RNA–Protein interactions for RNA: ENST00000251691.4

ARFGEF3-201, Transcript of ARFGEF family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF3, Length 14,877 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3-201ENST00000251691 GOLGA6L22H0YM25 854 aa9.71□□□□□ -0.86
ARFGEF3-201ENST00000251691 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
ARFGEF3-201ENST00000251691 VSIG10Q8N0Z9 540 aa9.69□□□□□ -0.86
ARFGEF3-201ENST00000251691 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
ARFGEF3-201ENST00000251691 L1TD1Q5T7N2 865 aaKnown RBP9.68□□□□□ -0.86
ARFGEF3-201ENST00000251691 PRKCSHP14314 528 aaPredicted RBP9.68□□□□□ -0.86
ARFGEF3-201ENST00000251691 ARID3AQ99856 593 aa9.67□□□□□ -0.86
ARFGEF3-201ENST00000251691 PNNQ9H307 717 aaKnown RBP9.66□□□□□ -0.86
ARFGEF3-201ENST00000251691 HSP90AA2PQ14568 343 aaPredicted RBP9.65□□□□□ -0.86
ARFGEF3-201ENST00000251691 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
ARFGEF3-201ENST00000251691 MYO15BQ96JP2 1530 aa9.63□□□□□ -0.87
ARFGEF3-201ENST00000251691 TPRNQ4KMQ1 711 aa9.62□□□□□ -0.87
ARFGEF3-201ENST00000251691 MSNP26038 577 aaKnown RBP9.62□□□□□ -0.87
ARFGEF3-201ENST00000251691 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
ARFGEF3-201ENST00000251691 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
ARFGEF3-201ENST00000251691 RGS3P49796 1198 aa9.6□□□□□ -0.87
ARFGEF3-201ENST00000251691 P3H3Q8IVL6 736 aa9.6□□□□□ -0.87
ARFGEF3-201ENST00000251691 TIMELESSQ9UNS1 1208 aa9.59□□□□□ -0.87
ARFGEF3-201ENST00000251691 GZF1Q9H116 711 aaPredicted RBP9.59□□□□□ -0.87
ARFGEF3-201ENST00000251691 IPO9Q96P70 1041 aaKnown RBP9.59□□□□□ -0.87
ARFGEF3-201ENST00000251691 CCDC180Q9P1Z9 1646 aa9.58□□□□□ -0.88
ARFGEF3-201ENST00000251691 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
ARFGEF3-201ENST00000251691 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
ARFGEF3-201ENST00000251691 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
ARFGEF3-201ENST00000251691 CHAF1AQ13111 956 aaPredicted RBP9.56□□□□□ -0.88
ARFGEF3-201ENST00000251691 EIF4G2P78344 907 aaKnown RBP eCLIP9.55□□□□□ -0.88
ARFGEF3-201ENST00000251691 TNNT3P45378 269 aaPredicted RBP9.55□□□□□ -0.88
ARFGEF3-201ENST00000251691 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
ARFGEF3-201ENST00000251691 ARID3CA6NKF2 412 aa9.54□□□□□ -0.88
ARFGEF3-201ENST00000251691 PKNOX2Q96KN3 472 aa9.54□□□□□ -0.88
ARFGEF3-201ENST00000251691 HSP90AB1P08238 724 aaKnown RBP9.54□□□□□ -0.88
ARFGEF3-201ENST00000251691 A0A0U1RQG5 324 aaPredicted RBP9.52□□□□□ -0.89
ARFGEF3-201ENST00000251691 GOLGA6L3A6NEY3 463 aa9.52□□□□□ -0.89
ARFGEF3-201ENST00000251691 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
ARFGEF3-201ENST00000251691 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
ARFGEF3-201ENST00000251691 USP35Q9P2H5 1018 aa9.48□□□□□ -0.89
ARFGEF3-201ENST00000251691 ZRSR1Q15695 479 aaKnown RBP9.48□□□□□ -0.89
ARFGEF3-201ENST00000251691 CHIC2Q9UKJ5 165 aa9.48□□□□□ -0.89
ARFGEF3-201ENST00000251691 SLKQ9H2G2 1235 aaPredicted RBP9.48□□□□□ -0.89
ARFGEF3-201ENST00000251691 PODXL2Q9NZ53 605 aa9.48□□□□□ -0.89
ARFGEF3-201ENST00000251691 ZNF777Q9ULD5 760 aaPredicted RBP9.48□□□□□ -0.89
ARFGEF3-201ENST00000251691 GSE1Q14687 1217 aa9.47□□□□□ -0.89
ARFGEF3-201ENST00000251691 CASC1Q6TDU7 716 aa9.47□□□□□ -0.89
ARFGEF3-201ENST00000251691 CCER2I3L3R5 266 aa9.47□□□□□ -0.89
ARFGEF3-201ENST00000251691 FANCIQ9NVI1 1328 aa9.47□□□□□ -0.89
ARFGEF3-201ENST00000251691 TCERG1O14776 1098 aaKnown RBP9.46□□□□□ -0.89
ARFGEF3-201ENST00000251691 FTSJ3Q8IY81 847 aaKnown RBP9.45□□□□□ -0.9
ARFGEF3-201ENST00000251691 DRC7Q8IY82 874 aa9.45□□□□□ -0.9
ARFGEF3-201ENST00000251691 KIAA2012Q0VF49 1180 aa9.44□□□□□ -0.9
ARFGEF3-201ENST00000251691 GOLGA6L6A8MZA4 724 aa9.44□□□□□ -0.9
ARFGEF3-201ENST00000251691 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
ARFGEF3-201ENST00000251691 GBP4Q96PP9 640 aa9.42□□□□□ -0.9
ARFGEF3-201ENST00000251691 FRAT1Q92837 279 aaPredicted RBP9.41□□□□□ -0.9
ARFGEF3-201ENST00000251691 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
ARFGEF3-201ENST00000251691 FAM13BQ9NYF5 915 aa9.4□□□□□ -0.9
ARFGEF3-201ENST00000251691 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
ARFGEF3-201ENST00000251691 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
ARFGEF3-201ENST00000251691 PTMSP20962 102 aa9.39□□□□□ -0.91
ARFGEF3-201ENST00000251691 NRDCO43847 1150 aa9.38□□□□□ -0.91
ARFGEF3-201ENST00000251691 RRP7BPQ9NSQ0 103 aa9.37□□□□□ -0.91
ARFGEF3-201ENST00000251691 ZNF771Q7L3S4 317 aaPredicted RBP9.36□□□□□ -0.91
ARFGEF3-201ENST00000251691 RCAN3Q9UKA8 241 aa9.36□□□□□ -0.91
ARFGEF3-201ENST00000251691 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
ARFGEF3-201ENST00000251691 BRPF3Q9ULD4 1205 aa9.35□□□□□ -0.91
ARFGEF3-201ENST00000251691 GOLGA6L4A6NEF3 574 aa9.35□□□□□ -0.91
ARFGEF3-201ENST00000251691 KNSTRNQ9Y448 316 aa9.35□□□□□ -0.91
ARFGEF3-201ENST00000251691 CHGAP10645 457 aaKnown RBP9.34□□□□□ -0.91
ARFGEF3-201ENST00000251691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.34□□□□□ -0.91
ARFGEF3-201ENST00000251691 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
ARFGEF3-201ENST00000251691 PDE4AP27815 886 aa9.33□□□□□ -0.92
ARFGEF3-201ENST00000251691 CLIP1P30622 1438 aa9.32□□□□□ -0.92
ARFGEF3-201ENST00000251691 CEP162Q5TB80 1403 aa9.32□□□□□ -0.92
ARFGEF3-201ENST00000251691 FAM43AQ8N2R8 423 aa9.31□□□□□ -0.92
ARFGEF3-201ENST00000251691 CALD1Q05682 793 aaKnown RBP9.3□□□□□ -0.92
ARFGEF3-201ENST00000251691 CARD11Q9BXL7 1154 aa9.3□□□□□ -0.92
ARFGEF3-201ENST00000251691 SYAP1Q96A49 352 aaPredicted RBP9.3□□□□□ -0.92
ARFGEF3-201ENST00000251691 MFAP1P55081 439 aaKnown RBP9.29□□□□□ -0.92
ARFGEF3-201ENST00000251691 FOXD4L1Q9NU39 408 aa9.29□□□□□ -0.92
ARFGEF3-201ENST00000251691 DDX11L8A8MPP1 907 aa9.29□□□□□ -0.92
ARFGEF3-201ENST00000251691 TAOK2Q9UL54 1235 aa9.28□□□□□ -0.92
ARFGEF3-201ENST00000251691 PABPN1Q86U42 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
ARFGEF3-201ENST00000251691 GOLGA6L1Q8N7Z2 621 aa9.28□□□□□ -0.92
ARFGEF3-201ENST00000251691 FBLN2P98095 1184 aa9.27□□□□□ -0.92
ARFGEF3-201ENST00000251691 MS4A1P11836 297 aa9.27□□□□□ -0.92
ARFGEF3-201ENST00000251691 NUDCQ9Y266 331 aa9.27□□□□□ -0.92
ARFGEF3-201ENST00000251691 APPP05067 770 aa9.27□□□□□ -0.93
ARFGEF3-201ENST00000251691 CFAP53Q96M91 514 aa9.26□□□□□ -0.93
ARFGEF3-201ENST00000251691 RGL3Q3MIN7 710 aa9.26□□□□□ -0.93
ARFGEF3-201ENST00000251691 NFKBIBQ15653 356 aa9.26□□□□□ -0.93
ARFGEF3-201ENST00000251691 HSPA5P11021 654 aaKnown RBP9.26□□□□□ -0.93
ARFGEF3-201ENST00000251691 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.26□□□□□ -0.93
ARFGEF3-201ENST00000251691 FGD1P98174 961 aa9.26□□□□□ -0.93
ARFGEF3-201ENST00000251691 UBE2Q2Q8WVN8 375 aa9.25□□□□□ -0.93
ARFGEF3-201ENST00000251691 CHMP4BQ9H444 224 aaKnown RBP9.25□□□□□ -0.93
ARFGEF3-201ENST00000251691 RWDD1Q9H446 243 aaPredicted RBP9.25□□□□□ -0.93
ARFGEF3-201ENST00000251691 KCNJ4P48050 445 aa9.25□□□□□ -0.93
ARFGEF3-201ENST00000251691 MCCP23508 829 aa9.25□□□□□ -0.93
ARFGEF3-201ENST00000251691 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
ARFGEF3-201ENST00000251691 SETQ01105 290 aaPredicted RBP9.24□□□□□ -0.93
ARFGEF3-201ENST00000251691 NAP1L2Q9ULW6 460 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms