENST00000291722 CLSPNQ9HAW4 1339 aa23.92■■□□□ 1.42
CACFD1-201ENST00000291722 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
CACFD1-201ENST00000291722 MIER1Q8N108 512 aa23.87■■□□□ 1.41
CACFD1-201ENST00000291722 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.41
CACFD1-201ENST00000291722 SAMD9Q5K651 1589 aa23.85■■□□□ 1.41
CACFD1-201ENST00000291722 LRRIQ1Q96JM4 1722 aa23.84■■□□□ 1.41
CACFD1-201ENST00000291722 GTF3C3Q9Y5Q9 886 aa23.84■■□□□ 1.41
CACFD1-201ENST00000291722 FMN1Q68DA7 1419 aa23.84■■□□□ 1.41
CACFD1-201ENST00000291722 SETD5Q9C0A6 1442 aa23.81■■□□□ 1.4
CACFD1-201ENST00000291722 PBRM1Q86U86 1689 aa23.81■■□□□ 1.4
CACFD1-201ENST00000291722 MAPKBP1O60336 1514 aa23.8■■□□□ 1.4
CACFD1-201ENST00000291722 YTHDC1Q96MU7 727 aaKnown RBP23.77■■□□□ 1.4
CACFD1-201ENST00000291722 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
CACFD1-201ENST00000291722 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
CACFD1-201ENST00000291722 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
CACFD1-201ENST00000291722 ZNF608Q9ULD9 1512 aaPredicted RBP23.72■■□□□ 1.39
CACFD1-201ENST00000291722 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.38
CACFD1-201ENST00000291722 FGD6Q6ZV73 1430 aa23.69■■□□□ 1.38
CACFD1-201ENST00000291722 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
CACFD1-201ENST00000291722 SIN3AQ96ST3 1273 aa23.69■■□□□ 1.38
CACFD1-201ENST00000291722 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.38
CACFD1-201ENST00000291722 ARID3CA6NKF2 412 aa23.64■■□□□ 1.38
CACFD1-201ENST00000291722 NCOA2Q15596 1464 aa23.64■■□□□ 1.38
CACFD1-201ENST00000291722 PTPRKQ15262 1439 aa23.64■■□□□ 1.37
CACFD1-201ENST00000291722 IQGAP2Q13576 1575 aa23.63■■□□□ 1.37
CACFD1-201ENST00000291722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.37
CACFD1-201ENST00000291722 WDR62O43379 1518 aa23.58■■□□□ 1.37
CACFD1-201ENST00000291722 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
CACFD1-201ENST00000291722 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
CACFD1-201ENST00000291722 SUPT6HQ7KZ85 1726 aaKnown RBP23.57■■□□□ 1.36
CACFD1-201ENST00000291722 MYOM3Q5VTT5 1437 aa23.56■■□□□ 1.36
CACFD1-201ENST00000291722 EHBP1L1Q8N3D4 1523 aa23.55■■□□□ 1.36
CACFD1-201ENST00000291722 CDK13Q14004 1512 aaKnown RBP23.54■■□□□ 1.36
CACFD1-201ENST00000291722 UGGT2Q9NYU1 1516 aa23.52■■□□□ 1.35
CACFD1-201ENST00000291722 HECW1Q76N89 1606 aa23.5■■□□□ 1.35
CACFD1-201ENST00000291722 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
CACFD1-201ENST00000291722 CCDC18Q5T9S5 1454 aa23.49■■□□□ 1.35
CACFD1-201ENST00000291722 EIF4G3O43432 1585 aaKnown RBP23.49■■□□□ 1.35
CACFD1-201ENST00000291722 BCL11AQ9H165 835 aa23.49■■□□□ 1.35
CACFD1-201ENST00000291722 PTPN23Q9H3S7 1636 aa23.49■■□□□ 1.35
CACFD1-201ENST00000291722 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
CACFD1-201ENST00000291722 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
CACFD1-201ENST00000291722 HFM1A2PYH4 1435 aa23.46■■□□□ 1.35
CACFD1-201ENST00000291722 CHIC2Q9UKJ5 165 aa23.46■■□□□ 1.35
CACFD1-201ENST00000291722 NAIPQ13075 1403 aa23.44■■□□□ 1.34
CACFD1-201ENST00000291722 DISP1Q96F81 1524 aa23.43■■□□□ 1.34
CACFD1-201ENST00000291722 RRP7BPQ9NSQ0 103 aa23.42■■□□□ 1.34
CACFD1-201ENST00000291722 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
CACFD1-201ENST00000291722 KIAA0586Q9BVV6 1533 aa23.41■■□□□ 1.34
CACFD1-201ENST00000291722 KIAA0556O60303 1618 aa23.4■■□□□ 1.34
CACFD1-201ENST00000291722 HIRIP3Q9BW71 556 aaPredicted RBP23.39■■□□□ 1.34
CACFD1-201ENST00000291722 UACAQ9BZF9 1416 aa23.37■■□□□ 1.33
CACFD1-201ENST00000291722 FBLN2P98095 1184 aa23.36■■□□□ 1.33
CACFD1-201ENST00000291722 PPP1R15AO75807 674 aaPredicted RBP23.35■■□□□ 1.33
CACFD1-201ENST00000291722 TCOF1Q13428 1488 aaKnown RBP23.34■■□□□ 1.33
CACFD1-201ENST00000291722 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.32
CACFD1-201ENST00000291722 KDM6BO15054 1643 aa23.32■■□□□ 1.32
CACFD1-201ENST00000291722 NUP153P49790 1475 aaKnown RBP23.32■■□□□ 1.32
CACFD1-201ENST00000291722 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
CACFD1-201ENST00000291722 KCNH8Q96L42 1107 aa23.28■■□□□ 1.32
CACFD1-201ENST00000291722 DDX10Q13206 875 aaKnown RBP23.28■■□□□ 1.32
CACFD1-201ENST00000291722 TIMELESSQ9UNS1 1208 aa23.28■■□□□ 1.32
CACFD1-201ENST00000291722 RAPGEF6Q8TEU7 1601 aa23.28■■□□□ 1.32
CACFD1-201ENST00000291722 ZNF644Q9H582 1327 aaPredicted RBP23.27■■□□□ 1.32
CACFD1-201ENST00000291722 TONSLQ96HA7 1378 aa23.27■■□□□ 1.32
CACFD1-201ENST00000291722 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
CACFD1-201ENST00000291722 SYNJ2O15056 1496 aa23.25■■□□□ 1.31
CACFD1-201ENST00000291722 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
CACFD1-201ENST00000291722 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
CACFD1-201ENST00000291722 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
CACFD1-201ENST00000291722 DENND4BO75064 1496 aaPredicted RBP23.24■■□□□ 1.31
CACFD1-201ENST00000291722 PLB1Q6P1J6 1458 aa23.23■■□□□ 1.31
CACFD1-201ENST00000291722 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.31
CACFD1-201ENST00000291722 FOXD1Q16676 465 aa23.18■■□□□ 1.3
CACFD1-201ENST00000291722 KDM5BQ9UGL1 1544 aa23.16■■□□□ 1.3
CACFD1-201ENST00000291722 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms