RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 FAM9BQ8IZU0 186 aa22.61■■□□□ 1.21
PDZRN3-201ENST00000263666 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
PDZRN3-201ENST00000263666 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
PDZRN3-201ENST00000263666 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
PDZRN3-201ENST00000263666 CUX2O14529 1486 aa22.56■■□□□ 1.2
PDZRN3-201ENST00000263666 MTUS2Q5JR59 1369 aa22.52■■□□□ 1.2
PDZRN3-201ENST00000263666 ZNF777Q9ULD5 760 aaPredicted RBP22.51■■□□□ 1.19
PDZRN3-201ENST00000263666 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
PDZRN3-201ENST00000263666 CLSPNQ9HAW4 1339 aa22.5■■□□□ 1.19
PDZRN3-201ENST00000263666 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
PDZRN3-201ENST00000263666 KIF21BO75037 1637 aa22.48■■□□□ 1.19
PDZRN3-201ENST00000263666 CARMIL1Q5VZK9 1371 aa22.48■■□□□ 1.19
PDZRN3-201ENST00000263666 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
PDZRN3-201ENST00000263666 TSHZ2Q9NRE2 1034 aa22.46■■□□□ 1.19
PDZRN3-201ENST00000263666 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
PDZRN3-201ENST00000263666 SALL2Q9Y467 1007 aaPredicted RBP22.41■■□□□ 1.18
PDZRN3-201ENST00000263666 FOXD1Q16676 465 aa22.4■■□□□ 1.18
PDZRN3-201ENST00000263666 SETD5Q9C0A6 1442 aa22.39■■□□□ 1.17
PDZRN3-201ENST00000263666 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
PDZRN3-201ENST00000263666 MRS2Q9HD23 443 aa22.36■■□□□ 1.17
PDZRN3-201ENST00000263666 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.17
PDZRN3-201ENST00000263666 DNAJC5BQ9UF47 199 aa22.33■■□□□ 1.16
PDZRN3-201ENST00000263666 FHOD3Q2V2M9 1422 aa22.32■■□□□ 1.16
PDZRN3-201ENST00000263666 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
PDZRN3-201ENST00000263666 ANP32EQ9BTT0 268 aa22.29■■□□□ 1.16
PDZRN3-201ENST00000263666 PPP1R15AO75807 674 aaPredicted RBP22.27■■□□□ 1.16
PDZRN3-201ENST00000263666 CC2D2AQ9P2K1 1620 aa22.27■■□□□ 1.16
PDZRN3-201ENST00000263666 EIF4G2P78344 907 aaKnown RBP eCLIP22.25■■□□□ 1.15
PDZRN3-201ENST00000263666 KDM2AQ9Y2K7 1162 aa22.23■■□□□ 1.15
PDZRN3-201ENST00000263666 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
PDZRN3-201ENST00000263666 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
PDZRN3-201ENST00000263666 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
PDZRN3-201ENST00000263666 IGF1RP08069 1367 aa22.19■■□□□ 1.14
PDZRN3-201ENST00000263666 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
PDZRN3-201ENST00000263666 B4GALNT3Q6L9W6 998 aa22.19■■□□□ 1.14
PDZRN3-201ENST00000263666 NESP48681 1621 aa22.19■■□□□ 1.14
PDZRN3-201ENST00000263666 HSPA5P11021 654 aaKnown RBP22.18■■□□□ 1.14
PDZRN3-201ENST00000263666 NBR1Q14596 966 aa22.16■■□□□ 1.14
PDZRN3-201ENST00000263666 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
PDZRN3-201ENST00000263666 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
PDZRN3-201ENST00000263666 CFTRP13569 1480 aa22.13■■□□□ 1.13
PDZRN3-201ENST00000263666 PRXQ9BXM0 1461 aa22.12■■□□□ 1.13
PDZRN3-201ENST00000263666 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
PDZRN3-201ENST00000263666 NPM1P06748 294 aaKnown RBP eCLIP22.11■■□□□ 1.13
PDZRN3-201ENST00000263666 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
PDZRN3-201ENST00000263666 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
PDZRN3-201ENST00000263666 CUX1P39880 1505 aa22.06■■□□□ 1.12
PDZRN3-201ENST00000263666 RRBP1Q9P2E9 1410 aaKnown RBP22.05■■□□□ 1.12
PDZRN3-201ENST00000263666 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
PDZRN3-201ENST00000263666 CCER2I3L3R5 266 aa22.04■■□□□ 1.12
PDZRN3-201ENST00000263666 CCDC136Q96JN2 1154 aa22.04■■□□□ 1.12
PDZRN3-201ENST00000263666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.12
PDZRN3-201ENST00000263666 PLEKHD1A6NEE1 506 aa22.03■■□□□ 1.12
PDZRN3-201ENST00000263666 L3MBTL2Q969R5 705 aa22.02■■□□□ 1.12
PDZRN3-201ENST00000263666 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
PDZRN3-201ENST00000263666 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
PDZRN3-201ENST00000263666 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
PDZRN3-201ENST00000263666 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
PDZRN3-201ENST00000263666 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
PDZRN3-201ENST00000263666 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
PDZRN3-201ENST00000263666 TIMELESSQ9UNS1 1208 aa21.96■■□□□ 1.11
PDZRN3-201ENST00000263666 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
PDZRN3-201ENST00000263666 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
PDZRN3-201ENST00000263666 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
PDZRN3-201ENST00000263666 CFDP1Q9UEE9 299 aaPredicted RBP21.91■■□□□ 1.1
PDZRN3-201ENST00000263666 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
PDZRN3-201ENST00000263666 DAXXQ9UER7 740 aaPredicted RBP21.9■■□□□ 1.1
PDZRN3-201ENST00000263666 CCDC184Q52MB2 194 aa21.9■■□□□ 1.1
PDZRN3-201ENST00000263666 ANP32AP39687 249 aaKnown RBP21.9■■□□□ 1.1
PDZRN3-201ENST00000263666 PPP4R2Q9NY27 417 aa21.88■■□□□ 1.09
PDZRN3-201ENST00000263666 CCDC18Q5T9S5 1454 aa21.88■■□□□ 1.09
PDZRN3-201ENST00000263666 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.09
PDZRN3-201ENST00000263666 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
PDZRN3-201ENST00000263666 CARD11Q9BXL7 1154 aa21.83■■□□□ 1.09
PDZRN3-201ENST00000263666 ZNF644Q9H582 1327 aaPredicted RBP21.83■■□□□ 1.09
PDZRN3-201ENST00000263666 FMN1Q68DA7 1419 aa21.83■■□□□ 1.09
PDZRN3-201ENST00000263666 BCL11AQ9H165 835 aa21.83■■□□□ 1.08
PDZRN3-201ENST00000263666 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
PDZRN3-201ENST00000263666 WASHC2AQ641Q2 1341 aa21.81■■□□□ 1.08
PDZRN3-201ENST00000263666 FGD6Q6ZV73 1430 aa21.8■■□□□ 1.08
PDZRN3-201ENST00000263666 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
PDZRN3-201ENST00000263666 PKD2Q13563 968 aa21.78■■□□□ 1.08
PDZRN3-201ENST00000263666 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
PDZRN3-201ENST00000263666 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
PDZRN3-201ENST00000263666 PRKRIP1Q9H875 184 aaPredicted RBP21.76■■□□□ 1.07
PDZRN3-201ENST00000263666 DCAF11Q8TEB1 546 aa21.75■■□□□ 1.07
PDZRN3-201ENST00000263666 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
PDZRN3-201ENST00000263666 ZBTB47Q9UFB7 747 aaPredicted RBP21.74■■□□□ 1.07
PDZRN3-201ENST00000263666 CARMIL2Q6F5E8 1435 aa21.74■■□□□ 1.07
PDZRN3-201ENST00000263666 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
PDZRN3-201ENST00000263666 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
PDZRN3-201ENST00000263666 C11orf95C9JLR9 678 aaPredicted RBP21.68■■□□□ 1.06
PDZRN3-201ENST00000263666 LAS1LQ9Y4W2 734 aaKnown RBP21.67■■□□□ 1.06
PDZRN3-201ENST00000263666 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
PDZRN3-201ENST00000263666 NBPF8Q3BBV2 869 aa21.66■■□□□ 1.06
PDZRN3-201ENST00000263666 CHGAP10645 457 aaKnown RBP21.65■■□□□ 1.06
PDZRN3-201ENST00000263666 UACAQ9BZF9 1416 aa21.65■■□□□ 1.06
PDZRN3-201ENST00000263666 NCOA2Q15596 1464 aa21.64■■□□□ 1.05
PDZRN3-201ENST00000263666 PCF11O94913 1555 aaKnown RBP21.62■■□□□ 1.05
PDZRN3-201ENST00000263666 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms