RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 KDM2AQ9Y2K7 1162 aa25.02■■□□□ 1.6
SIM2-201ENST00000290399 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
SIM2-201ENST00000290399 ATAD2BQ9ULI0 1458 aa24.99■■□□□ 1.59
SIM2-201ENST00000290399 EIF4G2P78344 907 aaKnown RBP eCLIP24.98■■□□□ 1.59
SIM2-201ENST00000290399 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
SIM2-201ENST00000290399 PLEKHD1A6NEE1 506 aa24.96■■□□□ 1.59
SIM2-201ENST00000290399 RUSC2Q8N2Y8 1516 aa24.96■■□□□ 1.59
SIM2-201ENST00000290399 CHGAP10645 457 aaKnown RBP24.93■■□□□ 1.58
SIM2-201ENST00000290399 MRS2Q9HD23 443 aa24.93■■□□□ 1.58
SIM2-201ENST00000290399 CFDP1Q9UEE9 299 aaPredicted RBP24.92■■□□□ 1.58
SIM2-201ENST00000290399 RTL5Q5HYW3 569 aaPredicted RBP24.92■■□□□ 1.58
SIM2-201ENST00000290399 SALL2Q9Y467 1007 aaPredicted RBP24.89■■□□□ 1.57
SIM2-201ENST00000290399 TMC1Q8TDI8 760 aa24.88■■□□□ 1.57
SIM2-201ENST00000290399 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
SIM2-201ENST00000290399 KCNH8Q96L42 1107 aa24.87■■□□□ 1.57
SIM2-201ENST00000290399 RAPGEF2Q9Y4G8 1499 aa24.86■■□□□ 1.57
SIM2-201ENST00000290399 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
SIM2-201ENST00000290399 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
SIM2-201ENST00000290399 CANXP27824 592 aaKnown RBP24.79■■□□□ 1.56
SIM2-201ENST00000290399 RGL3Q3MIN7 710 aa24.75■■□□□ 1.55
SIM2-201ENST00000290399 IRX6P78412 446 aaPredicted RBP24.75■■□□□ 1.55
SIM2-201ENST00000290399 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
SIM2-201ENST00000290399 SETD5Q9C0A6 1442 aa24.72■■□□□ 1.55
SIM2-201ENST00000290399 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
SIM2-201ENST00000290399 RAB3GAP2Q9H2M9 1393 aa24.66■■□□□ 1.54
SIM2-201ENST00000290399 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
SIM2-201ENST00000290399 NEFMP07197 916 aa24.65■■□□□ 1.54
SIM2-201ENST00000290399 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
SIM2-201ENST00000290399 STAG3Q9UJ98 1225 aa24.64■■□□□ 1.54
SIM2-201ENST00000290399 TIMELESSQ9UNS1 1208 aa24.64■■□□□ 1.53
SIM2-201ENST00000290399 ANP32AP39687 249 aaKnown RBP24.62■■□□□ 1.53
SIM2-201ENST00000290399 CCDC136Q96JN2 1154 aa24.61■■□□□ 1.53
SIM2-201ENST00000290399 SENP3-EIF4A1A0A087X0R7 540 aa24.6■■□□□ 1.53
SIM2-201ENST00000290399 NPM2Q86SE8 214 aaKnown RBP24.6■■□□□ 1.53
SIM2-201ENST00000290399 ESF1Q9H501 851 aaKnown RBP24.6■■□□□ 1.53
SIM2-201ENST00000290399 BCL11AQ9H165 835 aa24.59■■□□□ 1.53
SIM2-201ENST00000290399 FHOD3Q2V2M9 1422 aa24.58■■□□□ 1.53
SIM2-201ENST00000290399 CARD11Q9BXL7 1154 aa24.58■■□□□ 1.53
SIM2-201ENST00000290399 FMN1Q68DA7 1419 aa24.58■■□□□ 1.52
SIM2-201ENST00000290399 WDR43Q15061 677 aaKnown RBP eCLIP24.54■■□□□ 1.52
SIM2-201ENST00000290399 FOXD1Q16676 465 aa24.51■■□□□ 1.51
SIM2-201ENST00000290399 ZBTB47Q9UFB7 747 aaPredicted RBP24.51■■□□□ 1.51
SIM2-201ENST00000290399 SUPT16HQ9Y5B9 1047 aaKnown RBP24.5■■□□□ 1.51
SIM2-201ENST00000290399 SLC24A1O60721 1099 aa24.48■■□□□ 1.51
SIM2-201ENST00000290399 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
SIM2-201ENST00000290399 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
SIM2-201ENST00000290399 IGF1RP08069 1367 aa24.42■■□□□ 1.5
SIM2-201ENST00000290399 PPP1R15AO75807 674 aaPredicted RBP24.42■■□□□ 1.5
SIM2-201ENST00000290399 PLPPR3Q6T4P5 718 aa24.42■■□□□ 1.5
SIM2-201ENST00000290399 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
SIM2-201ENST00000290399 HSPA5P11021 654 aaKnown RBP24.4■■□□□ 1.5
SIM2-201ENST00000290399 DCAF11Q8TEB1 546 aa24.4■■□□□ 1.5
SIM2-201ENST00000290399 MPHOSPH9Q99550 1183 aa24.39■■□□□ 1.5
SIM2-201ENST00000290399 PKD2Q13563 968 aa24.37■■□□□ 1.49
SIM2-201ENST00000290399 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
SIM2-201ENST00000290399 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.34■■□□□ 1.49
SIM2-201ENST00000290399 CARMIL2Q6F5E8 1435 aa24.32■■□□□ 1.48
SIM2-201ENST00000290399 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
SIM2-201ENST00000290399 CCER2I3L3R5 266 aa24.32■■□□□ 1.48
SIM2-201ENST00000290399 KNSTRNQ9Y448 316 aa24.32■■□□□ 1.48
SIM2-201ENST00000290399 CDCA8Q53HL2 280 aa24.27■■□□□ 1.48
SIM2-201ENST00000290399 L3MBTL2Q969R5 705 aa24.26■■□□□ 1.47
SIM2-201ENST00000290399 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
SIM2-201ENST00000290399 KIF21BO75037 1637 aa24.24■■□□□ 1.47
SIM2-201ENST00000290399 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
SIM2-201ENST00000290399 JPH4Q96JJ6 628 aa24.22■■□□□ 1.47
SIM2-201ENST00000290399 NUP155O75694 1391 aa24.21■■□□□ 1.47
SIM2-201ENST00000290399 CC2D1BQ5T0F9 858 aaKnown RBP24.21■■□□□ 1.47
SIM2-201ENST00000290399 ANKRD30AQ9BXX3 1397 aa24.16■■□□□ 1.46
SIM2-201ENST00000290399 PPP4R2Q9NY27 417 aa24.15■■□□□ 1.46
SIM2-201ENST00000290399 UPF2Q9HAU5 1272 aaKnown RBP24.14■■□□□ 1.45
SIM2-201ENST00000290399 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.45
SIM2-201ENST00000290399 NBR1Q14596 966 aa24.14■■□□□ 1.45
SIM2-201ENST00000290399 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
SIM2-201ENST00000290399 TMF1P82094 1093 aa24.13■■□□□ 1.45
SIM2-201ENST00000290399 CFTRP13569 1480 aa24.12■■□□□ 1.45
SIM2-201ENST00000290399 GAPVD1Q14C86 1478 aa24.11■■□□□ 1.45
SIM2-201ENST00000290399 ARAP1Q96P48 1450 aa24.11■■□□□ 1.45
SIM2-201ENST00000290399 B4GALNT3Q6L9W6 998 aa24.11■■□□□ 1.45
SIM2-201ENST00000290399 PHLDB1Q86UU1 1377 aa24.09■■□□□ 1.45
SIM2-201ENST00000290399 NEUROD2Q15784 382 aa24.09■■□□□ 1.45
SIM2-201ENST00000290399 EFCAB2Q5VUJ9 269 aa24.07■■□□□ 1.44
SIM2-201ENST00000290399 TNNT2P45379 298 aaPredicted RBP24.06■■□□□ 1.44
SIM2-201ENST00000290399 CFAP53Q96M91 514 aa24.06■■□□□ 1.44
SIM2-201ENST00000290399 PRXQ9BXM0 1461 aa24.03■■□□□ 1.44
SIM2-201ENST00000290399 KANK1Q14678 1352 aa24.01■■□□□ 1.43
SIM2-201ENST00000290399 GGT6Q6P531 493 aa24■■□□□ 1.43
SIM2-201ENST00000290399 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
SIM2-201ENST00000290399 PPM1GO15355 546 aaPredicted RBP24■■□□□ 1.43
SIM2-201ENST00000290399 HSP90AA1P07900 732 aaKnown RBP24■■□□□ 1.43
SIM2-201ENST00000290399 LRRC9Q6ZRR7 1453 aa24■■□□□ 1.43
SIM2-201ENST00000290399 ROCK2O75116 1388 aaKnown RBP23.98■■□□□ 1.43
SIM2-201ENST00000290399 FGD6Q6ZV73 1430 aa23.98■■□□□ 1.43
SIM2-201ENST00000290399 POGKQ9P215 609 aa23.96■■□□□ 1.43
SIM2-201ENST00000290399 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
SIM2-201ENST00000290399 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
SIM2-201ENST00000290399 CUX1P39880 1505 aa23.94■■□□□ 1.42
SIM2-201ENST00000290399 RSPH4AQ5TD94 716 aa23.94■■□□□ 1.42
SIM2-201ENST00000290399 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.42
SIM2-201ENST00000290399 ZNF644Q9H582 1327 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms