RNA–Protein interactions for RNA: ENST00000264808.7

PRDM5-201, Transcript of PR/SET domain 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM5, Length 5,330 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-201ENST00000264808 GTF3C3Q9Y5Q9 886 aa25.12■■□□□ 1.61
PRDM5-201ENST00000264808 CLSPNQ9HAW4 1339 aa25.11■■□□□ 1.61
PRDM5-201ENST00000264808 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
PRDM5-201ENST00000264808 ARID4BQ4LE39 1312 aaPredicted RBP25.08■■□□□ 1.61
PRDM5-201ENST00000264808 SLC24A1O60721 1099 aa25.07■■□□□ 1.6
PRDM5-201ENST00000264808 PPP1R15AO75807 674 aaPredicted RBP25.05■■□□□ 1.6
PRDM5-201ENST00000264808 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
PRDM5-201ENST00000264808 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
PRDM5-201ENST00000264808 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
PRDM5-201ENST00000264808 CANXP27824 592 aaKnown RBP24.98■■□□□ 1.59
PRDM5-201ENST00000264808 RRP7BPQ9NSQ0 103 aa24.97■■□□□ 1.59
PRDM5-201ENST00000264808 TRHP20396 242 aaPredicted RBP24.92■■□□□ 1.58
PRDM5-201ENST00000264808 WIZO95785 1651 aa24.92■■□□□ 1.58
PRDM5-201ENST00000264808 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
PRDM5-201ENST00000264808 KDM2AQ9Y2K7 1162 aa24.87■■□□□ 1.57
PRDM5-201ENST00000264808 KANK1Q14678 1352 aa24.83■■□□□ 1.57
PRDM5-201ENST00000264808 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
PRDM5-201ENST00000264808 FMN1Q68DA7 1419 aa24.81■■□□□ 1.56
PRDM5-201ENST00000264808 C14orf37Q86TY3 774 aa24.79■■□□□ 1.56
PRDM5-201ENST00000264808 CDCA8Q53HL2 280 aa24.77■■□□□ 1.56
PRDM5-201ENST00000264808 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
PRDM5-201ENST00000264808 NCAPD3P42695 1498 aa24.74■■□□□ 1.55
PRDM5-201ENST00000264808 RAPGEF2Q9Y4G8 1499 aa24.72■■□□□ 1.55
PRDM5-201ENST00000264808 EIF4G2P78344 907 aaKnown RBP eCLIP24.72■■□□□ 1.55
PRDM5-201ENST00000264808 EFCAB2Q5VUJ9 269 aa24.68■■□□□ 1.54
PRDM5-201ENST00000264808 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
PRDM5-201ENST00000264808 WDR43Q15061 677 aaKnown RBP eCLIP24.65■■□□□ 1.54
PRDM5-201ENST00000264808 VPS8Q8N3P4 1428 aa24.63■■□□□ 1.53
PRDM5-201ENST00000264808 ARHGAP35Q9NRY4 1499 aa24.63■■□□□ 1.53
PRDM5-201ENST00000264808 TMC1Q8TDI8 760 aa24.62■■□□□ 1.53
PRDM5-201ENST00000264808 RGL3Q3MIN7 710 aa24.62■■□□□ 1.53
PRDM5-201ENST00000264808 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
PRDM5-201ENST00000264808 OSCARQ8IYS5 282 aa24.58■■□□□ 1.52
PRDM5-201ENST00000264808 DDX10Q13206 875 aaKnown RBP24.57■■□□□ 1.52
PRDM5-201ENST00000264808 RSPH4AQ5TD94 716 aa24.55■■□□□ 1.52
PRDM5-201ENST00000264808 HAP1P54257 671 aaPredicted RBP24.53■■□□□ 1.52
PRDM5-201ENST00000264808 POGKQ9P215 609 aa24.51■■□□□ 1.51
PRDM5-201ENST00000264808 RTL5Q5HYW3 569 aaPredicted RBP24.5■■□□□ 1.51
PRDM5-201ENST00000264808 NPM2Q86SE8 214 aaKnown RBP24.49■■□□□ 1.51
PRDM5-201ENST00000264808 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.49■■□□□ 1.51
PRDM5-201ENST00000264808 CFAP53Q96M91 514 aa24.48■■□□□ 1.51
PRDM5-201ENST00000264808 CCDC18Q5T9S5 1454 aa24.47■■□□□ 1.51
PRDM5-201ENST00000264808 CARD11Q9BXL7 1154 aa24.47■■□□□ 1.51
PRDM5-201ENST00000264808 MLECQ14165 292 aa24.45■■□□□ 1.51
PRDM5-201ENST00000264808 ANKRD30AQ9BXX3 1397 aa24.44■■□□□ 1.5
PRDM5-201ENST00000264808 FAM9BQ8IZU0 186 aa24.43■■□□□ 1.5
PRDM5-201ENST00000264808 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
PRDM5-201ENST00000264808 PTPRGP23470 1445 aa24.42■■□□□ 1.5
PRDM5-201ENST00000264808 HNRNPUQ00839 825 aaKnown RBP eCLIP24.41■■□□□ 1.5
PRDM5-201ENST00000264808 KNSTRNQ9Y448 316 aa24.4■■□□□ 1.5
PRDM5-201ENST00000264808 TIMELESSQ9UNS1 1208 aa24.4■■□□□ 1.5
PRDM5-201ENST00000264808 MRS2Q9HD23 443 aa24.4■■□□□ 1.5
PRDM5-201ENST00000264808 GGT6Q6P531 493 aa24.4■■□□□ 1.5
PRDM5-201ENST00000264808 ZBTB7CA1YPR0 619 aa24.39■■□□□ 1.5
PRDM5-201ENST00000264808 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.49
PRDM5-201ENST00000264808 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
PRDM5-201ENST00000264808 BCL11AQ9H165 835 aa24.34■■□□□ 1.49
PRDM5-201ENST00000264808 FHOD3Q2V2M9 1422 aa24.33■■□□□ 1.49
PRDM5-201ENST00000264808 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
PRDM5-201ENST00000264808 SETD5Q9C0A6 1442 aa24.33■■□□□ 1.48
PRDM5-201ENST00000264808 SPAG9O60271 1321 aaKnown RBP24.31■■□□□ 1.48
PRDM5-201ENST00000264808 A0A0G2JS52 829 aa24.3■■□□□ 1.48
PRDM5-201ENST00000264808 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
PRDM5-201ENST00000264808 MRC2Q9UBG0 1479 aa24.28■■□□□ 1.48
PRDM5-201ENST00000264808 NUDCQ9Y266 331 aa24.27■■□□□ 1.48
PRDM5-201ENST00000264808 TMF1P82094 1093 aa24.25■■□□□ 1.47
PRDM5-201ENST00000264808 DCAF11Q8TEB1 546 aa24.24■■□□□ 1.47
PRDM5-201ENST00000264808 CFTRP13569 1480 aa24.23■■□□□ 1.47
PRDM5-201ENST00000264808 CYB5RLQ6IPT4 315 aa24.23■■□□□ 1.47
PRDM5-201ENST00000264808 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
PRDM5-201ENST00000264808 PKD2Q13563 968 aa24.21■■□□□ 1.47
PRDM5-201ENST00000264808 KIF3BO15066 747 aa24.2■■□□□ 1.46
PRDM5-201ENST00000264808 NUP155O75694 1391 aa24.2■■□□□ 1.46
PRDM5-201ENST00000264808 SALL2Q9Y467 1007 aaPredicted RBP24.2■■□□□ 1.46
PRDM5-201ENST00000264808 LMOD2Q6P5Q4 547 aa24.2■■□□□ 1.46
PRDM5-201ENST00000264808 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
PRDM5-201ENST00000264808 MYH16Q9H6N6 1097 aa24.19■■□□□ 1.46
PRDM5-201ENST00000264808 PNNQ9H307 717 aaKnown RBP24.19■■□□□ 1.46
PRDM5-201ENST00000264808 PLEKHG5O94827 1062 aa24.19■■□□□ 1.46
PRDM5-201ENST00000264808 KANK4Q5T7N3 995 aaPredicted RBP24.18■■□□□ 1.46
PRDM5-201ENST00000264808 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
PRDM5-201ENST00000264808 MIER1Q8N108 512 aa24.18■■□□□ 1.46
PRDM5-201ENST00000264808 IGF1RP08069 1367 aa24.17■■□□□ 1.46
PRDM5-201ENST00000264808 EID1Q9Y6B2 187 aa24.17■■□□□ 1.46
PRDM5-201ENST00000264808 UPF2Q9HAU5 1272 aaKnown RBP24.17■■□□□ 1.46
PRDM5-201ENST00000264808 FKBP8Q14318 412 aa24.15■■□□□ 1.46
PRDM5-201ENST00000264808 MAPK8IP3Q9UPT6 1336 aa24.14■■□□□ 1.46
PRDM5-201ENST00000264808 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.45
PRDM5-201ENST00000264808 WASHC2CQ9Y4E1 1318 aa24.13■■□□□ 1.45
PRDM5-201ENST00000264808 HIRIP3Q9BW71 556 aaPredicted RBP24.12■■□□□ 1.45
PRDM5-201ENST00000264808 PPM1GO15355 546 aaPredicted RBP24.11■■□□□ 1.45
PRDM5-201ENST00000264808 SIN3AQ96ST3 1273 aa24.11■■□□□ 1.45
PRDM5-201ENST00000264808 SRPK2P78362 688 aaKnown RBP24.1■■□□□ 1.45
PRDM5-201ENST00000264808 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.45
PRDM5-201ENST00000264808 ANP32AP39687 249 aaKnown RBP24.08■■□□□ 1.44
PRDM5-201ENST00000264808 MPHOSPH9Q99550 1183 aa24.07■■□□□ 1.44
PRDM5-201ENST00000264808 EIF3AQ14152 1382 aaKnown RBP24.07■■□□□ 1.44
PRDM5-201ENST00000264808 HDGFL2Q7Z4V5 671 aaPredicted RBP24.05■■□□□ 1.44
PRDM5-201ENST00000264808 UACAQ9BZF9 1416 aa23.98■■□□□ 1.43
PRDM5-201ENST00000264808 CCDC136Q96JN2 1154 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms