RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 SCAF1Q9H7N4 1312 aaKnown RBP25.73■■□□□ 1.71
LRFN3-201ENST00000246529 LRRC9Q6ZRR7 1453 aa25.71■■□□□ 1.71
LRFN3-201ENST00000246529 MAP3K1Q13233 1512 aa25.71■■□□□ 1.71
LRFN3-201ENST00000246529 PCF11O94913 1555 aaKnown RBP25.7■■□□□ 1.71
LRFN3-201ENST00000246529 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.71
LRFN3-201ENST00000246529 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
LRFN3-201ENST00000246529 CUL7Q14999 1698 aa25.69■■□□□ 1.7
LRFN3-201ENST00000246529 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
LRFN3-201ENST00000246529 PHLDB1Q86UU1 1377 aa25.66■■□□□ 1.7
LRFN3-201ENST00000246529 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
LRFN3-201ENST00000246529 KIF21AQ7Z4S6 1674 aa25.62■■□□□ 1.69
LRFN3-201ENST00000246529 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
LRFN3-201ENST00000246529 ABCA5Q8WWZ7 1642 aa25.61■■□□□ 1.69
LRFN3-201ENST00000246529 NEUROD1Q13562 356 aa25.6■■□□□ 1.69
LRFN3-201ENST00000246529 EFCAB5A4FU69 1503 aa25.59■■□□□ 1.69
LRFN3-201ENST00000246529 CTTNBP2Q8WZ74 1663 aa25.59■■□□□ 1.69
LRFN3-201ENST00000246529 CFAP43Q8NDM7 1665 aa25.58■■□□□ 1.69
LRFN3-201ENST00000246529 FAM50AQ14320 339 aaKnown RBP25.57■■□□□ 1.68
LRFN3-201ENST00000246529 ACIN1Q9UKV3 1341 aaKnown RBP25.56■■□□□ 1.68
LRFN3-201ENST00000246529 RAB3GAP2Q9H2M9 1393 aa25.55■■□□□ 1.68
LRFN3-201ENST00000246529 FYCO1Q9BQS8 1478 aa25.55■■□□□ 1.68
LRFN3-201ENST00000246529 CASKIN1Q8WXD9 1431 aa25.54■■□□□ 1.68
LRFN3-201ENST00000246529 MIER1Q8N108 512 aa25.51■■□□□ 1.67
LRFN3-201ENST00000246529 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.67
LRFN3-201ENST00000246529 TARBP1Q13395 1621 aaKnown RBP25.47■■□□□ 1.67
LRFN3-201ENST00000246529 FMN1Q68DA7 1419 aa25.46■■□□□ 1.67
LRFN3-201ENST00000246529 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
LRFN3-201ENST00000246529 SETD5Q9C0A6 1442 aa25.44■■□□□ 1.66
LRFN3-201ENST00000246529 CENPBP07199 599 aaPredicted RBP25.43■■□□□ 1.66
LRFN3-201ENST00000246529 YTHDC1Q96MU7 727 aaKnown RBP25.41■■□□□ 1.66
LRFN3-201ENST00000246529 SAMD9Q5K651 1589 aa25.41■■□□□ 1.66
LRFN3-201ENST00000246529 MAPKBP1O60336 1514 aa25.39■■□□□ 1.65
LRFN3-201ENST00000246529 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
LRFN3-201ENST00000246529 MRC2Q9UBG0 1479 aa25.33■■□□□ 1.65
LRFN3-201ENST00000246529 GRIN2BQ13224 1484 aa25.31■■□□□ 1.64
LRFN3-201ENST00000246529 LRRIQ1Q96JM4 1722 aa25.3■■□□□ 1.64
LRFN3-201ENST00000246529 FGD6Q6ZV73 1430 aa25.3■■□□□ 1.64
LRFN3-201ENST00000246529 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
LRFN3-201ENST00000246529 GTF3C3Q9Y5Q9 886 aa25.28■■□□□ 1.64
LRFN3-201ENST00000246529 SIN3AQ96ST3 1273 aa25.27■■□□□ 1.64
LRFN3-201ENST00000246529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.25■■□□□ 1.63
LRFN3-201ENST00000246529 ZNF608Q9ULD9 1512 aaPredicted RBP25.23■■□□□ 1.63
LRFN3-201ENST00000246529 ADAMTS12P58397 1594 aa25.23■■□□□ 1.63
LRFN3-201ENST00000246529 NCOA2Q15596 1464 aa25.22■■□□□ 1.63
LRFN3-201ENST00000246529 PTPRKQ15262 1439 aa25.2■■□□□ 1.62
LRFN3-201ENST00000246529 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
LRFN3-201ENST00000246529 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
LRFN3-201ENST00000246529 ARID3CA6NKF2 412 aa25.17■■□□□ 1.62
LRFN3-201ENST00000246529 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
LRFN3-201ENST00000246529 MYOM3Q5VTT5 1437 aa25.16■■□□□ 1.62
LRFN3-201ENST00000246529 IFT140Q96RY7 1462 aa25.14■■□□□ 1.61
LRFN3-201ENST00000246529 EHBP1L1Q8N3D4 1523 aa25.13■■□□□ 1.61
LRFN3-201ENST00000246529 SUPT6HQ7KZ85 1726 aaKnown RBP25.11■■□□□ 1.61
LRFN3-201ENST00000246529 WDR62O43379 1518 aa25.11■■□□□ 1.61
LRFN3-201ENST00000246529 CCDC18Q5T9S5 1454 aa25.08■■□□□ 1.61
LRFN3-201ENST00000246529 UGGT2Q9NYU1 1516 aa25.08■■□□□ 1.6
LRFN3-201ENST00000246529 CDK13Q14004 1512 aaKnown RBP25.06■■□□□ 1.6
LRFN3-201ENST00000246529 HFM1A2PYH4 1435 aa25.06■■□□□ 1.6
LRFN3-201ENST00000246529 EPRSP07814 1512 aaKnown RBP25.06■■□□□ 1.6
LRFN3-201ENST00000246529 HECW1Q76N89 1606 aa25.06■■□□□ 1.6
LRFN3-201ENST00000246529 ARHGEF11O15085 1522 aa25.05■■□□□ 1.6
LRFN3-201ENST00000246529 PTPN23Q9H3S7 1636 aa25.03■■□□□ 1.6
LRFN3-201ENST00000246529 NAIPQ13075 1403 aa25.02■■□□□ 1.6
LRFN3-201ENST00000246529 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
LRFN3-201ENST00000246529 CHIC2Q9UKJ5 165 aa25.01■■□□□ 1.59
LRFN3-201ENST00000246529 RRP7BPQ9NSQ0 103 aa24.99■■□□□ 1.59
LRFN3-201ENST00000246529 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
LRFN3-201ENST00000246529 KIAA0586Q9BVV6 1533 aa24.97■■□□□ 1.59
LRFN3-201ENST00000246529 UACAQ9BZF9 1416 aa24.97■■□□□ 1.59
LRFN3-201ENST00000246529 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
LRFN3-201ENST00000246529 PPP1R15AO75807 674 aaPredicted RBP24.95■■□□□ 1.58
LRFN3-201ENST00000246529 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
LRFN3-201ENST00000246529 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
LRFN3-201ENST00000246529 HIRIP3Q9BW71 556 aaPredicted RBP24.94■■□□□ 1.58
LRFN3-201ENST00000246529 TCOF1Q13428 1488 aaKnown RBP24.92■■□□□ 1.58
LRFN3-201ENST00000246529 KIAA0556O60303 1618 aa24.92■■□□□ 1.58
LRFN3-201ENST00000246529 FBLN2P98095 1184 aa24.88■■□□□ 1.57
LRFN3-201ENST00000246529 TONSLQ96HA7 1378 aa24.88■■□□□ 1.57
LRFN3-201ENST00000246529 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
LRFN3-201ENST00000246529 DDX10Q13206 875 aaKnown RBP24.87■■□□□ 1.57
LRFN3-201ENST00000246529 NUP153P49790 1475 aaKnown RBP24.86■■□□□ 1.57
LRFN3-201ENST00000246529 KCNH8Q96L42 1107 aa24.84■■□□□ 1.57
LRFN3-201ENST00000246529 MIA2Q96PC5 1412 aa24.83■■□□□ 1.57
LRFN3-201ENST00000246529 TRIM52Q96A61 297 aa24.82■■□□□ 1.56
LRFN3-201ENST00000246529 KDM6BO15054 1643 aa24.82■■□□□ 1.56
LRFN3-201ENST00000246529 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
LRFN3-201ENST00000246529 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
LRFN3-201ENST00000246529 ZNF644Q9H582 1327 aaPredicted RBP24.8■■□□□ 1.56
LRFN3-201ENST00000246529 RAPGEF6Q8TEU7 1601 aa24.79■■□□□ 1.56
LRFN3-201ENST00000246529 PELP1Q8IZL8 1130 aaKnown RBP24.79■■□□□ 1.56
LRFN3-201ENST00000246529 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
LRFN3-201ENST00000246529 DENND4BO75064 1496 aaPredicted RBP24.77■■□□□ 1.56
LRFN3-201ENST00000246529 GCC2Q8IWJ2 1684 aa24.76■■□□□ 1.55
LRFN3-201ENST00000246529 PLB1Q6P1J6 1458 aa24.75■■□□□ 1.55
LRFN3-201ENST00000246529 AKNAQ7Z591 1439 aa24.73■■□□□ 1.55
LRFN3-201ENST00000246529 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
LRFN3-201ENST00000246529 DAPK1P53355 1430 aa24.71■■□□□ 1.55
LRFN3-201ENST00000246529 CDK11AQ9UQ88 783 aaPredicted RBP24.71■■□□□ 1.55
LRFN3-201ENST00000246529 FOXD1Q16676 465 aa24.71■■□□□ 1.55
LRFN3-201ENST00000246529 JPH4Q96JJ6 628 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms