RNA–Protein interactions for RNA: ENST00000263672.10

SPCS2-201, Transcript of signal peptidase complex subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPCS2, Length 2,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2-201ENST00000263672 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
SPCS2-201ENST00000263672 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
SPCS2-201ENST00000263672 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
SPCS2-201ENST00000263672 PHLDB1Q86UU1 1377 aa23.8■■□□□ 1.4
SPCS2-201ENST00000263672 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
SPCS2-201ENST00000263672 NEUROD1Q13562 356 aa23.8■■□□□ 1.4
SPCS2-201ENST00000263672 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
SPCS2-201ENST00000263672 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
SPCS2-201ENST00000263672 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
SPCS2-201ENST00000263672 YTHDC1Q96MU7 727 aaKnown RBP23.74■■□□□ 1.39
SPCS2-201ENST00000263672 CUL7Q14999 1698 aa23.73■■□□□ 1.39
SPCS2-201ENST00000263672 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
SPCS2-201ENST00000263672 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
SPCS2-201ENST00000263672 MIER1Q8N108 512 aa23.71■■□□□ 1.39
SPCS2-201ENST00000263672 RAB3GAP2Q9H2M9 1393 aa23.7■■□□□ 1.38
SPCS2-201ENST00000263672 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.38
SPCS2-201ENST00000263672 CTTNBP2Q8WZ74 1663 aa23.69■■□□□ 1.38
SPCS2-201ENST00000263672 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
SPCS2-201ENST00000263672 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
SPCS2-201ENST00000263672 CLSPNQ9HAW4 1339 aa23.64■■□□□ 1.38
SPCS2-201ENST00000263672 CFAP43Q8NDM7 1665 aa23.64■■□□□ 1.37
SPCS2-201ENST00000263672 EFCAB5A4FU69 1503 aa23.63■■□□□ 1.37
SPCS2-201ENST00000263672 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
SPCS2-201ENST00000263672 CASKIN1Q8WXD9 1431 aa23.62■■□□□ 1.37
SPCS2-201ENST00000263672 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.379e-7■■■■□ 25
SPCS2-201ENST00000263672 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
SPCS2-201ENST00000263672 FMN1Q68DA7 1419 aa23.56■■□□□ 1.36
SPCS2-201ENST00000263672 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
SPCS2-201ENST00000263672 SETD5Q9C0A6 1442 aa23.55■■□□□ 1.36
SPCS2-201ENST00000263672 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
SPCS2-201ENST00000263672 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
SPCS2-201ENST00000263672 MTUS2Q5JR59 1369 aa23.53■■□□□ 1.36
SPCS2-201ENST00000263672 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
SPCS2-201ENST00000263672 SIN3AQ96ST3 1273 aa23.51■■□□□ 1.35
SPCS2-201ENST00000263672 MAPKBP1O60336 1514 aa23.51■■□□□ 1.35
SPCS2-201ENST00000263672 SAMD9Q5K651 1589 aa23.48■■□□□ 1.35
SPCS2-201ENST00000263672 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
SPCS2-201ENST00000263672 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
SPCS2-201ENST00000263672 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
SPCS2-201ENST00000263672 FGD6Q6ZV73 1430 aa23.43■■□□□ 1.34
SPCS2-201ENST00000263672 PBRM1Q86U86 1689 aa23.42■■□□□ 1.34
SPCS2-201ENST00000263672 GRIN2BQ13224 1484 aa23.4■■□□□ 1.34
SPCS2-201ENST00000263672 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
SPCS2-201ENST00000263672 PTPRKQ15262 1439 aa23.36■■□□□ 1.33
SPCS2-201ENST00000263672 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
SPCS2-201ENST00000263672 MAGI3Q5TCQ9 1506 aa23.33■■□□□ 1.33
SPCS2-201ENST00000263672 IQGAP2Q13576 1575 aa23.32■■□□□ 1.32
SPCS2-201ENST00000263672 CHIC2Q9UKJ5 165 aa23.31■■□□□ 1.32
SPCS2-201ENST00000263672 HIRIP3Q9BW71 556 aaPredicted RBP23.3■■□□□ 1.32
SPCS2-201ENST00000263672 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
SPCS2-201ENST00000263672 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
SPCS2-201ENST00000263672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.26■■□□□ 1.31
SPCS2-201ENST00000263672 RRP7BPQ9NSQ0 103 aa23.25■■□□□ 1.31
SPCS2-201ENST00000263672 CCDC18Q5T9S5 1454 aa23.25■■□□□ 1.31
SPCS2-201ENST00000263672 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
SPCS2-201ENST00000263672 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
SPCS2-201ENST00000263672 FBLN2P98095 1184 aa23.24■■□□□ 1.31
SPCS2-201ENST00000263672 EHBP1L1Q8N3D4 1523 aa23.23■■□□□ 1.31
SPCS2-201ENST00000263672 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
SPCS2-201ENST00000263672 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
SPCS2-201ENST00000263672 WDR62O43379 1518 aa23.21■■□□□ 1.31
SPCS2-201ENST00000263672 THOC2Q8NI27 1593 aaKnown RBP23.2■■□□□ 1.31
SPCS2-201ENST00000263672 UGGT2Q9NYU1 1516 aa23.19■■□□□ 1.3
SPCS2-201ENST00000263672 PTPN23Q9H3S7 1636 aa23.18■■□□□ 1.3
SPCS2-201ENST00000263672 HFM1A2PYH4 1435 aa23.18■■□□□ 1.3
SPCS2-201ENST00000263672 HECW1Q76N89 1606 aa23.18■■□□□ 1.3
SPCS2-201ENST00000263672 NAIPQ13075 1403 aa23.18■■□□□ 1.3
SPCS2-201ENST00000263672 EIF4G3O43432 1585 aaKnown RBP23.16■■□□□ 1.3
SPCS2-201ENST00000263672 DDX10Q13206 875 aaKnown RBP23.15■■□□□ 1.3
SPCS2-201ENST00000263672 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
SPCS2-201ENST00000263672 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
SPCS2-201ENST00000263672 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
SPCS2-201ENST00000263672 PPP1R15AO75807 674 aaPredicted RBP23.11■■□□□ 1.29
SPCS2-201ENST00000263672 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
SPCS2-201ENST00000263672 UACAQ9BZF9 1416 aa23.1■■□□□ 1.29
SPCS2-201ENST00000263672 DISP1Q96F81 1524 aa23.1■■□□□ 1.29
SPCS2-201ENST00000263672 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
SPCS2-201ENST00000263672 TONSLQ96HA7 1378 aa23.1■■□□□ 1.29
SPCS2-201ENST00000263672 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
SPCS2-201ENST00000263672 ZNF644Q9H582 1327 aaPredicted RBP23.07■■□□□ 1.28
SPCS2-201ENST00000263672 KIAA0556O60303 1618 aa23.06■■□□□ 1.28
SPCS2-201ENST00000263672 FOXD1Q16676 465 aa23.04■■□□□ 1.28
SPCS2-201ENST00000263672 KDM6BO15054 1643 aa23.03■■□□□ 1.28
SPCS2-201ENST00000263672 NUP153P49790 1475 aaKnown RBP23.03■■□□□ 1.28
SPCS2-201ENST00000263672 TIMELESSQ9UNS1 1208 aa23.01■■□□□ 1.27
SPCS2-201ENST00000263672 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
SPCS2-201ENST00000263672 PLB1Q6P1J6 1458 aa22.98■■□□□ 1.27
SPCS2-201ENST00000263672 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
SPCS2-201ENST00000263672 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.27
SPCS2-201ENST00000263672 RAPGEF6Q8TEU7 1601 aa22.95■■□□□ 1.26
SPCS2-201ENST00000263672 ZNF777Q9ULD5 760 aaPredicted RBP22.94■■□□□ 1.26
SPCS2-201ENST00000263672 MIA2Q96PC5 1412 aa22.93■■□□□ 1.26
SPCS2-201ENST00000263672 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
SPCS2-201ENST00000263672 DENND4BO75064 1496 aaPredicted RBP22.93■■□□□ 1.26
SPCS2-201ENST00000263672 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
SPCS2-201ENST00000263672 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
SPCS2-201ENST00000263672 MPHOSPH9Q99550 1183 aa22.91■■□□□ 1.26
SPCS2-201ENST00000263672 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
SPCS2-201ENST00000263672 GCC2Q8IWJ2 1684 aa22.89■■□□□ 1.25
SPCS2-201ENST00000263672 DAPK1P53355 1430 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms