RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 SIN3AQ96ST3 1273 aa18.52■□□□□ 0.55
CCDC117-201ENST00000249064 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCDC117-201ENST00000249064 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
CCDC117-201ENST00000249064 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
CCDC117-201ENST00000249064 ANO8Q9HCE9 1232 aaPredicted RBP18.46■□□□□ 0.55
CCDC117-201ENST00000249064 DAXXQ9UER7 740 aaPredicted RBP18.45■□□□□ 0.54
CCDC117-201ENST00000249064 SENP3-EIF4A1A0A087X0R7 540 aa18.42■□□□□ 0.54
CCDC117-201ENST00000249064 SYNJ1O43426 1573 aa18.41■□□□□ 0.54
CCDC117-201ENST00000249064 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
CCDC117-201ENST00000249064 ANP32AP39687 249 aaKnown RBP18.4■□□□□ 0.54
CCDC117-201ENST00000249064 CHIC2Q9UKJ5 165 aa18.39■□□□□ 0.53
CCDC117-201ENST00000249064 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
CCDC117-201ENST00000249064 DHX57Q6P158 1386 aaKnown RBP18.33■□□□□ 0.52
CCDC117-201ENST00000249064 ZBTB47Q9UFB7 747 aaPredicted RBP18.32■□□□□ 0.52
CCDC117-201ENST00000249064 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
CCDC117-201ENST00000249064 CUX2O14529 1486 aa18.32■□□□□ 0.52
CCDC117-201ENST00000249064 FAM9BQ8IZU0 186 aa18.3■□□□□ 0.52
CCDC117-201ENST00000249064 B4GALNT3Q6L9W6 998 aa18.29■□□□□ 0.52
CCDC117-201ENST00000249064 KIF21BO75037 1637 aa18.27■□□□□ 0.52
CCDC117-201ENST00000249064 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.51
CCDC117-201ENST00000249064 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
CCDC117-201ENST00000249064 CARMIL1Q5VZK9 1371 aa18.25■□□□□ 0.51
CCDC117-201ENST00000249064 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
CCDC117-201ENST00000249064 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
CCDC117-201ENST00000249064 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
CCDC117-201ENST00000249064 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
CCDC117-201ENST00000249064 NOP58Q9Y2X3 529 aaKnown RBP18.22■□□□□ 0.51
CCDC117-201ENST00000249064 ARXQ96QS3 562 aa18.21■□□□□ 0.51
CCDC117-201ENST00000249064 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
CCDC117-201ENST00000249064 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
CCDC117-201ENST00000249064 MSH5O43196 834 aa18.17■□□□□ 0.5
CCDC117-201ENST00000249064 FBLN2P98095 1184 aa18.16■□□□□ 0.5
CCDC117-201ENST00000249064 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
CCDC117-201ENST00000249064 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
CCDC117-201ENST00000249064 SETD5Q9C0A6 1442 aa18.1■□□□□ 0.49
CCDC117-201ENST00000249064 NEFMP07197 916 aa18.1■□□□□ 0.49
CCDC117-201ENST00000249064 FHOD3Q2V2M9 1422 aa18.09■□□□□ 0.49
CCDC117-201ENST00000249064 IGF1RP08069 1367 aa18.07■□□□□ 0.48
CCDC117-201ENST00000249064 IL27Q8NEV9 243 aa18.07■□□□□ 0.48
CCDC117-201ENST00000249064 FOXD1Q16676 465 aa18.06■□□□□ 0.48
CCDC117-201ENST00000249064 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
CCDC117-201ENST00000249064 PRXQ9BXM0 1461 aa18.03■□□□□ 0.48
CCDC117-201ENST00000249064 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
CCDC117-201ENST00000249064 PPP4R2Q9NY27 417 aa18.02■□□□□ 0.47
CCDC117-201ENST00000249064 PHLDB1Q86UU1 1377 aa18.02■□□□□ 0.47
CCDC117-201ENST00000249064 CUX1P39880 1505 aa18.01■□□□□ 0.47
CCDC117-201ENST00000249064 MRS2Q9HD23 443 aa18■□□□□ 0.47
CCDC117-201ENST00000249064 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
CCDC117-201ENST00000249064 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
CCDC117-201ENST00000249064 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
CCDC117-201ENST00000249064 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
CCDC117-201ENST00000249064 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
CCDC117-201ENST00000249064 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
CCDC117-201ENST00000249064 TIMELESSQ9UNS1 1208 aa17.93■□□□□ 0.46
CCDC117-201ENST00000249064 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
CCDC117-201ENST00000249064 FANCIQ9NVI1 1328 aa17.93■□□□□ 0.46
CCDC117-201ENST00000249064 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
CCDC117-201ENST00000249064 GLIPR1L2Q4G1C9 344 aa17.91■□□□□ 0.46
CCDC117-201ENST00000249064 RRBP1Q9P2E9 1410 aaKnown RBP17.9■□□□□ 0.46
CCDC117-201ENST00000249064 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCDC117-201ENST00000249064 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
CCDC117-201ENST00000249064 KDM2AQ9Y2K7 1162 aa17.88■□□□□ 0.45
CCDC117-201ENST00000249064 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
CCDC117-201ENST00000249064 ERICH3Q5RHP9 1530 aa17.86■□□□□ 0.45
CCDC117-201ENST00000249064 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
CCDC117-201ENST00000249064 CFTRP13569 1480 aa17.86■□□□□ 0.45
CCDC117-201ENST00000249064 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
CCDC117-201ENST00000249064 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.44
CCDC117-201ENST00000249064 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
CCDC117-201ENST00000249064 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
CCDC117-201ENST00000249064 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
CCDC117-201ENST00000249064 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
CCDC117-201ENST00000249064 NESP48681 1621 aa17.78■□□□□ 0.44
CCDC117-201ENST00000249064 WDR97A6NE52 1622 aa17.77■□□□□ 0.43
CCDC117-201ENST00000249064 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.43
CCDC117-201ENST00000249064 NAP1L5Q96NT1 182 aaPredicted RBP17.75■□□□□ 0.43
CCDC117-201ENST00000249064 CCER2I3L3R5 266 aa17.75■□□□□ 0.43
CCDC117-201ENST00000249064 MPHOSPH9Q99550 1183 aa17.74■□□□□ 0.43
CCDC117-201ENST00000249064 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
CCDC117-201ENST00000249064 BRPF3Q9ULD4 1205 aa17.74■□□□□ 0.43
CCDC117-201ENST00000249064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.435e-6■□□□□ 8.1
CCDC117-201ENST00000249064 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
CCDC117-201ENST00000249064 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
CCDC117-201ENST00000249064 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
CCDC117-201ENST00000249064 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
CCDC117-201ENST00000249064 VSIG10Q8N0Z9 540 aa17.71■□□□□ 0.42
CCDC117-201ENST00000249064 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.42
CCDC117-201ENST00000249064 CCDC18Q5T9S5 1454 aa17.7■□□□□ 0.42
CCDC117-201ENST00000249064 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
CCDC117-201ENST00000249064 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
CCDC117-201ENST00000249064 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
CCDC117-201ENST00000249064 TMC1Q8TDI8 760 aa17.68■□□□□ 0.42
CCDC117-201ENST00000249064 MAPKBP1O60336 1514 aa17.68■□□□□ 0.42
CCDC117-201ENST00000249064 ZNF644Q9H582 1327 aaPredicted RBP17.68■□□□□ 0.42
CCDC117-201ENST00000249064 FGD6Q6ZV73 1430 aa17.68■□□□□ 0.42
CCDC117-201ENST00000249064 CCDC184Q52MB2 194 aa17.65■□□□□ 0.42
CCDC117-201ENST00000249064 WASHC2AQ641Q2 1341 aa17.6■□□□□ 0.41
CCDC117-201ENST00000249064 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
CCDC117-201ENST00000249064 TSPY4P0CV99 314 aa17.59■□□□□ 0.41
CCDC117-201ENST00000249064 TSPY10P0CW01 314 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms