RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
RPS3A-201ENST00000274065 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
RPS3A-201ENST00000274065 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
RPS3A-201ENST00000274065 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
RPS3A-201ENST00000274065 RAD54L2Q9Y4B4 1467 aa15.86■□□□□ 0.13
RPS3A-201ENST00000274065 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
RPS3A-201ENST00000274065 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
RPS3A-201ENST00000274065 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
RPS3A-201ENST00000274065 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
RPS3A-201ENST00000274065 SOGA1O94964 1423 aa15.8■□□□□ 0.12
RPS3A-201ENST00000274065 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
RPS3A-201ENST00000274065 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
RPS3A-201ENST00000274065 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
RPS3A-201ENST00000274065 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
RPS3A-201ENST00000274065 SYNJ2O15056 1496 aa15.71■□□□□ 0.1
RPS3A-201ENST00000274065 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.1
RPS3A-201ENST00000274065 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
RPS3A-201ENST00000274065 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
RPS3A-201ENST00000274065 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
RPS3A-201ENST00000274065 ABCB7O75027 752 aa15.66■□□□□ 0.1
RPS3A-201ENST00000274065 CUX1P39880 1505 aa15.63■□□□□ 0.09
RPS3A-201ENST00000274065 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
RPS3A-201ENST00000274065 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
RPS3A-201ENST00000274065 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
RPS3A-201ENST00000274065 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
RPS3A-201ENST00000274065 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
RPS3A-201ENST00000274065 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
RPS3A-201ENST00000274065 NUP160Q12769 1436 aa15.49■□□□□ 0.07
RPS3A-201ENST00000274065 ZBTB22O15209 634 aa15.48■□□□□ 0.07
RPS3A-201ENST00000274065 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
RPS3A-201ENST00000274065 ILDR1Q86SU0 546 aaPredicted RBP15.45■□□□□ 0.06
RPS3A-201ENST00000274065 KDM4FA0A1W2PPD8 638 aa15.43■□□□□ 0.06
RPS3A-201ENST00000274065 POLA2Q14181 598 aa15.42■□□□□ 0.06
RPS3A-201ENST00000274065 SHROOM2Q13796 1616 aa15.42■□□□□ 0.06
RPS3A-201ENST00000274065 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
RPS3A-201ENST00000274065 FAM69CQ0P6D2 419 aa15.41■□□□□ 0.06
RPS3A-201ENST00000274065 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
RPS3A-201ENST00000274065 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
RPS3A-201ENST00000274065 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
RPS3A-201ENST00000274065 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
RPS3A-201ENST00000274065 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
RPS3A-201ENST00000274065 JPH4Q96JJ6 628 aa15.33■□□□□ 0.04
RPS3A-201ENST00000274065 DIP2BQ9P265 1576 aa15.31■□□□□ 0.04
RPS3A-201ENST00000274065 NPM1P06748 294 aaKnown RBP eCLIP15.3■□□□□ 0.04
RPS3A-201ENST00000274065 MAPKBP1O60336 1514 aa15.29■□□□□ 0.04
RPS3A-201ENST00000274065 KDM6BO15054 1643 aa15.28■□□□□ 0.04
RPS3A-201ENST00000274065 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.03
RPS3A-201ENST00000274065 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
RPS3A-201ENST00000274065 ATXN8OSP0DMR3 200 aa15.25■□□□□ 0.03
RPS3A-201ENST00000274065 ADCY10Q96PN6 1610 aa15.25■□□□□ 0.03
RPS3A-201ENST00000274065 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
RPS3A-201ENST00000274065 TOP2BQ02880 1626 aa15.21■□□□□ 0.02
RPS3A-201ENST00000274065 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
RPS3A-201ENST00000274065 TSPOAP1O95153 1857 aa15.18■□□□□ 0.02
RPS3A-201ENST00000274065 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
RPS3A-201ENST00000274065 ADGRL1O94910 1474 aa15.14■□□□□ 0.01
RPS3A-201ENST00000274065 POTEHQ6S545 545 aa15.13■□□□□ 0.01
RPS3A-201ENST00000274065 KIAA0586Q9BVV6 1533 aa15.1■□□□□ 0.01
RPS3A-201ENST00000274065 HECW2Q9P2P5 1572 aa15.09■□□□□ 0.01
RPS3A-201ENST00000274065 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0
RPS3A-201ENST00000274065 COL17A1Q9UMD9 1497 aaPredicted RBP15.08■□□□□ 0
RPS3A-201ENST00000274065 PTPRGP23470 1445 aa15.07■□□□□ 0
RPS3A-201ENST00000274065 SUPT5HO00267 1087 aaKnown RBP15.06■□□□□ 0
RPS3A-201ENST00000274065 PPRC1Q5VV67 1664 aaKnown RBP15.06■□□□□ 0
RPS3A-201ENST00000274065 ASXL2Q76L83 1435 aa15.05■□□□□ -0
RPS3A-201ENST00000274065 ABCC2Q92887 1545 aa15.04■□□□□ -0
RPS3A-201ENST00000274065 GLI2P10070 1586 aa15.02■□□□□ -0
RPS3A-201ENST00000274065 IGF1RP08069 1367 aa15.02■□□□□ -0
RPS3A-201ENST00000274065 PLB1Q6P1J6 1458 aa15.01□□□□□ -0.01
RPS3A-201ENST00000274065 TNIKQ9UKE5 1360 aa14.98□□□□□ -0.01
RPS3A-201ENST00000274065 EPRSP07814 1512 aaKnown RBP14.95□□□□□ -0.02
RPS3A-201ENST00000274065 UHRF1BP1LA0JNW5 1464 aa14.95□□□□□ -0.02
RPS3A-201ENST00000274065 CARMIL2Q6F5E8 1435 aa14.94□□□□□ -0.02
RPS3A-201ENST00000274065 CUL7Q14999 1698 aa14.93□□□□□ -0.02
RPS3A-201ENST00000274065 FBXO41Q8TF61 875 aa14.93□□□□□ -0.02
RPS3A-201ENST00000274065 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
RPS3A-201ENST00000274065 UACAQ9BZF9 1416 aa14.92□□□□□ -0.02
RPS3A-201ENST00000274065 MAP3K4Q9Y6R4 1608 aa14.92□□□□□ -0.02
RPS3A-201ENST00000274065 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
RPS3A-201ENST00000274065 TEX14Q8IWB6 1497 aa14.91□□□□□ -0.02
RPS3A-201ENST00000274065 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
RPS3A-201ENST00000274065 KDM5BQ9UGL1 1544 aa14.89□□□□□ -0.03
RPS3A-201ENST00000274065 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
RPS3A-201ENST00000274065 DISP1Q96F81 1524 aa14.87□□□□□ -0.03
RPS3A-201ENST00000274065 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
RPS3A-201ENST00000274065 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
RPS3A-201ENST00000274065 ZCCHC11Q5TAX3 1644 aaKnown RBP14.83□□□□□ -0.04
RPS3A-201ENST00000274065 WDR7Q9Y4E6 1490 aa14.81□□□□□ -0.04
RPS3A-201ENST00000274065 CD109Q6YHK3 1445 aa14.78□□□□□ -0.04
RPS3A-201ENST00000274065 MAGI3Q5TCQ9 1506 aa14.77□□□□□ -0.04
RPS3A-201ENST00000274065 REM2Q8IYK8 340 aaPredicted RBP14.77□□□□□ -0.05
RPS3A-201ENST00000274065 UGGT2Q9NYU1 1516 aa14.76□□□□□ -0.05
RPS3A-201ENST00000274065 KCNH8Q96L42 1107 aa14.76□□□□□ -0.05
RPS3A-201ENST00000274065 KIF21BO75037 1637 aa14.76□□□□□ -0.05
RPS3A-201ENST00000274065 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
RPS3A-201ENST00000274065 PTPRMP28827 1452 aa14.72□□□□□ -0.05
RPS3A-201ENST00000274065 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
RPS3A-201ENST00000274065 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
RPS3A-201ENST00000274065 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
RPS3A-201ENST00000274065 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms