RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 NISCHQ9Y2I1 1504 aa35.03■■■■□ 3.2
SLC52A1-201ENST00000254853 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
SLC52A1-201ENST00000254853 ZCCHC6Q5VYS8 1495 aaKnown RBP29.67■■■□□ 2.34
SLC52A1-201ENST00000254853 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
SLC52A1-201ENST00000254853 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
SLC52A1-201ENST00000254853 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
SLC52A1-201ENST00000254853 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
SLC52A1-201ENST00000254853 MYO15BQ96JP2 1530 aa28.76■■■□□ 2.19
SLC52A1-201ENST00000254853 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
SLC52A1-201ENST00000254853 HRCP23327 699 aa28.24■■■□□ 2.11
SLC52A1-201ENST00000254853 PCGF6Q9BYE7 350 aa28.1■■■□□ 2.09
SLC52A1-201ENST00000254853 ABCC9O60706 1549 aa28.03■■■□□ 2.08
SLC52A1-201ENST00000254853 LOC105371045A0A1W2PR82 267 aa27.97■■■□□ 2.07
SLC52A1-201ENST00000254853 SCRIBQ14160 1630 aa27.87■■■□□ 2.05
SLC52A1-201ENST00000254853 RSF1Q96T23 1441 aaPredicted RBP27.81■■■□□ 2.04
SLC52A1-201ENST00000254853 PPARGC1BQ86YN6 1023 aaKnown RBP27.64■■■□□ 2.02
SLC52A1-201ENST00000254853 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
SLC52A1-201ENST00000254853 TRIM26Q12899 539 aaPredicted RBP27.51■■□□□ 1.99
SLC52A1-201ENST00000254853 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
SLC52A1-201ENST00000254853 NACADO15069 1562 aa27.39■■□□□ 1.97
SLC52A1-201ENST00000254853 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
SLC52A1-201ENST00000254853 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
SLC52A1-201ENST00000254853 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
SLC52A1-201ENST00000254853 WIZO95785 1651 aa27.11■■□□□ 1.93
SLC52A1-201ENST00000254853 EHMT2Q96KQ7 1210 aa27.05■■□□□ 1.92
SLC52A1-201ENST00000254853 ZEB1P37275 1124 aaPredicted RBP26.98■■□□□ 1.91
SLC52A1-201ENST00000254853 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.9
SLC52A1-201ENST00000254853 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
SLC52A1-201ENST00000254853 TOP2AP11388 1531 aaKnown RBP26.68■■□□□ 1.86
SLC52A1-201ENST00000254853 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
SLC52A1-201ENST00000254853 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
SLC52A1-201ENST00000254853 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
SLC52A1-201ENST00000254853 SMARCA2P51531 1590 aa26.55■■□□□ 1.84
SLC52A1-201ENST00000254853 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
SLC52A1-201ENST00000254853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.39■■□□□ 1.82
SLC52A1-201ENST00000254853 SOGA1O94964 1423 aa26.38■■□□□ 1.81
SLC52A1-201ENST00000254853 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
SLC52A1-201ENST00000254853 CEP162Q5TB80 1403 aa26.34■■□□□ 1.81
SLC52A1-201ENST00000254853 CCER1Q8TC90 406 aaPredicted RBP26.32■■□□□ 1.8
SLC52A1-201ENST00000254853 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
SLC52A1-201ENST00000254853 RUSC2Q8N2Y8 1516 aa26.25■■□□□ 1.79
SLC52A1-201ENST00000254853 EEA1Q15075 1411 aa26.25■■□□□ 1.79
SLC52A1-201ENST00000254853 CSRNP3Q8WYN3 585 aa26.24■■□□□ 1.79
SLC52A1-201ENST00000254853 TTBK1Q5TCY1 1321 aaPredicted RBP26.23■■□□□ 1.79
SLC52A1-201ENST00000254853 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
SLC52A1-201ENST00000254853 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.78
SLC52A1-201ENST00000254853 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
SLC52A1-201ENST00000254853 SCAF1Q9H7N4 1312 aaKnown RBP26.14■■□□□ 1.77
SLC52A1-201ENST00000254853 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
SLC52A1-201ENST00000254853 GOLGA3Q08378 1498 aa26.09■■□□□ 1.77
SLC52A1-201ENST00000254853 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
SLC52A1-201ENST00000254853 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
SLC52A1-201ENST00000254853 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
SLC52A1-201ENST00000254853 DIEXFQ68CQ4 756 aaKnown RBP25.91■■□□□ 1.74
SLC52A1-201ENST00000254853 KIF21BO75037 1637 aa25.89■■□□□ 1.73
SLC52A1-201ENST00000254853 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
SLC52A1-201ENST00000254853 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
SLC52A1-201ENST00000254853 CLIP1P30622 1438 aa25.81■■□□□ 1.72
SLC52A1-201ENST00000254853 NEUROD1Q13562 356 aa25.78■■□□□ 1.72
SLC52A1-201ENST00000254853 PELP1Q8IZL8 1130 aaKnown RBP25.75■■□□□ 1.71
SLC52A1-201ENST00000254853 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
SLC52A1-201ENST00000254853 VPS8Q8N3P4 1428 aa25.72■■□□□ 1.71
SLC52A1-201ENST00000254853 HNRNPUL2Q1KMD3 747 aaKnown RBP25.7■■□□□ 1.7
SLC52A1-201ENST00000254853 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
SLC52A1-201ENST00000254853 CENPBP07199 599 aaPredicted RBP25.63■■□□□ 1.69
SLC52A1-201ENST00000254853 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
SLC52A1-201ENST00000254853 RANGAP1P46060 587 aaPredicted RBP25.6■■□□□ 1.69
SLC52A1-201ENST00000254853 APLP2Q06481 763 aa25.59■■□□□ 1.69
SLC52A1-201ENST00000254853 GTF3C3Q9Y5Q9 886 aa25.53■■□□□ 1.68
SLC52A1-201ENST00000254853 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
SLC52A1-201ENST00000254853 PRXQ9BXM0 1461 aa25.44■■□□□ 1.66
SLC52A1-201ENST00000254853 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
SLC52A1-201ENST00000254853 ARAP1Q96P48 1450 aa25.38■■□□□ 1.65
SLC52A1-201ENST00000254853 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
SLC52A1-201ENST00000254853 CUX1P39880 1505 aa25.36■■□□□ 1.65
SLC52A1-201ENST00000254853 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
SLC52A1-201ENST00000254853 MIER1Q8N108 512 aa25.34■■□□□ 1.65
SLC52A1-201ENST00000254853 YTHDC1Q96MU7 727 aaKnown RBP25.32■■□□□ 1.64
SLC52A1-201ENST00000254853 KANK4Q5T7N3 995 aaPredicted RBP25.28■■□□□ 1.64
SLC52A1-201ENST00000254853 KIF27Q86VH2 1401 aa25.28■■□□□ 1.64
SLC52A1-201ENST00000254853 DHX57Q6P158 1386 aaKnown RBP25.23■■□□□ 1.63
SLC52A1-201ENST00000254853 CFTRP13569 1480 aa25.22■■□□□ 1.63
SLC52A1-201ENST00000254853 CLSPNQ9HAW4 1339 aa25.2■■□□□ 1.62
SLC52A1-201ENST00000254853 RRBP1Q9P2E9 1410 aaKnown RBP25.15■■□□□ 1.62
SLC52A1-201ENST00000254853 ARHGAP35Q9NRY4 1499 aa25.13■■□□□ 1.61
SLC52A1-201ENST00000254853 CCNB3Q8WWL7 1395 aa25.03■■□□□ 1.6
SLC52A1-201ENST00000254853 CUX2O14529 1486 aa25.03■■□□□ 1.6
SLC52A1-201ENST00000254853 IGF1RP08069 1367 aa25■■□□□ 1.59
SLC52A1-201ENST00000254853 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
SLC52A1-201ENST00000254853 ITGAEP38570 1179 aa24.94■■□□□ 1.58
SLC52A1-201ENST00000254853 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
SLC52A1-201ENST00000254853 CARMIL1Q5VZK9 1371 aa24.89■■□□□ 1.58
SLC52A1-201ENST00000254853 TIAM1Q13009 1591 aa24.88■■□□□ 1.57
SLC52A1-201ENST00000254853 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
SLC52A1-201ENST00000254853 MAP3K1Q13233 1512 aa24.86■■□□□ 1.57
SLC52A1-201ENST00000254853 RAB3GAP2Q9H2M9 1393 aa24.84■■□□□ 1.57
SLC52A1-201ENST00000254853 LRRC9Q6ZRR7 1453 aa24.79■■□□□ 1.56
SLC52A1-201ENST00000254853 MAPKBP1O60336 1514 aa24.78■■□□□ 1.56
SLC52A1-201ENST00000254853 PHLDB1Q86UU1 1377 aa24.75■■□□□ 1.55
SLC52A1-201ENST00000254853 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms