RNA–Protein interactions for RNA: ENST00000278886.10

NINL-201, Transcript of ninein like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NINL, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-201ENST00000278886 PLPPR3Q6T4P5 718 aa23.89■■□□□ 1.41
NINL-201ENST00000278886 TMC1Q8TDI8 760 aa23.89■■□□□ 1.41
NINL-201ENST00000278886 HIRIP3Q9BW71 556 aaPredicted RBP23.88■■□□□ 1.41
NINL-201ENST00000278886 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
NINL-201ENST00000278886 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
NINL-201ENST00000278886 CUX2O14529 1486 aa23.87■■□□□ 1.41
NINL-201ENST00000278886 BCL11AQ9H165 835 aa23.87■■□□□ 1.41
NINL-201ENST00000278886 CARMIL1Q5VZK9 1371 aa23.86■■□□□ 1.41
NINL-201ENST00000278886 MIER1Q8N108 512 aa23.83■■□□□ 1.41
NINL-201ENST00000278886 MRS2Q9HD23 443 aa23.82■■□□□ 1.4
NINL-201ENST00000278886 SALL2Q9Y467 1007 aaPredicted RBP23.81■■□□□ 1.4
NINL-201ENST00000278886 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
NINL-201ENST00000278886 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
NINL-201ENST00000278886 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
NINL-201ENST00000278886 ANP32AP39687 249 aaKnown RBP23.72■■□□□ 1.39
NINL-201ENST00000278886 WDR43Q15061 677 aaKnown RBP eCLIP23.71■■□□□ 1.393e-6■■■□□ 15.1
NINL-201ENST00000278886 RGL3Q3MIN7 710 aa23.71■■□□□ 1.39
NINL-201ENST00000278886 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
NINL-201ENST00000278886 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
NINL-201ENST00000278886 EIF4G1Q04637 1599 aaKnown RBP23.64■■□□□ 1.37
NINL-201ENST00000278886 VPS8Q8N3P4 1428 aa23.63■■□□□ 1.37
NINL-201ENST00000278886 WIZO95785 1651 aa23.63■■□□□ 1.37
NINL-201ENST00000278886 NPM2Q86SE8 214 aaKnown RBP23.62■■□□□ 1.37
NINL-201ENST00000278886 SIN3AQ96ST3 1273 aa23.61■■□□□ 1.37
NINL-201ENST00000278886 PDS5BQ9NTI5 1447 aa23.6■■□□□ 1.37
NINL-201ENST00000278886 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.58■■□□□ 1.37
NINL-201ENST00000278886 CCDC136Q96JN2 1154 aa23.58■■□□□ 1.36
NINL-201ENST00000278886 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
NINL-201ENST00000278886 CARD11Q9BXL7 1154 aa23.54■■□□□ 1.36
NINL-201ENST00000278886 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
NINL-201ENST00000278886 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
NINL-201ENST00000278886 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
NINL-201ENST00000278886 KANK4Q5T7N3 995 aaPredicted RBP23.49■■□□□ 1.35
NINL-201ENST00000278886 CDCA8Q53HL2 280 aa23.48■■□□□ 1.35
NINL-201ENST00000278886 ATAD2BQ9ULI0 1458 aa23.48■■□□□ 1.35
NINL-201ENST00000278886 UPF2Q9HAU5 1272 aaKnown RBP23.45■■□□□ 1.34
NINL-201ENST00000278886 IRX6P78412 446 aaPredicted RBP23.44■■□□□ 1.34
NINL-201ENST00000278886 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
NINL-201ENST00000278886 KNSTRNQ9Y448 316 aa23.41■■□□□ 1.34
NINL-201ENST00000278886 TIMELESSQ9UNS1 1208 aa23.4■■□□□ 1.34
NINL-201ENST00000278886 ARID4BQ4LE39 1312 aaPredicted RBP23.4■■□□□ 1.34
NINL-201ENST00000278886 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
NINL-201ENST00000278886 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
NINL-201ENST00000278886 SETD5Q9C0A6 1442 aa23.4■■□□□ 1.34
NINL-201ENST00000278886 FMN1Q68DA7 1419 aa23.39■■□□□ 1.34
NINL-201ENST00000278886 CARMIL2Q6F5E8 1435 aa23.39■■□□□ 1.34
NINL-201ENST00000278886 HSP90AA1P07900 732 aaKnown RBP23.34■■□□□ 1.33
NINL-201ENST00000278886 CFAP53Q96M91 514 aa23.33■■□□□ 1.33
NINL-201ENST00000278886 RAPGEF2Q9Y4G8 1499 aa23.31■■□□□ 1.32
NINL-201ENST00000278886 DCAF11Q8TEB1 546 aa23.3■■□□□ 1.32
NINL-201ENST00000278886 C14orf37Q86TY3 774 aa23.28■■□□□ 1.32
NINL-201ENST00000278886 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
NINL-201ENST00000278886 KANK1Q14678 1352 aa23.26■■□□□ 1.31
NINL-201ENST00000278886 POGKQ9P215 609 aa23.23■■□□□ 1.31
NINL-201ENST00000278886 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
NINL-201ENST00000278886 PKD2Q13563 968 aa23.22■■□□□ 1.31
NINL-201ENST00000278886 FHOD3Q2V2M9 1422 aa23.22■■□□□ 1.31
NINL-201ENST00000278886 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
NINL-201ENST00000278886 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
NINL-201ENST00000278886 MYH16Q9H6N6 1097 aa23.2■■□□□ 1.3
NINL-201ENST00000278886 PPM1GO15355 546 aaPredicted RBP23.19■■□□□ 1.3
NINL-201ENST00000278886 SUPT16HQ9Y5B9 1047 aaKnown RBP23.19■■□□□ 1.3
NINL-201ENST00000278886 TMF1P82094 1093 aa23.18■■□□□ 1.3
NINL-201ENST00000278886 FOXD1Q16676 465 aa23.17■■□□□ 1.3
NINL-201ENST00000278886 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
NINL-201ENST00000278886 EFCAB2Q5VUJ9 269 aa23.16■■□□□ 1.3
NINL-201ENST00000278886 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
NINL-201ENST00000278886 MPHOSPH9Q99550 1183 aa23.14■■□□□ 1.3
NINL-201ENST00000278886 CC2D1BQ5T0F9 858 aaKnown RBP23.14■■□□□ 1.29
NINL-201ENST00000278886 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
NINL-201ENST00000278886 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
NINL-201ENST00000278886 ANKRD30AQ9BXX3 1397 aa23.12■■□□□ 1.29
NINL-201ENST00000278886 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
NINL-201ENST00000278886 GGT6Q6P531 493 aa23.11■■□□□ 1.29
NINL-201ENST00000278886 NUP155O75694 1391 aa23.1■■□□□ 1.29
NINL-201ENST00000278886 MAPK8IP3Q9UPT6 1336 aa23.09■■□□□ 1.29
NINL-201ENST00000278886 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
NINL-201ENST00000278886 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
NINL-201ENST00000278886 MLECQ14165 292 aa23.07■■□□□ 1.28
NINL-201ENST00000278886 ANP32BQ92688 251 aaKnown RBP23.06■■□□□ 1.28
NINL-201ENST00000278886 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
NINL-201ENST00000278886 A0A0G2JS52 829 aa23.04■■□□□ 1.28
NINL-201ENST00000278886 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
NINL-201ENST00000278886 HDGFP51858 240 aaKnown RBP23■■□□□ 1.27
NINL-201ENST00000278886 NBR1Q14596 966 aa23■■□□□ 1.27
NINL-201ENST00000278886 HNRNPMP52272 730 aaKnown RBP eCLIP22.99■■□□□ 1.272e-6■■■□□ 17.9
NINL-201ENST00000278886 FTSJ3Q8IY81 847 aaKnown RBP22.99■■□□□ 1.27
NINL-201ENST00000278886 U2SURPO15042 1029 aaKnown RBP22.98■■□□□ 1.27
NINL-201ENST00000278886 HAP1P54257 671 aaPredicted RBP22.98■■□□□ 1.27
NINL-201ENST00000278886 RSPH4AQ5TD94 716 aa22.98■■□□□ 1.27
NINL-201ENST00000278886 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
NINL-201ENST00000278886 PPP4R2Q9NY27 417 aa22.97■■□□□ 1.27
NINL-201ENST00000278886 LAS1LQ9Y4W2 734 aaKnown RBP22.97■■□□□ 1.27
NINL-201ENST00000278886 TRHP20396 242 aaPredicted RBP22.96■■□□□ 1.27
NINL-201ENST00000278886 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
NINL-201ENST00000278886 LMOD2Q6P5Q4 547 aa22.94■■□□□ 1.26
NINL-201ENST00000278886 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
NINL-201ENST00000278886 FGD5Q6ZNL6 1462 aa22.93■■□□□ 1.26
NINL-201ENST00000278886 KIF3BO15066 747 aa22.93■■□□□ 1.26
NINL-201ENST00000278886 ROCK2O75116 1388 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms