RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
SLC52A1-201ENST00000254853 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
SLC52A1-201ENST00000254853 PCF11O94913 1555 aaKnown RBP24.68■■□□□ 1.54
SLC52A1-201ENST00000254853 CFAP43Q8NDM7 1665 aa24.67■■□□□ 1.54
SLC52A1-201ENST00000254853 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
SLC52A1-201ENST00000254853 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
SLC52A1-201ENST00000254853 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
SLC52A1-201ENST00000254853 CC2D2AQ9P2K1 1620 aa24.62■■□□□ 1.53
SLC52A1-201ENST00000254853 RAD54L2Q9Y4B4 1467 aa24.61■■□□□ 1.53
SLC52A1-201ENST00000254853 FHOD3Q2V2M9 1422 aa24.61■■□□□ 1.53
SLC52A1-201ENST00000254853 SIN3AQ96ST3 1273 aa24.59■■□□□ 1.53
SLC52A1-201ENST00000254853 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.53
SLC52A1-201ENST00000254853 ABCA10Q8WWZ4 1543 aa24.57■■□□□ 1.52
SLC52A1-201ENST00000254853 SUPT16HQ9Y5B9 1047 aaKnown RBP24.57■■□□□ 1.52
SLC52A1-201ENST00000254853 DNAJC5BQ9UF47 199 aa24.56■■□□□ 1.52
SLC52A1-201ENST00000254853 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
SLC52A1-201ENST00000254853 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
SLC52A1-201ENST00000254853 FYCO1Q9BQS8 1478 aa24.54■■□□□ 1.52
SLC52A1-201ENST00000254853 TOPBP1Q92547 1522 aa24.53■■□□□ 1.52
SLC52A1-201ENST00000254853 EFCAB5A4FU69 1503 aa24.53■■□□□ 1.52
SLC52A1-201ENST00000254853 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
SLC52A1-201ENST00000254853 CASKIN1Q8WXD9 1431 aa24.52■■□□□ 1.52
SLC52A1-201ENST00000254853 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.51
SLC52A1-201ENST00000254853 CUL7Q14999 1698 aa24.47■■□□□ 1.51
SLC52A1-201ENST00000254853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.46■■□□□ 1.51
SLC52A1-201ENST00000254853 NESP48681 1621 aa24.46■■□□□ 1.51
SLC52A1-201ENST00000254853 DDX10Q13206 875 aaKnown RBP24.44■■□□□ 1.5
SLC52A1-201ENST00000254853 CTTNBP2Q8WZ74 1663 aa24.44■■□□□ 1.5
SLC52A1-201ENST00000254853 MYT1Q01538 1121 aa24.43■■□□□ 1.5
SLC52A1-201ENST00000254853 TIMELESSQ9UNS1 1208 aa24.43■■□□□ 1.5
SLC52A1-201ENST00000254853 FMN1Q68DA7 1419 aa24.39■■□□□ 1.5
SLC52A1-201ENST00000254853 FGD6Q6ZV73 1430 aa24.39■■□□□ 1.49
SLC52A1-201ENST00000254853 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
SLC52A1-201ENST00000254853 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
SLC52A1-201ENST00000254853 HIRIP3Q9BW71 556 aaPredicted RBP24.33■■□□□ 1.49
SLC52A1-201ENST00000254853 MTUS2Q5JR59 1369 aa24.32■■□□□ 1.48
SLC52A1-201ENST00000254853 URB2Q14146 1524 aaKnown RBP24.31■■□□□ 1.48
SLC52A1-201ENST00000254853 PTPRKQ15262 1439 aa24.3■■□□□ 1.48
SLC52A1-201ENST00000254853 CCDC18Q5T9S5 1454 aa24.3■■□□□ 1.48
SLC52A1-201ENST00000254853 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
SLC52A1-201ENST00000254853 SAMD9Q5K651 1589 aa24.27■■□□□ 1.48
SLC52A1-201ENST00000254853 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
SLC52A1-201ENST00000254853 LRRIQ1Q96JM4 1722 aa24.25■■□□□ 1.47
SLC52A1-201ENST00000254853 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
SLC52A1-201ENST00000254853 TONSLQ96HA7 1378 aa24.24■■□□□ 1.47
SLC52A1-201ENST00000254853 UACAQ9BZF9 1416 aa24.23■■□□□ 1.47
SLC52A1-201ENST00000254853 PTPN23Q9H3S7 1636 aa24.23■■□□□ 1.47
SLC52A1-201ENST00000254853 GRIN2BQ13224 1484 aa24.23■■□□□ 1.47
SLC52A1-201ENST00000254853 NCOA2Q15596 1464 aa24.23■■□□□ 1.47
SLC52A1-201ENST00000254853 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
SLC52A1-201ENST00000254853 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
SLC52A1-201ENST00000254853 MYOM3Q5VTT5 1437 aa24.21■■□□□ 1.47
SLC52A1-201ENST00000254853 TSHZ2Q9NRE2 1034 aa24.2■■□□□ 1.46
SLC52A1-201ENST00000254853 NAIPQ13075 1403 aa24.19■■□□□ 1.46
SLC52A1-201ENST00000254853 CCER2I3L3R5 266 aa24.18■■□□□ 1.46
SLC52A1-201ENST00000254853 ANP32CO43423 234 aa24.17■■□□□ 1.46
SLC52A1-201ENST00000254853 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
SLC52A1-201ENST00000254853 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
SLC52A1-201ENST00000254853 EHBP1L1Q8N3D4 1523 aa24.14■■□□□ 1.46
SLC52A1-201ENST00000254853 FKBP8Q14318 412 aa24.13■■□□□ 1.45
SLC52A1-201ENST00000254853 BCANQ96GW7 911 aa24.13■■□□□ 1.45
SLC52A1-201ENST00000254853 UGGT2Q9NYU1 1516 aa24.1■■□□□ 1.45
SLC52A1-201ENST00000254853 MAGI3Q5TCQ9 1506 aa24.09■■□□□ 1.45
SLC52A1-201ENST00000254853 TRIM52Q96A61 297 aa24.08■■□□□ 1.45
SLC52A1-201ENST00000254853 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.45
SLC52A1-201ENST00000254853 ARHGEF11O15085 1522 aa24.08■■□□□ 1.44
SLC52A1-201ENST00000254853 KDM5BQ9UGL1 1544 aa24.07■■□□□ 1.44
SLC52A1-201ENST00000254853 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
SLC52A1-201ENST00000254853 KIF21AQ7Z4S6 1674 aa24.03■■□□□ 1.44
SLC52A1-201ENST00000254853 CHIC2Q9UKJ5 165 aa24.01■■□□□ 1.43
SLC52A1-201ENST00000254853 TCOF1Q13428 1488 aaKnown RBP24.01■■□□□ 1.43
SLC52A1-201ENST00000254853 TARBP1Q13395 1621 aaKnown RBP24.01■■□□□ 1.43
SLC52A1-201ENST00000254853 NEFLP07196 543 aa23.98■■□□□ 1.43
SLC52A1-201ENST00000254853 DENND4BO75064 1496 aaPredicted RBP23.96■■□□□ 1.43
SLC52A1-201ENST00000254853 HECW1Q76N89 1606 aa23.96■■□□□ 1.43
SLC52A1-201ENST00000254853 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.43
SLC52A1-201ENST00000254853 EPRSP07814 1512 aaKnown RBP23.94■■□□□ 1.42
SLC52A1-201ENST00000254853 KDM6BO15054 1643 aa23.93■■□□□ 1.42
SLC52A1-201ENST00000254853 IQGAP2Q13576 1575 aa23.92■■□□□ 1.42
SLC52A1-201ENST00000254853 AKNAQ7Z591 1439 aa23.91■■□□□ 1.42
SLC52A1-201ENST00000254853 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
SLC52A1-201ENST00000254853 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
SLC52A1-201ENST00000254853 CDK13Q14004 1512 aaKnown RBP23.9■■□□□ 1.42
SLC52A1-201ENST00000254853 WASHC2AQ641Q2 1341 aa23.89■■□□□ 1.41
SLC52A1-201ENST00000254853 MIA2Q96PC5 1412 aa23.87■■□□□ 1.41
SLC52A1-201ENST00000254853 ARID3CA6NKF2 412 aa23.87■■□□□ 1.41
SLC52A1-201ENST00000254853 MPHOSPH9Q99550 1183 aa23.86■■□□□ 1.41
SLC52A1-201ENST00000254853 ADAMTS12P58397 1594 aa23.85■■□□□ 1.41
SLC52A1-201ENST00000254853 WDR62O43379 1518 aa23.85■■□□□ 1.41
SLC52A1-201ENST00000254853 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.4
SLC52A1-201ENST00000254853 HNRNPUQ00839 825 aaKnown RBP eCLIP23.81■■□□□ 1.4
SLC52A1-201ENST00000254853 FOXD1Q16676 465 aa23.81■■□□□ 1.4
SLC52A1-201ENST00000254853 L3MBTL2Q969R5 705 aa23.8■■□□□ 1.4
SLC52A1-201ENST00000254853 ANP32EQ9BTT0 268 aa23.76■■□□□ 1.39
SLC52A1-201ENST00000254853 DAPK1P53355 1430 aa23.74■■□□□ 1.39
SLC52A1-201ENST00000254853 CNTLNQ9NXG0 1405 aa23.74■■□□□ 1.39
SLC52A1-201ENST00000254853 ROCK1Q13464 1354 aa23.72■■□□□ 1.39
SLC52A1-201ENST00000254853 C11orf95C9JLR9 678 aaPredicted RBP23.72■■□□□ 1.39
SLC52A1-201ENST00000254853 RBM19Q9Y4C8 960 aaKnown RBP23.72■■□□□ 1.39
SLC52A1-201ENST00000254853 ANKRD30BQ9BXX2 1392 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms