RNA–Protein interactions for RNA: ENST00000251691.4

ARFGEF3-201, Transcript of ARFGEF family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF3, Length 14,877 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3-201ENST00000251691 PELP1Q8IZL8 1130 aaKnown RBP12.02□□□□□ -0.49
ARFGEF3-201ENST00000251691 MYT1Q01538 1121 aa11.93□□□□□ -0.5
ARFGEF3-201ENST00000251691 DCAF8L2P0C7V8 631 aa11.77□□□□□ -0.53
ARFGEF3-201ENST00000251691 SUPT5HO00267 1087 aaKnown RBP11.74□□□□□ -0.53
ARFGEF3-201ENST00000251691 PCGF6Q9BYE7 350 aa11.65□□□□□ -0.54
ARFGEF3-201ENST00000251691 CENPBP07199 599 aaPredicted RBP11.57□□□□□ -0.56
ARFGEF3-201ENST00000251691 ERICH6Q7L0X2 663 aa11.53□□□□□ -0.56
ARFGEF3-201ENST00000251691 EHMT2Q96KQ7 1210 aa11.48□□□□□ -0.57
ARFGEF3-201ENST00000251691 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
ARFGEF3-201ENST00000251691 CCER1Q8TC90 406 aaPredicted RBP11.36□□□□□ -0.59
ARFGEF3-201ENST00000251691 SHROOM4Q9ULL8 1493 aa11.3□□□□□ -0.6
ARFGEF3-201ENST00000251691 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
ARFGEF3-201ENST00000251691 HRCP23327 699 aa11.25□□□□□ -0.61
ARFGEF3-201ENST00000251691 TTBK1Q5TCY1 1321 aaPredicted RBP11.18□□□□□ -0.62
ARFGEF3-201ENST00000251691 NEFLP07196 543 aa11.13□□□□□ -0.63
ARFGEF3-201ENST00000251691 FAM9AQ8IZU1 332 aaPredicted RBP11.1□□□□□ -0.63
ARFGEF3-201ENST00000251691 APLP2Q06481 763 aa11.09□□□□□ -0.63
ARFGEF3-201ENST00000251691 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
ARFGEF3-201ENST00000251691 TRIM26Q12899 539 aaPredicted RBP10.95□□□□□ -0.66
ARFGEF3-201ENST00000251691 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
ARFGEF3-201ENST00000251691 DAXXQ9UER7 740 aaPredicted RBP10.85□□□□□ -0.67
ARFGEF3-201ENST00000251691 DIEXFQ68CQ4 756 aaKnown RBP10.81□□□□□ -0.68
ARFGEF3-201ENST00000251691 RTL5Q5HYW3 569 aaPredicted RBP10.8□□□□□ -0.68
ARFGEF3-201ENST00000251691 TRIM41Q8WV44 630 aa10.77□□□□□ -0.69
ARFGEF3-201ENST00000251691 RANGAP1P46060 587 aaPredicted RBP10.76□□□□□ -0.69
ARFGEF3-201ENST00000251691 NISCHQ9Y2I1 1504 aa10.76□□□□□ -0.69
ARFGEF3-201ENST00000251691 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
ARFGEF3-201ENST00000251691 LOC105371045A0A1W2PR82 267 aa10.69□□□□□ -0.7
ARFGEF3-201ENST00000251691 BCANQ96GW7 911 aa10.67□□□□□ -0.7
ARFGEF3-201ENST00000251691 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
ARFGEF3-201ENST00000251691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
ARFGEF3-201ENST00000251691 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
ARFGEF3-201ENST00000251691 EIF5BO60841 1220 aaKnown RBP10.6□□□□□ -0.71
ARFGEF3-201ENST00000251691 SCAF1Q9H7N4 1312 aaKnown RBP10.56□□□□□ -0.72
ARFGEF3-201ENST00000251691 ATP1B4Q9UN42 357 aaPredicted RBP10.56□□□□□ -0.72
ARFGEF3-201ENST00000251691 CDK11AQ9UQ88 783 aaPredicted RBP10.55□□□□□ -0.72
ARFGEF3-201ENST00000251691 HNRNPUL2Q1KMD3 747 aaKnown RBP10.51□□□□□ -0.73
ARFGEF3-201ENST00000251691 CHIC1Q5VXU3 224 aa10.51□□□□□ -0.73
ARFGEF3-201ENST00000251691 CNGB1Q14028 1251 aaPredicted RBP10.47□□□□□ -0.73
ARFGEF3-201ENST00000251691 POLR3GLQ9BT43 218 aa10.46□□□□□ -0.74
ARFGEF3-201ENST00000251691 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
ARFGEF3-201ENST00000251691 CLSPNQ9HAW4 1339 aa10.44□□□□□ -0.74
ARFGEF3-201ENST00000251691 ITGAEP38570 1179 aa10.43□□□□□ -0.74
ARFGEF3-201ENST00000251691 GLIPR1L2Q4G1C9 344 aa10.43□□□□□ -0.74
ARFGEF3-201ENST00000251691 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
ARFGEF3-201ENST00000251691 ANP32AP39687 249 aaKnown RBP10.36□□□□□ -0.75
ARFGEF3-201ENST00000251691 NBR1Q14596 966 aa10.35□□□□□ -0.75
ARFGEF3-201ENST00000251691 BCL11AQ9H165 835 aa10.35□□□□□ -0.75
ARFGEF3-201ENST00000251691 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
ARFGEF3-201ENST00000251691 FKBP8Q14318 412 aa10.32□□□□□ -0.76
ARFGEF3-201ENST00000251691 NPM2Q86SE8 214 aaKnown RBP10.29□□□□□ -0.76
ARFGEF3-201ENST00000251691 ANP32CO43423 234 aa10.29□□□□□ -0.76
ARFGEF3-201ENST00000251691 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
ARFGEF3-201ENST00000251691 ANP32BQ92688 251 aaKnown RBP10.14□□□□□ -0.79
ARFGEF3-201ENST00000251691 RTN4Q9NQC3 1192 aaKnown RBP10.13□□□□□ -0.79
ARFGEF3-201ENST00000251691 MIER1Q8N108 512 aa10.12□□□□□ -0.79
ARFGEF3-201ENST00000251691 ARXQ96QS3 562 aa10.11□□□□□ -0.79
ARFGEF3-201ENST00000251691 FAM50AQ14320 339 aaKnown RBP10.07□□□□□ -0.8
ARFGEF3-201ENST00000251691 SLC4A1APQ9BWU0 796 aaKnown RBP10.06□□□□□ -0.8
ARFGEF3-201ENST00000251691 TRIM52Q96A61 297 aa10.04□□□□□ -0.8
ARFGEF3-201ENST00000251691 IRX6P78412 446 aaPredicted RBP10.04□□□□□ -0.8
ARFGEF3-201ENST00000251691 HNRNPUQ00839 825 aaKnown RBP eCLIP10.03□□□□□ -0.8
ARFGEF3-201ENST00000251691 CANXP27824 592 aaKnown RBP10.01□□□□□ -0.81
ARFGEF3-201ENST00000251691 CCDC136Q96JN2 1154 aa10.01□□□□□ -0.81
ARFGEF3-201ENST00000251691 DEKP35659 375 aaKnown RBP10.01□□□□□ -0.81
ARFGEF3-201ENST00000251691 DDX10Q13206 875 aaKnown RBP10□□□□□ -0.81
ARFGEF3-201ENST00000251691 CSRNP3Q8WYN3 585 aa9.99□□□□□ -0.81
ARFGEF3-201ENST00000251691 NEFMP07197 916 aa9.99□□□□□ -0.81
ARFGEF3-201ENST00000251691 TNNT2P45379 298 aaPredicted RBP9.99□□□□□ -0.81
ARFGEF3-201ENST00000251691 HSP90AA1P07900 732 aaKnown RBP9.98□□□□□ -0.81
ARFGEF3-201ENST00000251691 ERICH6BQ5W0A0 696 aa9.97□□□□□ -0.81
ARFGEF3-201ENST00000251691 NAP1L5Q96NT1 182 aaPredicted RBP9.96□□□□□ -0.81
ARFGEF3-201ENST00000251691 ZNF326Q5BKZ1 582 aaKnown RBP9.96□□□□□ -0.82
ARFGEF3-201ENST00000251691 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.95□□□□□ -0.82
ARFGEF3-201ENST00000251691 UPF2Q9HAU5 1272 aaKnown RBP9.95□□□□□ -0.82
ARFGEF3-201ENST00000251691 SUPT16HQ9Y5B9 1047 aaKnown RBP9.95□□□□□ -0.82
ARFGEF3-201ENST00000251691 FAM9BQ8IZU0 186 aa9.95□□□□□ -0.82
ARFGEF3-201ENST00000251691 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
ARFGEF3-201ENST00000251691 NOP58Q9Y2X3 529 aaKnown RBP9.92□□□□□ -0.82
ARFGEF3-201ENST00000251691 TRIM44Q96DX7 344 aaPredicted RBP9.91□□□□□ -0.82
ARFGEF3-201ENST00000251691 LAS1LQ9Y4W2 734 aaKnown RBP9.91□□□□□ -0.82
ARFGEF3-201ENST00000251691 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
ARFGEF3-201ENST00000251691 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
ARFGEF3-201ENST00000251691 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
ARFGEF3-201ENST00000251691 PPM1GO15355 546 aaPredicted RBP9.85□□□□□ -0.83
ARFGEF3-201ENST00000251691 BECN1Q14457 450 aa9.82□□□□□ -0.84
ARFGEF3-201ENST00000251691 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
ARFGEF3-201ENST00000251691 TSHZ2Q9NRE2 1034 aa9.81□□□□□ -0.84
ARFGEF3-201ENST00000251691 CDK11BP21127 795 aaKnown RBP9.8□□□□□ -0.84
ARFGEF3-201ENST00000251691 MRS2Q9HD23 443 aa9.79□□□□□ -0.84
ARFGEF3-201ENST00000251691 TMC1Q8TDI8 760 aa9.77□□□□□ -0.84
ARFGEF3-201ENST00000251691 ARID4BQ4LE39 1312 aaPredicted RBP9.77□□□□□ -0.84
ARFGEF3-201ENST00000251691 HIRIP3Q9BW71 556 aaPredicted RBP9.77□□□□□ -0.84
ARFGEF3-201ENST00000251691 PPP4R2Q9NY27 417 aa9.77□□□□□ -0.85
ARFGEF3-201ENST00000251691 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.77□□□□□ -0.85
ARFGEF3-201ENST00000251691 DNTTIP2Q5QJE6 756 aaKnown RBP9.75□□□□□ -0.85
ARFGEF3-201ENST00000251691 PTMAP06454 111 aaKnown RBP9.75□□□□□ -0.85
ARFGEF3-201ENST00000251691 NCLP19338 710 aaKnown RBP9.73□□□□□ -0.85
ARFGEF3-201ENST00000251691 B4GALNT3Q6L9W6 998 aa9.73□□□□□ -0.85
ARFGEF3-201ENST00000251691 TONSLQ96HA7 1378 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms