RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 PNNQ9H307 717 aaKnown RBP19.2■□□□□ 0.66
PRDM15-201ENST00000269844 ABCC9O60706 1549 aa19.2■□□□□ 0.66
PRDM15-201ENST00000269844 BECN1Q14457 450 aa19.18■□□□□ 0.66
PRDM15-201ENST00000269844 TIMELESSQ9UNS1 1208 aa19.18■□□□□ 0.66
PRDM15-201ENST00000269844 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
PRDM15-201ENST00000269844 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
PRDM15-201ENST00000269844 A0A0U1RQG5 324 aaPredicted RBP19.12■□□□□ 0.65
PRDM15-201ENST00000269844 ZNF326Q5BKZ1 582 aaKnown RBP19.12■□□□□ 0.65
PRDM15-201ENST00000269844 L1TD1Q5T7N2 865 aaKnown RBP19.12■□□□□ 0.65
PRDM15-201ENST00000269844 HIRIP3Q9BW71 556 aaPredicted RBP19.09■□□□□ 0.65
PRDM15-201ENST00000269844 DNTTIP2Q5QJE6 756 aaKnown RBP19.08■□□□□ 0.64
PRDM15-201ENST00000269844 FANCIQ9NVI1 1328 aa19.06■□□□□ 0.64
PRDM15-201ENST00000269844 IPO9Q96P70 1041 aaKnown RBP19.05■□□□□ 0.64
PRDM15-201ENST00000269844 TONSLQ96HA7 1378 aa19.05■□□□□ 0.64
PRDM15-201ENST00000269844 GOLGA6L2Q8N9W4 650 aaPredicted RBP19■□□□□ 0.63
PRDM15-201ENST00000269844 ARID3AQ99856 593 aa19■□□□□ 0.63
PRDM15-201ENST00000269844 TMC1Q8TDI8 760 aa19■□□□□ 0.63
PRDM15-201ENST00000269844 FBLN2P98095 1184 aa18.99■□□□□ 0.63
PRDM15-201ENST00000269844 PTMAP06454 111 aaKnown RBP18.99■□□□□ 0.63
PRDM15-201ENST00000269844 USP35Q9P2H5 1018 aa18.97■□□□□ 0.63
PRDM15-201ENST00000269844 GOLGA6L22H0YM25 854 aa18.96■□□□□ 0.63
PRDM15-201ENST00000269844 MSNP26038 577 aaKnown RBP18.94■□□□□ 0.62
PRDM15-201ENST00000269844 UBE2Q2Q8WVN8 375 aa18.94■□□□□ 0.62
PRDM15-201ENST00000269844 IL27Q8NEV9 243 aa18.93■□□□□ 0.62
PRDM15-201ENST00000269844 GSE1Q14687 1217 aa18.89■□□□□ 0.62
PRDM15-201ENST00000269844 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
PRDM15-201ENST00000269844 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
PRDM15-201ENST00000269844 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
PRDM15-201ENST00000269844 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
PRDM15-201ENST00000269844 RGS3P49796 1198 aa18.79■□□□□ 0.6
PRDM15-201ENST00000269844 GOLGA6L3A6NEY3 463 aa18.77■□□□□ 0.6
PRDM15-201ENST00000269844 GZF1Q9H116 711 aaPredicted RBP18.77■□□□□ 0.6
PRDM15-201ENST00000269844 TNNT3P45378 269 aaPredicted RBP18.76■□□□□ 0.59
PRDM15-201ENST00000269844 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
PRDM15-201ENST00000269844 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
PRDM15-201ENST00000269844 CHAF1AQ13111 956 aaPredicted RBP18.7■□□□□ 0.58
PRDM15-201ENST00000269844 BRPF3Q9ULD4 1205 aa18.69■□□□□ 0.58
PRDM15-201ENST00000269844 EIF4G2P78344 907 aaKnown RBP eCLIP18.69■□□□□ 0.586e-7■■■■■ 40.3
PRDM15-201ENST00000269844 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
PRDM15-201ENST00000269844 SLKQ9H2G2 1235 aaPredicted RBP18.66■□□□□ 0.58
PRDM15-201ENST00000269844 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
PRDM15-201ENST00000269844 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
PRDM15-201ENST00000269844 ZBTB7CA1YPR0 619 aa18.64■□□□□ 0.57
PRDM15-201ENST00000269844 SPRYD3Q8NCJ5 442 aa18.63■□□□□ 0.57
PRDM15-201ENST00000269844 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
PRDM15-201ENST00000269844 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
PRDM15-201ENST00000269844 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
PRDM15-201ENST00000269844 WDR43Q15061 677 aaKnown RBP eCLIP18.6■□□□□ 0.57
PRDM15-201ENST00000269844 FAM13BQ9NYF5 915 aa18.58■□□□□ 0.56
PRDM15-201ENST00000269844 HSP90AB1P08238 724 aaKnown RBP18.57■□□□□ 0.56
PRDM15-201ENST00000269844 ARID3CA6NKF2 412 aa18.55■□□□□ 0.56
PRDM15-201ENST00000269844 FAM43AQ8N2R8 423 aa18.54■□□□□ 0.56
PRDM15-201ENST00000269844 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
PRDM15-201ENST00000269844 HSCBQ8IWL3 235 aa18.54■□□□□ 0.56
PRDM15-201ENST00000269844 ZMYND15Q9H091 742 aa18.54■□□□□ 0.56
PRDM15-201ENST00000269844 CHGAP10645 457 aaKnown RBP18.53■□□□□ 0.56
PRDM15-201ENST00000269844 SLC4A3P48751 1232 aa18.53■□□□□ 0.56
PRDM15-201ENST00000269844 MSH5O43196 834 aa18.52■□□□□ 0.56
PRDM15-201ENST00000269844 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
PRDM15-201ENST00000269844 TPRNQ4KMQ1 711 aa18.51■□□□□ 0.55
PRDM15-201ENST00000269844 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
PRDM15-201ENST00000269844 RRP9O43818 475 aaKnown RBP18.51■□□□□ 0.55
PRDM15-201ENST00000269844 PAK3O75914 559 aaPredicted RBP18.5■□□□□ 0.55
PRDM15-201ENST00000269844 PDE4AP27815 886 aa18.5■□□□□ 0.55
PRDM15-201ENST00000269844 FRAT1Q92837 279 aaPredicted RBP18.49■□□□□ 0.55
PRDM15-201ENST00000269844 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
PRDM15-201ENST00000269844 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
PRDM15-201ENST00000269844 PDE4CQ08493 712 aa18.48■□□□□ 0.55
PRDM15-201ENST00000269844 ZNF771Q7L3S4 317 aaPredicted RBP18.46■□□□□ 0.55
PRDM15-201ENST00000269844 NFKBIBQ15653 356 aa18.45■□□□□ 0.54
PRDM15-201ENST00000269844 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
PRDM15-201ENST00000269844 PTMSP20962 102 aa18.43■□□□□ 0.54
PRDM15-201ENST00000269844 MAP7D2Q96T17 732 aa18.43■□□□□ 0.54
PRDM15-201ENST00000269844 CLIP1P30622 1438 aa18.38■□□□□ 0.53
PRDM15-201ENST00000269844 TPM2P07951 284 aa18.38■□□□□ 0.53
PRDM15-201ENST00000269844 APPP05067 770 aa18.38■□□□□ 0.53
PRDM15-201ENST00000269844 PLPPR3Q6T4P5 718 aa18.37■□□□□ 0.53
PRDM15-201ENST00000269844 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.37■□□□□ 0.53
PRDM15-201ENST00000269844 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
PRDM15-201ENST00000269844 EEA1Q15075 1411 aa18.35■□□□□ 0.53
PRDM15-201ENST00000269844 RCAN3Q9UKA8 241 aa18.35■□□□□ 0.53
PRDM15-201ENST00000269844 MTERF4Q7Z6M4 381 aaKnown RBP18.34■□□□□ 0.53
PRDM15-201ENST00000269844 DDX11L8A8MPP1 907 aa18.3■□□□□ 0.52
PRDM15-201ENST00000269844 DRC7Q8IY82 874 aa18.3■□□□□ 0.52
PRDM15-201ENST00000269844 GOLGA6L6A8MZA4 724 aa18.29■□□□□ 0.52
PRDM15-201ENST00000269844 TSPY4P0CV99 314 aa18.29■□□□□ 0.52
PRDM15-201ENST00000269844 TSPY10P0CW01 314 aa18.29■□□□□ 0.52
PRDM15-201ENST00000269844 ZRSR1Q15695 479 aaKnown RBP18.29■□□□□ 0.52
PRDM15-201ENST00000269844 PLEKHG5O94827 1062 aa18.29■□□□□ 0.52
PRDM15-201ENST00000269844 RBM10P98175 930 aaKnown RBP18.29■□□□□ 0.52
PRDM15-201ENST00000269844 NRDCO43847 1150 aa18.28■□□□□ 0.52
PRDM15-201ENST00000269844 CHIC2Q9UKJ5 165 aa18.28■□□□□ 0.52
PRDM15-201ENST00000269844 MS4A1P11836 297 aa18.27■□□□□ 0.51
PRDM15-201ENST00000269844 CALD1Q05682 793 aaKnown RBP18.27■□□□□ 0.51
PRDM15-201ENST00000269844 FTSJ3Q8IY81 847 aaKnown RBP18.27■□□□□ 0.51
PRDM15-201ENST00000269844 R3HCC1Q9Y3T6 440 aaKnown RBP18.27■□□□□ 0.51
PRDM15-201ENST00000269844 CASC1Q6TDU7 716 aa18.24■□□□□ 0.51
PRDM15-201ENST00000269844 FAM161AQ3B820 660 aa18.24■□□□□ 0.51
PRDM15-201ENST00000269844 CSPP1Q1MSJ5 1256 aa18.24■□□□□ 0.51
PRDM15-201ENST00000269844 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms