RNA–Protein interactions for RNA: ENST00000276974.7

CNTNAP3B-201, Transcript of contactin associated protein like 3B, humanhuman

TSL 5 BASIC

Gene CNTNAP3B, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-201ENST00000276974 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
CNTNAP3B-201ENST00000276974 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
CNTNAP3B-201ENST00000276974 SETD5Q9C0A6 1442 aa24.17■■□□□ 1.46
CNTNAP3B-201ENST00000276974 MAPKBP1O60336 1514 aa24.16■■□□□ 1.46
CNTNAP3B-201ENST00000276974 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
CNTNAP3B-201ENST00000276974 FHOD3Q2V2M9 1422 aa24.14■■□□□ 1.45
CNTNAP3B-201ENST00000276974 TIAM1Q13009 1591 aa24.13■■□□□ 1.45
CNTNAP3B-201ENST00000276974 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
CNTNAP3B-201ENST00000276974 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
CNTNAP3B-201ENST00000276974 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.45
CNTNAP3B-201ENST00000276974 TRIM52Q96A61 297 aa24.07■■□□□ 1.44
CNTNAP3B-201ENST00000276974 FKBP8Q14318 412 aa24.03■■□□□ 1.44
CNTNAP3B-201ENST00000276974 TSHZ2Q9NRE2 1034 aa24.01■■□□□ 1.43
CNTNAP3B-201ENST00000276974 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
CNTNAP3B-201ENST00000276974 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
CNTNAP3B-201ENST00000276974 FANCD2Q9BXW9 1451 aa23.95■■□□□ 1.42
CNTNAP3B-201ENST00000276974 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
CNTNAP3B-201ENST00000276974 MYT1Q01538 1121 aa23.94■■□□□ 1.42
CNTNAP3B-201ENST00000276974 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
CNTNAP3B-201ENST00000276974 NESP48681 1621 aa23.92■■□□□ 1.42
CNTNAP3B-201ENST00000276974 ANP32CO43423 234 aa23.89■■□□□ 1.42
CNTNAP3B-201ENST00000276974 CHIC2Q9UKJ5 165 aa23.89■■□□□ 1.41
CNTNAP3B-201ENST00000276974 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
CNTNAP3B-201ENST00000276974 TONSLQ96HA7 1378 aa23.88■■□□□ 1.41
CNTNAP3B-201ENST00000276974 MAP3K1Q13233 1512 aa23.87■■□□□ 1.41
CNTNAP3B-201ENST00000276974 TDRD9Q8NDG6 1382 aaKnown RBP23.86■■□□□ 1.41
CNTNAP3B-201ENST00000276974 RRP7BPQ9NSQ0 103 aa23.84■■□□□ 1.41
CNTNAP3B-201ENST00000276974 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
CNTNAP3B-201ENST00000276974 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
CNTNAP3B-201ENST00000276974 PRDM2Q13029 1718 aa23.8■■□□□ 1.4
CNTNAP3B-201ENST00000276974 NEFLP07196 543 aa23.79■■□□□ 1.4
CNTNAP3B-201ENST00000276974 PTPRKQ15262 1439 aa23.79■■□□□ 1.4
CNTNAP3B-201ENST00000276974 FGD6Q6ZV73 1430 aa23.77■■□□□ 1.4
CNTNAP3B-201ENST00000276974 CASKIN1Q8WXD9 1431 aa23.77■■□□□ 1.4
CNTNAP3B-201ENST00000276974 TOPBP1Q92547 1522 aa23.77■■□□□ 1.4
CNTNAP3B-201ENST00000276974 CFAP43Q8NDM7 1665 aa23.76■■□□□ 1.39
CNTNAP3B-201ENST00000276974 IRX6P78412 446 aaPredicted RBP23.75■■□□□ 1.39
CNTNAP3B-201ENST00000276974 FYCO1Q9BQS8 1478 aa23.75■■□□□ 1.39
CNTNAP3B-201ENST00000276974 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
CNTNAP3B-201ENST00000276974 CCDC18Q5T9S5 1454 aa23.74■■□□□ 1.39
CNTNAP3B-201ENST00000276974 TIMELESSQ9UNS1 1208 aa23.71■■□□□ 1.39
CNTNAP3B-201ENST00000276974 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
CNTNAP3B-201ENST00000276974 FOXD1Q16676 465 aa23.7■■□□□ 1.38
CNTNAP3B-201ENST00000276974 FMN1Q68DA7 1419 aa23.68■■□□□ 1.38
CNTNAP3B-201ENST00000276974 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
CNTNAP3B-201ENST00000276974 HNRNPUQ00839 825 aaKnown RBP eCLIP23.67■■□□□ 1.38
CNTNAP3B-201ENST00000276974 AQRO60306 1485 aaKnown RBP eCLIP23.67■■□□□ 1.38
CNTNAP3B-201ENST00000276974 CNGB1Q14028 1251 aaPredicted RBP23.67■■□□□ 1.38
CNTNAP3B-201ENST00000276974 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
CNTNAP3B-201ENST00000276974 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
CNTNAP3B-201ENST00000276974 EFCAB5A4FU69 1503 aa23.62■■□□□ 1.37
CNTNAP3B-201ENST00000276974 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
CNTNAP3B-201ENST00000276974 NAIPQ13075 1403 aa23.6■■□□□ 1.37
CNTNAP3B-201ENST00000276974 UACAQ9BZF9 1416 aa23.6■■□□□ 1.37
CNTNAP3B-201ENST00000276974 HSPA5P11021 654 aaKnown RBP23.59■■□□□ 1.37
CNTNAP3B-201ENST00000276974 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
CNTNAP3B-201ENST00000276974 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
CNTNAP3B-201ENST00000276974 MYOM3Q5VTT5 1437 aa23.56■■□□□ 1.36
CNTNAP3B-201ENST00000276974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.56■■□□□ 1.36
CNTNAP3B-201ENST00000276974 ANP32EQ9BTT0 268 aa23.55■■□□□ 1.36
CNTNAP3B-201ENST00000276974 RBM19Q9Y4C8 960 aaKnown RBP23.55■■□□□ 1.36
CNTNAP3B-201ENST00000276974 PTPN23Q9H3S7 1636 aa23.54■■□□□ 1.36
CNTNAP3B-201ENST00000276974 CTTNBP2Q8WZ74 1663 aa23.54■■□□□ 1.36
CNTNAP3B-201ENST00000276974 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
CNTNAP3B-201ENST00000276974 WASHC2AQ641Q2 1341 aa23.53■■□□□ 1.36
CNTNAP3B-201ENST00000276974 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
CNTNAP3B-201ENST00000276974 CUL7Q14999 1698 aa23.5■■□□□ 1.35
CNTNAP3B-201ENST00000276974 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
CNTNAP3B-201ENST00000276974 SENP3-EIF4A1A0A087X0R7 540 aa23.48■■□□□ 1.35
CNTNAP3B-201ENST00000276974 L3MBTL2Q969R5 705 aa23.48■■□□□ 1.35
CNTNAP3B-201ENST00000276974 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
CNTNAP3B-201ENST00000276974 C11orf95C9JLR9 678 aaPredicted RBP23.46■■□□□ 1.35
CNTNAP3B-201ENST00000276974 MPHOSPH9Q99550 1183 aa23.46■■□□□ 1.35
CNTNAP3B-201ENST00000276974 POLR3GLQ9BT43 218 aa23.46■■□□□ 1.35
CNTNAP3B-201ENST00000276974 GRIN2BQ13224 1484 aa23.45■■□□□ 1.35
CNTNAP3B-201ENST00000276974 EIF4G2P78344 907 aaKnown RBP eCLIP23.45■■□□□ 1.34
CNTNAP3B-201ENST00000276974 MAGI3Q5TCQ9 1506 aa23.45■■□□□ 1.34
CNTNAP3B-201ENST00000276974 ZNF644Q9H582 1327 aaPredicted RBP23.41■■□□□ 1.34
CNTNAP3B-201ENST00000276974 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
CNTNAP3B-201ENST00000276974 CDK13Q14004 1512 aaKnown RBP23.39■■□□□ 1.33
CNTNAP3B-201ENST00000276974 SUPT6HQ7KZ85 1726 aaKnown RBP23.38■■□□□ 1.33
CNTNAP3B-201ENST00000276974 KDM6BO15054 1643 aa23.38■■□□□ 1.33
CNTNAP3B-201ENST00000276974 KDM5BQ9UGL1 1544 aa23.37■■□□□ 1.33
CNTNAP3B-201ENST00000276974 SAMD9Q5K651 1589 aa23.36■■□□□ 1.33
CNTNAP3B-201ENST00000276974 NBPF8Q3BBV2 869 aa23.35■■□□□ 1.33
CNTNAP3B-201ENST00000276974 MRS2Q9HD23 443 aa23.35■■□□□ 1.33
CNTNAP3B-201ENST00000276974 DENND4BO75064 1496 aaPredicted RBP23.35■■□□□ 1.33
CNTNAP3B-201ENST00000276974 EHBP1L1Q8N3D4 1523 aa23.35■■□□□ 1.33
CNTNAP3B-201ENST00000276974 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.33
CNTNAP3B-201ENST00000276974 SLC4A1APQ9BWU0 796 aaKnown RBP23.32■■□□□ 1.32
CNTNAP3B-201ENST00000276974 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
CNTNAP3B-201ENST00000276974 ZNF777Q9ULD5 760 aaPredicted RBP23.31■■□□□ 1.32
CNTNAP3B-201ENST00000276974 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
CNTNAP3B-201ENST00000276974 LAMC3Q9Y6N6 1575 aa23.29■■□□□ 1.32
CNTNAP3B-201ENST00000276974 EPRSP07814 1512 aaKnown RBP23.27■■□□□ 1.32
CNTNAP3B-201ENST00000276974 PRKRIP1Q9H875 184 aaPredicted RBP23.27■■□□□ 1.32
CNTNAP3B-201ENST00000276974 CDK11AQ9UQ88 783 aaPredicted RBP23.26■■□□□ 1.31
CNTNAP3B-201ENST00000276974 MSH5O43196 834 aa23.26■■□□□ 1.31
CNTNAP3B-201ENST00000276974 B4GALNT3Q6L9W6 998 aa23.25■■□□□ 1.31
CNTNAP3B-201ENST00000276974 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms