RNA–Protein interactions for RNA: ENST00000276974.7

CNTNAP3B-201, Transcript of contactin associated protein like 3B, humanhuman

TSL 5 BASIC

Gene CNTNAP3B, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-201ENST00000276974 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
CNTNAP3B-201ENST00000276974 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
CNTNAP3B-201ENST00000276974 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
CNTNAP3B-201ENST00000276974 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
CNTNAP3B-201ENST00000276974 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
CNTNAP3B-201ENST00000276974 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
CNTNAP3B-201ENST00000276974 MYO15BQ96JP2 1530 aa28.31■■■□□ 2.12
CNTNAP3B-201ENST00000276974 CCDC180Q9P1Z9 1646 aa28.27■■■□□ 2.12
CNTNAP3B-201ENST00000276974 PCGF6Q9BYE7 350 aa28.04■■■□□ 2.08
CNTNAP3B-201ENST00000276974 HRCP23327 699 aa27.9■■■□□ 2.06
CNTNAP3B-201ENST00000276974 LOC105371045A0A1W2PR82 267 aa27.86■■■□□ 2.05
CNTNAP3B-201ENST00000276974 PPARGC1BQ86YN6 1023 aaKnown RBP27.71■■■□□ 2.03
CNTNAP3B-201ENST00000276974 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
CNTNAP3B-201ENST00000276974 EHMT2Q96KQ7 1210 aa27.37■■□□□ 1.97
CNTNAP3B-201ENST00000276974 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
CNTNAP3B-201ENST00000276974 SCRIBQ14160 1630 aa27.15■■□□□ 1.94
CNTNAP3B-201ENST00000276974 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
CNTNAP3B-201ENST00000276974 TRIM26Q12899 539 aaPredicted RBP27.09■■□□□ 1.93
CNTNAP3B-201ENST00000276974 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
CNTNAP3B-201ENST00000276974 ABCC9O60706 1549 aa27■■□□□ 1.91
CNTNAP3B-201ENST00000276974 RB1CC1Q8TDY2 1594 aa26.83■■□□□ 1.89
CNTNAP3B-201ENST00000276974 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
CNTNAP3B-201ENST00000276974 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
CNTNAP3B-201ENST00000276974 TTBK1Q5TCY1 1321 aaPredicted RBP26.49■■□□□ 1.83
CNTNAP3B-201ENST00000276974 ZEB1P37275 1124 aaPredicted RBP26.43■■□□□ 1.82
CNTNAP3B-201ENST00000276974 WIZO95785 1651 aa26.37■■□□□ 1.81
CNTNAP3B-201ENST00000276974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
CNTNAP3B-201ENST00000276974 NACADO15069 1562 aa26.25■■□□□ 1.79
CNTNAP3B-201ENST00000276974 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
CNTNAP3B-201ENST00000276974 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
CNTNAP3B-201ENST00000276974 SCAF1Q9H7N4 1312 aaKnown RBP26.03■■□□□ 1.76
CNTNAP3B-201ENST00000276974 CCDC88BA6NC98 1476 aa25.96■■□□□ 1.75
CNTNAP3B-201ENST00000276974 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.75
CNTNAP3B-201ENST00000276974 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
CNTNAP3B-201ENST00000276974 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
CNTNAP3B-201ENST00000276974 SOGA1O94964 1423 aa25.88■■□□□ 1.73
CNTNAP3B-201ENST00000276974 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
CNTNAP3B-201ENST00000276974 RUSC2Q8N2Y8 1516 aa25.77■■□□□ 1.72
CNTNAP3B-201ENST00000276974 CEP162Q5TB80 1403 aa25.77■■□□□ 1.72
CNTNAP3B-201ENST00000276974 RANGAP1P46060 587 aaPredicted RBP25.75■■□□□ 1.71
CNTNAP3B-201ENST00000276974 CSRNP3Q8WYN3 585 aa25.73■■□□□ 1.71
CNTNAP3B-201ENST00000276974 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
CNTNAP3B-201ENST00000276974 DIEXFQ68CQ4 756 aaKnown RBP25.7■■□□□ 1.7
CNTNAP3B-201ENST00000276974 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
CNTNAP3B-201ENST00000276974 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
CNTNAP3B-201ENST00000276974 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
CNTNAP3B-201ENST00000276974 HNRNPUL2Q1KMD3 747 aaKnown RBP25.61■■□□□ 1.69
CNTNAP3B-201ENST00000276974 ACIN1Q9UKV3 1341 aaKnown RBP25.57■■□□□ 1.68
CNTNAP3B-201ENST00000276974 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
CNTNAP3B-201ENST00000276974 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
CNTNAP3B-201ENST00000276974 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
CNTNAP3B-201ENST00000276974 YTHDC1Q96MU7 727 aaKnown RBP25.48■■□□□ 1.67
CNTNAP3B-201ENST00000276974 GTF3C3Q9Y5Q9 886 aa25.46■■□□□ 1.67
CNTNAP3B-201ENST00000276974 GOLGA3Q08378 1498 aa25.37■■□□□ 1.65
CNTNAP3B-201ENST00000276974 CENPBP07199 599 aaPredicted RBP25.36■■□□□ 1.65
CNTNAP3B-201ENST00000276974 ZNF316A6NFI3 1004 aaPredicted RBP25.33■■□□□ 1.65
CNTNAP3B-201ENST00000276974 PELP1Q8IZL8 1130 aaKnown RBP25.33■■□□□ 1.65
CNTNAP3B-201ENST00000276974 EEA1Q15075 1411 aa25.32■■□□□ 1.64
CNTNAP3B-201ENST00000276974 APLP2Q06481 763 aa25.3■■□□□ 1.64
CNTNAP3B-201ENST00000276974 CLIP1P30622 1438 aa25.25■■□□□ 1.63
CNTNAP3B-201ENST00000276974 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
CNTNAP3B-201ENST00000276974 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
CNTNAP3B-201ENST00000276974 MIER1Q8N108 512 aa25.19■■□□□ 1.62
CNTNAP3B-201ENST00000276974 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
CNTNAP3B-201ENST00000276974 RAPGEF2Q9Y4G8 1499 aa25.15■■□□□ 1.62
CNTNAP3B-201ENST00000276974 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
CNTNAP3B-201ENST00000276974 ATAD2BQ9ULI0 1458 aa25.08■■□□□ 1.6
CNTNAP3B-201ENST00000276974 VPS8Q8N3P4 1428 aa25.04■■□□□ 1.6
CNTNAP3B-201ENST00000276974 ITGAEP38570 1179 aa24.97■■□□□ 1.59
CNTNAP3B-201ENST00000276974 KIF21BO75037 1637 aa24.96■■□□□ 1.59
CNTNAP3B-201ENST00000276974 KANK4Q5T7N3 995 aaPredicted RBP24.95■■□□□ 1.58
CNTNAP3B-201ENST00000276974 PEG3Q9GZU2 1588 aa24.92■■□□□ 1.58
CNTNAP3B-201ENST00000276974 TOP2BQ02880 1626 aa24.72■■□□□ 1.55
CNTNAP3B-201ENST00000276974 DHX57Q6P158 1386 aaKnown RBP24.72■■□□□ 1.55
CNTNAP3B-201ENST00000276974 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
CNTNAP3B-201ENST00000276974 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
CNTNAP3B-201ENST00000276974 ATP1B4Q9UN42 357 aaPredicted RBP24.63■■□□□ 1.53
CNTNAP3B-201ENST00000276974 CUX1P39880 1505 aa24.6■■□□□ 1.53
CNTNAP3B-201ENST00000276974 P3H3Q8IVL6 736 aa24.59■■□□□ 1.53
CNTNAP3B-201ENST00000276974 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
CNTNAP3B-201ENST00000276974 BIVM-ERCC5R4GMW8 1640 aa24.51■■□□□ 1.51
CNTNAP3B-201ENST00000276974 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
CNTNAP3B-201ENST00000276974 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
CNTNAP3B-201ENST00000276974 KCNH8Q96L42 1107 aa24.48■■□□□ 1.51
CNTNAP3B-201ENST00000276974 FAM50AQ14320 339 aaKnown RBP24.48■■□□□ 1.51
CNTNAP3B-201ENST00000276974 ARHGAP35Q9NRY4 1499 aa24.47■■□□□ 1.51
CNTNAP3B-201ENST00000276974 CLSPNQ9HAW4 1339 aa24.44■■□□□ 1.5
CNTNAP3B-201ENST00000276974 CUX2O14529 1486 aa24.42■■□□□ 1.5
CNTNAP3B-201ENST00000276974 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
CNTNAP3B-201ENST00000276974 RRBP1Q9P2E9 1410 aaKnown RBP24.41■■□□□ 1.5
CNTNAP3B-201ENST00000276974 SIN3AQ96ST3 1273 aa24.4■■□□□ 1.5
CNTNAP3B-201ENST00000276974 HIRIP3Q9BW71 556 aaPredicted RBP24.4■■□□□ 1.5
CNTNAP3B-201ENST00000276974 RAB3GAP2Q9H2M9 1393 aa24.39■■□□□ 1.49
CNTNAP3B-201ENST00000276974 IGF1RP08069 1367 aa24.35■■□□□ 1.49
CNTNAP3B-201ENST00000276974 SUPT16HQ9Y5B9 1047 aaKnown RBP24.35■■□□□ 1.49
CNTNAP3B-201ENST00000276974 CFTRP13569 1480 aa24.35■■□□□ 1.49
CNTNAP3B-201ENST00000276974 DDX10Q13206 875 aaKnown RBP24.31■■□□□ 1.48
CNTNAP3B-201ENST00000276974 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
CNTNAP3B-201ENST00000276974 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
CNTNAP3B-201ENST00000276974 BCANQ96GW7 911 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms