RNA–Protein interactions for RNA: ENST00000257566.7

TBX3-201, Transcript of T-box 3, humanhuman

TSL 1 (best) BASIC

Gene TBX3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBX3-201ENST00000257566 ARXQ96QS3 562 aa17.22■□□□□ 0.35
TBX3-201ENST00000257566 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
TBX3-201ENST00000257566 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
TBX3-201ENST00000257566 NAP1L5Q96NT1 182 aaPredicted RBP17.2■□□□□ 0.34
TBX3-201ENST00000257566 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
TBX3-201ENST00000257566 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
TBX3-201ENST00000257566 ANP32CO43423 234 aa17.17■□□□□ 0.34
TBX3-201ENST00000257566 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
TBX3-201ENST00000257566 FAM50AQ14320 339 aaKnown RBP17.15■□□□□ 0.34
TBX3-201ENST00000257566 UBE2Q2Q8WVN8 375 aa17.15■□□□□ 0.34
TBX3-201ENST00000257566 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
TBX3-201ENST00000257566 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
TBX3-201ENST00000257566 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
TBX3-201ENST00000257566 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
TBX3-201ENST00000257566 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
TBX3-201ENST00000257566 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
TBX3-201ENST00000257566 IL27Q8NEV9 243 aa17.01■□□□□ 0.31
TBX3-201ENST00000257566 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
TBX3-201ENST00000257566 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
TBX3-201ENST00000257566 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
TBX3-201ENST00000257566 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
TBX3-201ENST00000257566 HSP90AA1P07900 732 aaKnown RBP16.97■□□□□ 0.31
TBX3-201ENST00000257566 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
TBX3-201ENST00000257566 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
TBX3-201ENST00000257566 HSP90AA2PQ14568 343 aaPredicted RBP16.96■□□□□ 0.31
TBX3-201ENST00000257566 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
TBX3-201ENST00000257566 RSPH6AQ9H0K4 717 aa16.94■□□□□ 0.3
TBX3-201ENST00000257566 PPM1GO15355 546 aaPredicted RBP16.94■□□□□ 0.3
TBX3-201ENST00000257566 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
TBX3-201ENST00000257566 VPS8Q8N3P4 1428 aa16.91■□□□□ 0.3
TBX3-201ENST00000257566 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
TBX3-201ENST00000257566 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
TBX3-201ENST00000257566 CUX2O14529 1486 aa16.88■□□□□ 0.29
TBX3-201ENST00000257566 ANP32BQ92688 251 aaKnown RBP16.84■□□□□ 0.29
TBX3-201ENST00000257566 PNNQ9H307 717 aaKnown RBP16.82■□□□□ 0.28
TBX3-201ENST00000257566 FBLN2P98095 1184 aa16.81■□□□□ 0.28
TBX3-201ENST00000257566 B4GALNT3Q6L9W6 998 aa16.81■□□□□ 0.28
TBX3-201ENST00000257566 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
TBX3-201ENST00000257566 TRIM44Q96DX7 344 aaPredicted RBP16.8■□□□□ 0.28
TBX3-201ENST00000257566 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
TBX3-201ENST00000257566 FANCIQ9NVI1 1328 aa16.79■□□□□ 0.28
TBX3-201ENST00000257566 EIF4G1Q04637 1599 aaKnown RBP16.78■□□□□ 0.28
TBX3-201ENST00000257566 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
TBX3-201ENST00000257566 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
TBX3-201ENST00000257566 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
TBX3-201ENST00000257566 ARID3AQ99856 593 aa16.75■□□□□ 0.27
TBX3-201ENST00000257566 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
TBX3-201ENST00000257566 PDE4CQ08493 712 aa16.75■□□□□ 0.27
TBX3-201ENST00000257566 ZMYND15Q9H091 742 aa16.72■□□□□ 0.27
TBX3-201ENST00000257566 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
TBX3-201ENST00000257566 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
TBX3-201ENST00000257566 DDRGK1Q96HY6 314 aa16.69■□□□□ 0.26
TBX3-201ENST00000257566 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
TBX3-201ENST00000257566 IPO9Q96P70 1041 aaKnown RBP16.67■□□□□ 0.26
TBX3-201ENST00000257566 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
TBX3-201ENST00000257566 MSH5O43196 834 aa16.66■□□□□ 0.26
TBX3-201ENST00000257566 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
TBX3-201ENST00000257566 BRPF3Q9ULD4 1205 aa16.65■□□□□ 0.26
TBX3-201ENST00000257566 KIF21BO75037 1637 aa16.64■□□□□ 0.25
TBX3-201ENST00000257566 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
TBX3-201ENST00000257566 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
TBX3-201ENST00000257566 IGF1RP08069 1367 aa16.63■□□□□ 0.25
TBX3-201ENST00000257566 CUX1P39880 1505 aa16.61■□□□□ 0.25
TBX3-201ENST00000257566 SENP3-EIF4A1A0A087X0R7 540 aa16.61■□□□□ 0.25
TBX3-201ENST00000257566 CFTRP13569 1480 aa16.61■□□□□ 0.25
TBX3-201ENST00000257566 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
TBX3-201ENST00000257566 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
TBX3-201ENST00000257566 GSE1Q14687 1217 aa16.59■□□□□ 0.25
TBX3-201ENST00000257566 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.24
TBX3-201ENST00000257566 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
TBX3-201ENST00000257566 RRP7BPQ9NSQ0 103 aa16.57■□□□□ 0.24
TBX3-201ENST00000257566 ZNF777Q9ULD5 760 aaPredicted RBP16.57■□□□□ 0.24
TBX3-201ENST00000257566 ARAP1Q96P48 1450 aa16.57■□□□□ 0.24
TBX3-201ENST00000257566 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
TBX3-201ENST00000257566 FHOD3Q2V2M9 1422 aa16.56■□□□□ 0.24
TBX3-201ENST00000257566 USP35Q9P2H5 1018 aa16.56■□□□□ 0.24
TBX3-201ENST00000257566 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
TBX3-201ENST00000257566 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
TBX3-201ENST00000257566 L1TD1Q5T7N2 865 aaKnown RBP16.53■□□□□ 0.24
TBX3-201ENST00000257566 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
TBX3-201ENST00000257566 NESP48681 1621 aa16.51■□□□□ 0.23
TBX3-201ENST00000257566 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
TBX3-201ENST00000257566 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
TBX3-201ENST00000257566 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
TBX3-201ENST00000257566 PAK3O75914 559 aaPredicted RBP16.5■□□□□ 0.23
TBX3-201ENST00000257566 DHX57Q6P158 1386 aaKnown RBP16.5■□□□□ 0.23
TBX3-201ENST00000257566 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
TBX3-201ENST00000257566 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
TBX3-201ENST00000257566 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
TBX3-201ENST00000257566 DNTTIP2Q5QJE6 756 aaKnown RBP16.46■□□□□ 0.23
TBX3-201ENST00000257566 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
TBX3-201ENST00000257566 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
TBX3-201ENST00000257566 MRS2Q9HD23 443 aa16.45■□□□□ 0.22
TBX3-201ENST00000257566 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
TBX3-201ENST00000257566 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
TBX3-201ENST00000257566 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
TBX3-201ENST00000257566 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
TBX3-201ENST00000257566 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
TBX3-201ENST00000257566 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
TBX3-201ENST00000257566 BECN1Q14457 450 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms