RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.62■■□□□ 1.21
PDE1B-201ENST00000243052 FANCIQ9NVI1 1328 aa22.52■■□□□ 1.2
PDE1B-201ENST00000243052 ANP32CO43423 234 aa22.5■■□□□ 1.19
PDE1B-201ENST00000243052 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
PDE1B-201ENST00000243052 RTL5Q5HYW3 569 aaPredicted RBP22.49■■□□□ 1.19
PDE1B-201ENST00000243052 HNRNPUQ00839 825 aaKnown RBP eCLIP22.47■■□□□ 1.19
PDE1B-201ENST00000243052 MYT1LQ9UL68 1186 aa22.47■■□□□ 1.19
PDE1B-201ENST00000243052 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
PDE1B-201ENST00000243052 CCNB3Q8WWL7 1395 aa22.46■■□□□ 1.19
PDE1B-201ENST00000243052 KIF27Q86VH2 1401 aa22.45■■□□□ 1.18
PDE1B-201ENST00000243052 IL27Q8NEV9 243 aa22.42■■□□□ 1.18
PDE1B-201ENST00000243052 EIF5BO60841 1220 aaKnown RBP22.4■■□□□ 1.18
PDE1B-201ENST00000243052 B4GALNT3Q6L9W6 998 aa22.39■■□□□ 1.17
PDE1B-201ENST00000243052 NOP58Q9Y2X3 529 aaKnown RBP22.38■■□□□ 1.17
PDE1B-201ENST00000243052 PAK3O75914 559 aaPredicted RBP22.37■■□□□ 1.17
PDE1B-201ENST00000243052 RAB3GAP2Q9H2M9 1393 aa22.37■■□□□ 1.17
PDE1B-201ENST00000243052 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
PDE1B-201ENST00000243052 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
PDE1B-201ENST00000243052 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
PDE1B-201ENST00000243052 CUX2O14529 1486 aa22.3■■□□□ 1.16
PDE1B-201ENST00000243052 CUX1P39880 1505 aa22.27■■□□□ 1.15
PDE1B-201ENST00000243052 ARHGAP35Q9NRY4 1499 aa22.26■■□□□ 1.15
PDE1B-201ENST00000243052 CNGB1Q14028 1251 aaPredicted RBP22.25■■□□□ 1.15
PDE1B-201ENST00000243052 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
PDE1B-201ENST00000243052 NPM2Q86SE8 214 aaKnown RBP22.22■■□□□ 1.15
PDE1B-201ENST00000243052 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
PDE1B-201ENST00000243052 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
PDE1B-201ENST00000243052 ANP32AP39687 249 aaKnown RBP22.19■■□□□ 1.14
PDE1B-201ENST00000243052 PPP4R2Q9NY27 417 aa22.18■■□□□ 1.14
PDE1B-201ENST00000243052 ZBTB47Q9UFB7 747 aaPredicted RBP22.18■■□□□ 1.14
PDE1B-201ENST00000243052 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
PDE1B-201ENST00000243052 IGF1RP08069 1367 aa22.16■■□□□ 1.14
PDE1B-201ENST00000243052 PHLDB1Q86UU1 1377 aa22.15■■□□□ 1.14
PDE1B-201ENST00000243052 SENP3-EIF4A1A0A087X0R7 540 aa22.15■■□□□ 1.14
PDE1B-201ENST00000243052 ARID3CA6NKF2 412 aa22.14■■□□□ 1.14
PDE1B-201ENST00000243052 CCER2I3L3R5 266 aa22.14■■□□□ 1.13
PDE1B-201ENST00000243052 PPP1R15AO75807 674 aaPredicted RBP22.14■■□□□ 1.13
PDE1B-201ENST00000243052 ERICH6BQ5W0A0 696 aa22.14■■□□□ 1.13
PDE1B-201ENST00000243052 LAS1LQ9Y4W2 734 aaKnown RBP22.13■■□□□ 1.13
PDE1B-201ENST00000243052 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
PDE1B-201ENST00000243052 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.12
PDE1B-201ENST00000243052 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
PDE1B-201ENST00000243052 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
PDE1B-201ENST00000243052 CHIC2Q9UKJ5 165 aa22.06■■□□□ 1.12
PDE1B-201ENST00000243052 NCAPD3P42695 1498 aa22.06■■□□□ 1.12
PDE1B-201ENST00000243052 CFTRP13569 1480 aa22.02■■□□□ 1.12
PDE1B-201ENST00000243052 NEFMP07197 916 aa22.02■■□□□ 1.11
PDE1B-201ENST00000243052 WDR97A6NE52 1622 aa22.01■■□□□ 1.11
PDE1B-201ENST00000243052 LRRC9Q6ZRR7 1453 aa21.99■■□□□ 1.11
PDE1B-201ENST00000243052 IPO9Q96P70 1041 aaKnown RBP21.99■■□□□ 1.11
PDE1B-201ENST00000243052 RRP7BPQ9NSQ0 103 aa21.99■■□□□ 1.11
PDE1B-201ENST00000243052 MAPKBP1O60336 1514 aa21.98■■□□□ 1.11
PDE1B-201ENST00000243052 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
PDE1B-201ENST00000243052 UBE2Q2Q8WVN8 375 aa21.97■■□□□ 1.11
PDE1B-201ENST00000243052 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
PDE1B-201ENST00000243052 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
PDE1B-201ENST00000243052 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
PDE1B-201ENST00000243052 TIAM1Q13009 1591 aa21.93■■□□□ 1.1
PDE1B-201ENST00000243052 BRPF3Q9ULD4 1205 aa21.92■■□□□ 1.1
PDE1B-201ENST00000243052 RAD54L2Q9Y4B4 1467 aa21.91■■□□□ 1.1
PDE1B-201ENST00000243052 POLR3GLQ9BT43 218 aa21.9■■□□□ 1.1
PDE1B-201ENST00000243052 TIMELESSQ9UNS1 1208 aa21.89■■□□□ 1.1
PDE1B-201ENST00000243052 HMGXB3Q12766 1538 aa21.87■■□□□ 1.09
PDE1B-201ENST00000243052 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
PDE1B-201ENST00000243052 MRS2Q9HD23 443 aa21.86■■□□□ 1.09
PDE1B-201ENST00000243052 FOXD1Q16676 465 aa21.84■■□□□ 1.09
PDE1B-201ENST00000243052 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
PDE1B-201ENST00000243052 PCF11O94913 1555 aaKnown RBP21.78■■□□□ 1.08
PDE1B-201ENST00000243052 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
PDE1B-201ENST00000243052 HSPA5P11021 654 aaKnown RBP21.74■■□□□ 1.07
PDE1B-201ENST00000243052 ZNF326Q5BKZ1 582 aaKnown RBP21.74■■□□□ 1.07
PDE1B-201ENST00000243052 CCDC18Q5T9S5 1454 aa21.72■■□□□ 1.07
PDE1B-201ENST00000243052 FGD6Q6ZV73 1430 aa21.71■■□□□ 1.07
PDE1B-201ENST00000243052 NESP48681 1621 aa21.69■■□□□ 1.06
PDE1B-201ENST00000243052 EIF4G2P78344 907 aaKnown RBP eCLIP21.67■■□□□ 1.06
PDE1B-201ENST00000243052 PKNOX2Q96KN3 472 aa21.67■■□□□ 1.06
PDE1B-201ENST00000243052 DAXXQ9UER7 740 aaPredicted RBP21.67■■□□□ 1.06
PDE1B-201ENST00000243052 PTPRKQ15262 1439 aa21.66■■□□□ 1.06
PDE1B-201ENST00000243052 SLC4A3P48751 1232 aa21.64■■□□□ 1.06
PDE1B-201ENST00000243052 CASKIN1Q8WXD9 1431 aa21.64■■□□□ 1.05
PDE1B-201ENST00000243052 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
PDE1B-201ENST00000243052 MAP3K1Q13233 1512 aa21.63■■□□□ 1.05
PDE1B-201ENST00000243052 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
PDE1B-201ENST00000243052 WASHC2AQ641Q2 1341 aa21.61■■□□□ 1.05
PDE1B-201ENST00000243052 L3MBTL2Q969R5 705 aa21.61■■□□□ 1.05
PDE1B-201ENST00000243052 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
PDE1B-201ENST00000243052 FYCO1Q9BQS8 1478 aa21.6■■□□□ 1.05
PDE1B-201ENST00000243052 ARXQ96QS3 562 aa21.6■■□□□ 1.05
PDE1B-201ENST00000243052 GSE1Q14687 1217 aa21.59■■□□□ 1.05
PDE1B-201ENST00000243052 PPM1GO15355 546 aaPredicted RBP21.58■■□□□ 1.05
PDE1B-201ENST00000243052 UACAQ9BZF9 1416 aa21.58■■□□□ 1.05
PDE1B-201ENST00000243052 ZNF777Q9ULD5 760 aaPredicted RBP21.57■■□□□ 1.04
PDE1B-201ENST00000243052 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.04
PDE1B-201ENST00000243052 MPHOSPH9Q99550 1183 aa21.57■■□□□ 1.04
PDE1B-201ENST00000243052 NCOA2Q15596 1464 aa21.55■■□□□ 1.04
PDE1B-201ENST00000243052 FRAT1Q92837 279 aaPredicted RBP21.54■■□□□ 1.04
PDE1B-201ENST00000243052 ZBED9Q6R2W3 1325 aa21.54■■□□□ 1.04
PDE1B-201ENST00000243052 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
PDE1B-201ENST00000243052 NAIPQ13075 1403 aa21.53■■□□□ 1.04
PDE1B-201ENST00000243052 SLC4A1APQ9BWU0 796 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms