RNA–Protein interactions for RNA: ENST00000284110.1

HS3ST3A1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST3A1, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-201ENST00000284110 NESP48681 1621 aa28.08■■■□□ 2.09
HS3ST3A1-201ENST00000284110 VPS8Q8N3P4 1428 aa28.07■■■□□ 2.08
HS3ST3A1-201ENST00000284110 CUX2O14529 1486 aa28.04■■■□□ 2.08
HS3ST3A1-201ENST00000284110 FANCD2Q9BXW9 1451 aa28.01■■■□□ 2.08
HS3ST3A1-201ENST00000284110 FGD5Q6ZNL6 1462 aa28.01■■■□□ 2.07
HS3ST3A1-201ENST00000284110 ERICH3Q5RHP9 1530 aa28.01■■■□□ 2.07
HS3ST3A1-201ENST00000284110 IGF1RP08069 1367 aa27.95■■■□□ 2.07
HS3ST3A1-201ENST00000284110 HNRNPUL2Q1KMD3 747 aaKnown RBP27.94■■■□□ 2.06
HS3ST3A1-201ENST00000284110 PKNOX2Q96KN3 472 aa27.94■■■□□ 2.06
HS3ST3A1-201ENST00000284110 PLEKHG5O94827 1062 aa27.91■■■□□ 2.06
HS3ST3A1-201ENST00000284110 ARAP1Q96P48 1450 aa27.89■■■□□ 2.06
HS3ST3A1-201ENST00000284110 RAD54L2Q9Y4B4 1467 aa27.87■■■□□ 2.05
HS3ST3A1-201ENST00000284110 FANCIQ9NVI1 1328 aa27.83■■■□□ 2.05
HS3ST3A1-201ENST00000284110 KANK4Q5T7N3 995 aaPredicted RBP27.82■■■□□ 2.04
HS3ST3A1-201ENST00000284110 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
HS3ST3A1-201ENST00000284110 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.77■■■□□ 2.04
HS3ST3A1-201ENST00000284110 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
HS3ST3A1-201ENST00000284110 ARHGAP35Q9NRY4 1499 aa27.76■■■□□ 2.03
HS3ST3A1-201ENST00000284110 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
HS3ST3A1-201ENST00000284110 BCANQ96GW7 911 aa27.74■■■□□ 2.03
HS3ST3A1-201ENST00000284110 DNMBPQ6XZF7 1577 aa27.73■■■□□ 2.03
HS3ST3A1-201ENST00000284110 P3H3Q8IVL6 736 aa27.68■■■□□ 2.02
HS3ST3A1-201ENST00000284110 PODXL2Q9NZ53 605 aa27.66■■■□□ 2.02
HS3ST3A1-201ENST00000284110 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
HS3ST3A1-201ENST00000284110 LAMC3Q9Y6N6 1575 aa27.63■■■□□ 2.01
HS3ST3A1-201ENST00000284110 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
HS3ST3A1-201ENST00000284110 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
HS3ST3A1-201ENST00000284110 IL27Q8NEV9 243 aa27.56■■■□□ 2
HS3ST3A1-201ENST00000284110 FKBP8Q14318 412 aa27.56■■■□□ 2
HS3ST3A1-201ENST00000284110 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
HS3ST3A1-201ENST00000284110 ATP1B4Q9UN42 357 aaPredicted RBP27.51■■■□□ 2
HS3ST3A1-201ENST00000284110 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
HS3ST3A1-201ENST00000284110 ITGAEP38570 1179 aa27.45■■□□□ 1.99
HS3ST3A1-201ENST00000284110 RTN4Q9NQC3 1192 aaKnown RBP27.43■■□□□ 1.98
HS3ST3A1-201ENST00000284110 FHOD3Q2V2M9 1422 aa27.4■■□□□ 1.98
HS3ST3A1-201ENST00000284110 GAPVD1Q14C86 1478 aa27.35■■□□□ 1.97
HS3ST3A1-201ENST00000284110 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
HS3ST3A1-201ENST00000284110 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
HS3ST3A1-201ENST00000284110 CUL7Q14999 1698 aa27.31■■□□□ 1.96
HS3ST3A1-201ENST00000284110 CCNB3Q8WWL7 1395 aa27.3■■□□□ 1.96
HS3ST3A1-201ENST00000284110 TIAM1Q13009 1591 aa27.3■■□□□ 1.96
HS3ST3A1-201ENST00000284110 ABCA5Q8WWZ7 1642 aa27.28■■□□□ 1.96
HS3ST3A1-201ENST00000284110 PCF11O94913 1555 aaKnown RBP27.27■■□□□ 1.96
HS3ST3A1-201ENST00000284110 FHAD1B1AJZ9 1412 aa27.25■■□□□ 1.95
HS3ST3A1-201ENST00000284110 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
HS3ST3A1-201ENST00000284110 AQRO60306 1485 aaKnown RBP eCLIP27.23■■□□□ 1.95
HS3ST3A1-201ENST00000284110 NBR1Q14596 966 aa27.22■■□□□ 1.95
HS3ST3A1-201ENST00000284110 PHLDB1Q86UU1 1377 aa27.21■■□□□ 1.95
HS3ST3A1-201ENST00000284110 CTTNBP2Q8WZ74 1663 aa27.21■■□□□ 1.95
HS3ST3A1-201ENST00000284110 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
HS3ST3A1-201ENST00000284110 NEFLP07196 543 aa27.2■■□□□ 1.95
HS3ST3A1-201ENST00000284110 DHX57Q6P158 1386 aaKnown RBP27.19■■□□□ 1.94
HS3ST3A1-201ENST00000284110 FAM50AQ14320 339 aaKnown RBP27.17■■□□□ 1.94
HS3ST3A1-201ENST00000284110 MAP3K1Q13233 1512 aa27.14■■□□□ 1.94
HS3ST3A1-201ENST00000284110 EFCAB5A4FU69 1503 aa27.12■■□□□ 1.93
HS3ST3A1-201ENST00000284110 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
HS3ST3A1-201ENST00000284110 CDK11AQ9UQ88 783 aaPredicted RBP27.1■■□□□ 1.93
HS3ST3A1-201ENST00000284110 CASKIN1Q8WXD9 1431 aa27.09■■□□□ 1.93
HS3ST3A1-201ENST00000284110 NOP58Q9Y2X3 529 aaKnown RBP27.08■■□□□ 1.93
HS3ST3A1-201ENST00000284110 FYCO1Q9BQS8 1478 aa27.07■■□□□ 1.92
HS3ST3A1-201ENST00000284110 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
HS3ST3A1-201ENST00000284110 CFAP43Q8NDM7 1665 aa27.06■■□□□ 1.92
HS3ST3A1-201ENST00000284110 FMN1Q68DA7 1419 aa27.04■■□□□ 1.92
HS3ST3A1-201ENST00000284110 ZMYND15Q9H091 742 aa27.04■■□□□ 1.92
HS3ST3A1-201ENST00000284110 RAB3GAP2Q9H2M9 1393 aa27.02■■□□□ 1.92
HS3ST3A1-201ENST00000284110 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.92
HS3ST3A1-201ENST00000284110 PBRM1Q86U86 1689 aa27.01■■□□□ 1.91
HS3ST3A1-201ENST00000284110 KCNH8Q96L42 1107 aa26.98■■□□□ 1.91
HS3ST3A1-201ENST00000284110 ARID3CA6NKF2 412 aa26.98■■□□□ 1.91
HS3ST3A1-201ENST00000284110 C11orf95C9JLR9 678 aaPredicted RBP26.98■■□□□ 1.91
HS3ST3A1-201ENST00000284110 SAMD9Q5K651 1589 aa26.98■■□□□ 1.91
HS3ST3A1-201ENST00000284110 RTL5Q5HYW3 569 aaPredicted RBP26.97■■□□□ 1.91
HS3ST3A1-201ENST00000284110 PAK3O75914 559 aaPredicted RBP26.97■■□□□ 1.91
HS3ST3A1-201ENST00000284110 GLIPR1L2Q4G1C9 344 aa26.95■■□□□ 1.91
HS3ST3A1-201ENST00000284110 MTUS2Q5JR59 1369 aa26.94■■□□□ 1.9
HS3ST3A1-201ENST00000284110 LRRIQ1Q96JM4 1722 aa26.92■■□□□ 1.9
HS3ST3A1-201ENST00000284110 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
HS3ST3A1-201ENST00000284110 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
HS3ST3A1-201ENST00000284110 ADAMTS12P58397 1594 aa26.89■■□□□ 1.9
HS3ST3A1-201ENST00000284110 SETD5Q9C0A6 1442 aa26.88■■□□□ 1.89
HS3ST3A1-201ENST00000284110 WDR62O43379 1518 aa26.88■■□□□ 1.89
HS3ST3A1-201ENST00000284110 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
HS3ST3A1-201ENST00000284110 TIMELESSQ9UNS1 1208 aa26.87■■□□□ 1.89
HS3ST3A1-201ENST00000284110 VSIG10Q8N0Z9 540 aa26.84■■□□□ 1.89
HS3ST3A1-201ENST00000284110 RSPH6AQ9H0K4 717 aa26.84■■□□□ 1.89
HS3ST3A1-201ENST00000284110 WASHC2AQ641Q2 1341 aa26.84■■□□□ 1.89
HS3ST3A1-201ENST00000284110 IQGAP2Q13576 1575 aa26.83■■□□□ 1.89
HS3ST3A1-201ENST00000284110 FGD6Q6ZV73 1430 aa26.81■■□□□ 1.88
HS3ST3A1-201ENST00000284110 FBLN2P98095 1184 aa26.79■■□□□ 1.88
HS3ST3A1-201ENST00000284110 SIN3AQ96ST3 1273 aa26.78■■□□□ 1.88
HS3ST3A1-201ENST00000284110 WASHC2CQ9Y4E1 1318 aa26.78■■□□□ 1.88
HS3ST3A1-201ENST00000284110 MAPKBP1O60336 1514 aa26.77■■□□□ 1.88
HS3ST3A1-201ENST00000284110 NCOA2Q15596 1464 aa26.77■■□□□ 1.88
HS3ST3A1-201ENST00000284110 MAGI3Q5TCQ9 1506 aa26.76■■□□□ 1.87
HS3ST3A1-201ENST00000284110 EIF4G3O43432 1585 aaKnown RBP26.74■■□□□ 1.87
HS3ST3A1-201ENST00000284110 PTPRKQ15262 1439 aa26.73■■□□□ 1.87
HS3ST3A1-201ENST00000284110 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.87
HS3ST3A1-201ENST00000284110 CHMP7Q8WUX9 453 aaPredicted RBP26.69■■□□□ 1.86
HS3ST3A1-201ENST00000284110 MYOM3Q5VTT5 1437 aa26.67■■□□□ 1.86
HS3ST3A1-201ENST00000284110 THOC2Q8NI27 1593 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms