RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 URB2Q14146 1524 aaKnown RBP28.16■■■□□ 2.1
CPNE7-201ENST00000268720 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.09
CPNE7-201ENST00000268720 CCNB3Q8WWL7 1395 aa28.14■■■□□ 2.09
CPNE7-201ENST00000268720 DHX57Q6P158 1386 aaKnown RBP28.12■■■□□ 2.09
CPNE7-201ENST00000268720 TIAM1Q13009 1591 aa28.11■■■□□ 2.09
CPNE7-201ENST00000268720 ATP1B4Q9UN42 357 aaPredicted RBP28.08■■■□□ 2.09
CPNE7-201ENST00000268720 TDRD9Q8NDG6 1382 aaKnown RBP28.07■■■□□ 2.08
CPNE7-201ENST00000268720 FHOD3Q2V2M9 1422 aa28.05■■■□□ 2.08
CPNE7-201ENST00000268720 LRRC9Q6ZRR7 1453 aa28.02■■■□□ 2.08
CPNE7-201ENST00000268720 MAP3K1Q13233 1512 aa28.01■■■□□ 2.07
CPNE7-201ENST00000268720 FHAD1B1AJZ9 1412 aa28.01■■■□□ 2.07
CPNE7-201ENST00000268720 PCF11O94913 1555 aaKnown RBP28■■■□□ 2.07
CPNE7-201ENST00000268720 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
CPNE7-201ENST00000268720 CUL7Q14999 1698 aa27.98■■■□□ 2.07
CPNE7-201ENST00000268720 PHLDB1Q86UU1 1377 aa27.98■■■□□ 2.07
CPNE7-201ENST00000268720 WDR97A6NE52 1622 aa27.97■■■□□ 2.07
CPNE7-201ENST00000268720 CLSPNQ9HAW4 1339 aa27.95■■■□□ 2.07
CPNE7-201ENST00000268720 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
CPNE7-201ENST00000268720 GAPVD1Q14C86 1478 aa27.91■■■□□ 2.06
CPNE7-201ENST00000268720 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
CPNE7-201ENST00000268720 CTTNBP2Q8WZ74 1663 aa27.89■■■□□ 2.06
CPNE7-201ENST00000268720 EFCAB5A4FU69 1503 aa27.87■■■□□ 2.05
CPNE7-201ENST00000268720 CFAP43Q8NDM7 1665 aa27.87■■■□□ 2.05
CPNE7-201ENST00000268720 FAM50AQ14320 339 aaKnown RBP27.86■■■□□ 2.05
CPNE7-201ENST00000268720 RAB3GAP2Q9H2M9 1393 aa27.86■■■□□ 2.05
CPNE7-201ENST00000268720 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.05
CPNE7-201ENST00000268720 CASKIN1Q8WXD9 1431 aa27.83■■■□□ 2.05
CPNE7-201ENST00000268720 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.037e-8■■■■□ 24
CPNE7-201ENST00000268720 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
CPNE7-201ENST00000268720 FMN1Q68DA7 1419 aa27.75■■■□□ 2.03
CPNE7-201ENST00000268720 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
CPNE7-201ENST00000268720 SETD5Q9C0A6 1442 aa27.72■■■□□ 2.03
CPNE7-201ENST00000268720 HIRIP3Q9BW71 556 aaPredicted RBP27.72■■■□□ 2.03
CPNE7-201ENST00000268720 KCNH8Q96L42 1107 aa27.71■■■□□ 2.03
CPNE7-201ENST00000268720 SIN3AQ96ST3 1273 aa27.69■■■□□ 2.02
CPNE7-201ENST00000268720 SAMD9Q5K651 1589 aa27.68■■■□□ 2.02
CPNE7-201ENST00000268720 MAPKBP1O60336 1514 aa27.68■■■□□ 2.02
CPNE7-201ENST00000268720 MTUS2Q5JR59 1369 aa27.62■■■□□ 2.01
CPNE7-201ENST00000268720 LRRIQ1Q96JM4 1722 aa27.61■■■□□ 2.01
CPNE7-201ENST00000268720 GRIN2BQ13224 1484 aa27.57■■■□□ 2
CPNE7-201ENST00000268720 FGD6Q6ZV73 1430 aa27.57■■■□□ 2
CPNE7-201ENST00000268720 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
CPNE7-201ENST00000268720 PBRM1Q86U86 1689 aa27.55■■■□□ 2
CPNE7-201ENST00000268720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.52■■■□□ 21e-6■■■■□ 20
CPNE7-201ENST00000268720 ZNF608Q9ULD9 1512 aaPredicted RBP27.5■■□□□ 1.99
CPNE7-201ENST00000268720 NCOA2Q15596 1464 aa27.49■■□□□ 1.99
CPNE7-201ENST00000268720 PTPRKQ15262 1439 aa27.48■■□□□ 1.99
CPNE7-201ENST00000268720 ADAMTS12P58397 1594 aa27.47■■□□□ 1.99
CPNE7-201ENST00000268720 ARID3CA6NKF2 412 aa27.47■■□□□ 1.99
CPNE7-201ENST00000268720 MAGI3Q5TCQ9 1506 aa27.44■■□□□ 1.98
CPNE7-201ENST00000268720 DDX10Q13206 875 aaKnown RBP27.44■■□□□ 1.98
CPNE7-201ENST00000268720 IQGAP2Q13576 1575 aa27.43■■□□□ 1.98
CPNE7-201ENST00000268720 MYOM3Q5VTT5 1437 aa27.42■■□□□ 1.98
CPNE7-201ENST00000268720 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
CPNE7-201ENST00000268720 EHBP1L1Q8N3D4 1523 aa27.37■■□□□ 1.97
CPNE7-201ENST00000268720 SUPT6HQ7KZ85 1726 aaKnown RBP27.37■■□□□ 1.97
CPNE7-201ENST00000268720 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
CPNE7-201ENST00000268720 WDR62O43379 1518 aa27.35■■□□□ 1.97
CPNE7-201ENST00000268720 UGGT2Q9NYU1 1516 aa27.33■■□□□ 1.97
CPNE7-201ENST00000268720 CCDC18Q5T9S5 1454 aa27.33■■□□□ 1.97
CPNE7-201ENST00000268720 BCANQ96GW7 911 aa27.33■■□□□ 1.96
CPNE7-201ENST00000268720 HFM1A2PYH4 1435 aa27.32■■□□□ 1.96
CPNE7-201ENST00000268720 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
CPNE7-201ENST00000268720 CDK13Q14004 1512 aaKnown RBP27.31■■□□□ 1.96
CPNE7-201ENST00000268720 ARHGEF11O15085 1522 aa27.3■■□□□ 1.96
CPNE7-201ENST00000268720 HECW1Q76N89 1606 aa27.29■■□□□ 1.96
CPNE7-201ENST00000268720 NAIPQ13075 1403 aa27.29■■□□□ 1.96
CPNE7-201ENST00000268720 PTPN23Q9H3S7 1636 aa27.27■■□□□ 1.96
CPNE7-201ENST00000268720 SUPT16HQ9Y5B9 1047 aaKnown RBP27.27■■□□□ 1.96
CPNE7-201ENST00000268720 CHIC2Q9UKJ5 165 aa27.26■■□□□ 1.95
CPNE7-201ENST00000268720 RRP7BPQ9NSQ0 103 aa27.24■■□□□ 1.95
CPNE7-201ENST00000268720 UACAQ9BZF9 1416 aa27.23■■□□□ 1.95
CPNE7-201ENST00000268720 PPP1R15AO75807 674 aaPredicted RBP27.22■■□□□ 1.95
CPNE7-201ENST00000268720 EIF4G3O43432 1585 aaKnown RBP27.22■■□□□ 1.95
CPNE7-201ENST00000268720 ERCC6Q03468 1493 aa27.22■■□□□ 1.95
CPNE7-201ENST00000268720 KIAA0586Q9BVV6 1533 aa27.21■■□□□ 1.95
CPNE7-201ENST00000268720 TIMELESSQ9UNS1 1208 aa27.2■■□□□ 1.95
CPNE7-201ENST00000268720 DISP1Q96F81 1524 aa27.2■■□□□ 1.95
CPNE7-201ENST00000268720 GRIN2AQ12879 1464 aa27.18■■□□□ 1.94
CPNE7-201ENST00000268720 TRIM52Q96A61 297 aa27.15■■□□□ 1.94
CPNE7-201ENST00000268720 TCOF1Q13428 1488 aaKnown RBP27.15■■□□□ 1.94
CPNE7-201ENST00000268720 KIAA0556O60303 1618 aa27.15■■□□□ 1.94
CPNE7-201ENST00000268720 FBLN2P98095 1184 aa27.12■■□□□ 1.93
CPNE7-201ENST00000268720 TONSLQ96HA7 1378 aa27.11■■□□□ 1.93
CPNE7-201ENST00000268720 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
CPNE7-201ENST00000268720 NUP153P49790 1475 aaKnown RBP27.09■■□□□ 1.93
CPNE7-201ENST00000268720 MIA2Q96PC5 1412 aa27.06■■□□□ 1.92
CPNE7-201ENST00000268720 KDM6BO15054 1643 aa27.06■■□□□ 1.92
CPNE7-201ENST00000268720 ZNF644Q9H582 1327 aaPredicted RBP27.04■■□□□ 1.92
CPNE7-201ENST00000268720 FOXD1Q16676 465 aa27.03■■□□□ 1.92
CPNE7-201ENST00000268720 DENND4BO75064 1496 aaPredicted RBP27.02■■□□□ 1.92
CPNE7-201ENST00000268720 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
CPNE7-201ENST00000268720 MAGI1Q96QZ7 1491 aaPredicted RBP27.02■■□□□ 1.92
CPNE7-201ENST00000268720 RAPGEF6Q8TEU7 1601 aa27■■□□□ 1.91
CPNE7-201ENST00000268720 SYNJ2O15056 1496 aa26.99■■□□□ 1.91
CPNE7-201ENST00000268720 GCC2Q8IWJ2 1684 aa26.98■■□□□ 1.91
CPNE7-201ENST00000268720 PLB1Q6P1J6 1458 aa26.97■■□□□ 1.91
CPNE7-201ENST00000268720 FKBP8Q14318 412 aa26.96■■□□□ 1.91
CPNE7-201ENST00000268720 PRG4Q92954 1404 aaPredicted RBP26.95■■□□□ 1.91
CPNE7-201ENST00000268720 AKNAQ7Z591 1439 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms