RNA–Protein interactions for RNA: ENST00000282570.3

GMCL1-201, Transcript of germ cell-less, spermatogenesis associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GMCL1, Length 4,191 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMCL1-201ENST00000282570 DAXXQ9UER7 740 aaPredicted RBP19.47■□□□□ 0.71
GMCL1-201ENST00000282570 FKBP8Q14318 412 aa19.45■□□□□ 0.7
GMCL1-201ENST00000282570 CUX2O14529 1486 aa19.45■□□□□ 0.7
GMCL1-201ENST00000282570 RGL3Q3MIN7 710 aa19.44■□□□□ 0.7
GMCL1-201ENST00000282570 CARMIL1Q5VZK9 1371 aa19.42■□□□□ 0.7
GMCL1-201ENST00000282570 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
GMCL1-201ENST00000282570 TDRD9Q8NDG6 1382 aaKnown RBP19.4■□□□□ 0.7
GMCL1-201ENST00000282570 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
GMCL1-201ENST00000282570 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
GMCL1-201ENST00000282570 IRX6P78412 446 aaPredicted RBP19.38■□□□□ 0.69
GMCL1-201ENST00000282570 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
GMCL1-201ENST00000282570 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
GMCL1-201ENST00000282570 MRS2Q9HD23 443 aa19.3■□□□□ 0.68
GMCL1-201ENST00000282570 STAG3Q9UJ98 1225 aa19.29■□□□□ 0.68
GMCL1-201ENST00000282570 FOXD1Q16676 465 aa19.26■□□□□ 0.67
GMCL1-201ENST00000282570 TMC1Q8TDI8 760 aa19.26■□□□□ 0.67
GMCL1-201ENST00000282570 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
GMCL1-201ENST00000282570 CCNB3Q8WWL7 1395 aa19.25■□□□□ 0.67
GMCL1-201ENST00000282570 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
GMCL1-201ENST00000282570 ESF1Q9H501 851 aaKnown RBP19.23■□□□□ 0.67
GMCL1-201ENST00000282570 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
GMCL1-201ENST00000282570 CANXP27824 592 aaKnown RBP19.22■□□□□ 0.67
GMCL1-201ENST00000282570 VPS8Q8N3P4 1428 aa19.21■□□□□ 0.67
GMCL1-201ENST00000282570 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
GMCL1-201ENST00000282570 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
GMCL1-201ENST00000282570 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
GMCL1-201ENST00000282570 NPM2Q86SE8 214 aaKnown RBP19.16■□□□□ 0.66
GMCL1-201ENST00000282570 SMARCA2P51531 1590 aa19.14■□□□□ 0.65
GMCL1-201ENST00000282570 PLEKHG5O94827 1062 aa19.13■□□□□ 0.65
GMCL1-201ENST00000282570 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
GMCL1-201ENST00000282570 SMARCA4P51532 1647 aa19.09■□□□□ 0.65
GMCL1-201ENST00000282570 RTL5Q5HYW3 569 aaPredicted RBP19.07■□□□□ 0.64
GMCL1-201ENST00000282570 CARD11Q9BXL7 1154 aa19.07■□□□□ 0.64
GMCL1-201ENST00000282570 FHOD3Q2V2M9 1422 aa19.06■□□□□ 0.64
GMCL1-201ENST00000282570 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
GMCL1-201ENST00000282570 NEFMP07197 916 aa19.03■□□□□ 0.64
GMCL1-201ENST00000282570 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
GMCL1-201ENST00000282570 DCAF11Q8TEB1 546 aa19■□□□□ 0.63
GMCL1-201ENST00000282570 SUPT16HQ9Y5B9 1047 aaKnown RBP18.99■□□□□ 0.63
GMCL1-201ENST00000282570 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
GMCL1-201ENST00000282570 PDS5BQ9NTI5 1447 aa18.97■□□□□ 0.63
GMCL1-201ENST00000282570 WDR43Q15061 677 aaKnown RBP eCLIP18.96■□□□□ 0.63
GMCL1-201ENST00000282570 SETD5Q9C0A6 1442 aa18.94■□□□□ 0.62
GMCL1-201ENST00000282570 PKD2Q13563 968 aa18.94■□□□□ 0.62
GMCL1-201ENST00000282570 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
GMCL1-201ENST00000282570 ZBTB47Q9UFB7 747 aaPredicted RBP18.92■□□□□ 0.62
GMCL1-201ENST00000282570 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
GMCL1-201ENST00000282570 MLECQ14165 292 aa18.89■□□□□ 0.61
GMCL1-201ENST00000282570 CC2D1BQ5T0F9 858 aaKnown RBP18.89■□□□□ 0.61
GMCL1-201ENST00000282570 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
GMCL1-201ENST00000282570 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
GMCL1-201ENST00000282570 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.61
GMCL1-201ENST00000282570 MPHOSPH9Q99550 1183 aa18.88■□□□□ 0.61
GMCL1-201ENST00000282570 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
GMCL1-201ENST00000282570 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
GMCL1-201ENST00000282570 PPM1GO15355 546 aaPredicted RBP18.87■□□□□ 0.61
GMCL1-201ENST00000282570 GGT6Q6P531 493 aa18.87■□□□□ 0.61
GMCL1-201ENST00000282570 PPP1R15AO75807 674 aaPredicted RBP18.86■□□□□ 0.61
GMCL1-201ENST00000282570 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
GMCL1-201ENST00000282570 SAFB2Q14151 953 aaKnown RBP eCLIP18.86■□□□□ 0.61
GMCL1-201ENST00000282570 DNAJC5BQ9UF47 199 aa18.86■□□□□ 0.61
GMCL1-201ENST00000282570 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
GMCL1-201ENST00000282570 IGF1RP08069 1367 aa18.85■□□□□ 0.61
GMCL1-201ENST00000282570 ANP32AP39687 249 aaKnown RBP18.84■□□□□ 0.61
GMCL1-201ENST00000282570 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
GMCL1-201ENST00000282570 KNSTRNQ9Y448 316 aa18.81■□□□□ 0.6
GMCL1-201ENST00000282570 FMN1Q68DA7 1419 aa18.79■□□□□ 0.6
GMCL1-201ENST00000282570 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
GMCL1-201ENST00000282570 C14orf37Q86TY3 774 aa18.78■□□□□ 0.6
GMCL1-201ENST00000282570 NUP155O75694 1391 aa18.77■□□□□ 0.6
GMCL1-201ENST00000282570 FGD5Q6ZNL6 1462 aa18.75■□□□□ 0.59
GMCL1-201ENST00000282570 NBR1Q14596 966 aa18.74■□□□□ 0.59
GMCL1-201ENST00000282570 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
GMCL1-201ENST00000282570 DHX57Q6P158 1386 aaKnown RBP18.74■□□□□ 0.59
GMCL1-201ENST00000282570 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
GMCL1-201ENST00000282570 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
GMCL1-201ENST00000282570 CARMIL2Q6F5E8 1435 aa18.7■□□□□ 0.58
GMCL1-201ENST00000282570 ANP32EQ9BTT0 268 aa18.7■□□□□ 0.58
GMCL1-201ENST00000282570 STK26Q9P289 416 aa18.7■□□□□ 0.58
GMCL1-201ENST00000282570 NESP48681 1621 aa18.69■□□□□ 0.58
GMCL1-201ENST00000282570 SOX12O15370 315 aa18.68■□□□□ 0.58
GMCL1-201ENST00000282570 KIF3BO15066 747 aa18.68■□□□□ 0.58
GMCL1-201ENST00000282570 POGKQ9P215 609 aa18.67■□□□□ 0.58
GMCL1-201ENST00000282570 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■■■ 28.1
GMCL1-201ENST00000282570 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
GMCL1-201ENST00000282570 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
GMCL1-201ENST00000282570 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
GMCL1-201ENST00000282570 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.64■□□□□ 0.57
GMCL1-201ENST00000282570 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
GMCL1-201ENST00000282570 LAS1LQ9Y4W2 734 aaKnown RBP18.62■□□□□ 0.57
GMCL1-201ENST00000282570 PHLDB1Q86UU1 1377 aa18.61■□□□□ 0.57
GMCL1-201ENST00000282570 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
GMCL1-201ENST00000282570 SYNJ1O43426 1573 aa18.61■□□□□ 0.57
GMCL1-201ENST00000282570 ARXQ96QS3 562 aa18.6■□□□□ 0.57
GMCL1-201ENST00000282570 A0A0G2JS52 829 aa18.6■□□□□ 0.57
GMCL1-201ENST00000282570 TMF1P82094 1093 aa18.6■□□□□ 0.57
GMCL1-201ENST00000282570 FRAT1Q92837 279 aaPredicted RBP18.6■□□□□ 0.57
GMCL1-201ENST00000282570 LMOD2Q6P5Q4 547 aa18.59■□□□□ 0.57
GMCL1-201ENST00000282570 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
GMCL1-201ENST00000282570 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms