RNA–Protein interactions for RNA: ENST00000242719.3

RNF11-201, Transcript of ring finger protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF11, Length 3,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11-201ENST00000242719 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
RNF11-201ENST00000242719 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
RNF11-201ENST00000242719 RRBP1Q9P2E9 1410 aaKnown RBP21.92■■□□□ 1.1
RNF11-201ENST00000242719 RBM19Q9Y4C8 960 aaKnown RBP21.91■■□□□ 1.1
RNF11-201ENST00000242719 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.09
RNF11-201ENST00000242719 CUX1P39880 1505 aa21.87■■□□□ 1.09
RNF11-201ENST00000242719 NEFLP07196 543 aa21.86■■□□□ 1.09
RNF11-201ENST00000242719 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
RNF11-201ENST00000242719 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
RNF11-201ENST00000242719 IRX6P78412 446 aaPredicted RBP21.79■■□□□ 1.08
RNF11-201ENST00000242719 CUX2O14529 1486 aa21.78■■□□□ 1.08
RNF11-201ENST00000242719 PHLDB1Q86UU1 1377 aa21.78■■□□□ 1.08
RNF11-201ENST00000242719 MAPKBP1O60336 1514 aa21.78■■□□□ 1.08
RNF11-201ENST00000242719 SETD5Q9C0A6 1442 aa21.78■■□□□ 1.08
RNF11-201ENST00000242719 ANP32CO43423 234 aa21.77■■□□□ 1.08
RNF11-201ENST00000242719 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
RNF11-201ENST00000242719 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
RNF11-201ENST00000242719 MSH5O43196 834 aa21.74■■□□□ 1.07
RNF11-201ENST00000242719 PPP1R15AO75807 674 aaPredicted RBP21.68■■□□□ 1.06
RNF11-201ENST00000242719 IGF1RP08069 1367 aa21.68■■□□□ 1.06
RNF11-201ENST00000242719 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
RNF11-201ENST00000242719 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
RNF11-201ENST00000242719 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
RNF11-201ENST00000242719 LRRC9Q6ZRR7 1453 aa21.62■■□□□ 1.05
RNF11-201ENST00000242719 HNRNPUQ00839 825 aaKnown RBP eCLIP21.62■■□□□ 1.05
RNF11-201ENST00000242719 TONSLQ96HA7 1378 aa21.62■■□□□ 1.05
RNF11-201ENST00000242719 FHOD3Q2V2M9 1422 aa21.61■■□□□ 1.05
RNF11-201ENST00000242719 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
RNF11-201ENST00000242719 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
RNF11-201ENST00000242719 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
RNF11-201ENST00000242719 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
RNF11-201ENST00000242719 CHIC2Q9UKJ5 165 aa21.54■■□□□ 1.04
RNF11-201ENST00000242719 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
RNF11-201ENST00000242719 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
RNF11-201ENST00000242719 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
RNF11-201ENST00000242719 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
RNF11-201ENST00000242719 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
RNF11-201ENST00000242719 CCER2I3L3R5 266 aa21.48■■□□□ 1.03
RNF11-201ENST00000242719 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
RNF11-201ENST00000242719 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
RNF11-201ENST00000242719 PCF11O94913 1555 aaKnown RBP21.47■■□□□ 1.03
RNF11-201ENST00000242719 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
RNF11-201ENST00000242719 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
RNF11-201ENST00000242719 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
RNF11-201ENST00000242719 CDK11AQ9UQ88 783 aaPredicted RBP21.44■■□□□ 1.02
RNF11-201ENST00000242719 MTUS2Q5JR59 1369 aa21.44■■□□□ 1.02
RNF11-201ENST00000242719 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
RNF11-201ENST00000242719 FAM9BQ8IZU0 186 aa21.42■■□□□ 1.02
RNF11-201ENST00000242719 FOXD1Q16676 465 aa21.4■■□□□ 1.02
RNF11-201ENST00000242719 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
RNF11-201ENST00000242719 CCDC184Q52MB2 194 aa21.38■■□□□ 1.01
RNF11-201ENST00000242719 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
RNF11-201ENST00000242719 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
RNF11-201ENST00000242719 POLR3GLQ9BT43 218 aa21.37■■□□□ 1.01
RNF11-201ENST00000242719 FANCIQ9NVI1 1328 aa21.37■■□□□ 1.01
RNF11-201ENST00000242719 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
RNF11-201ENST00000242719 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
RNF11-201ENST00000242719 FGD6Q6ZV73 1430 aa21.32■■□□□ 1
RNF11-201ENST00000242719 B4GALNT3Q6L9W6 998 aa21.31■■□□□ 1
RNF11-201ENST00000242719 MAP3K1Q13233 1512 aa21.3■■□□□ 1
RNF11-201ENST00000242719 WASHC2AQ641Q2 1341 aa21.3■■□□□ 1
RNF11-201ENST00000242719 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
RNF11-201ENST00000242719 DEKP35659 375 aaKnown RBP21.27■■□□□ 1
RNF11-201ENST00000242719 NBR1Q14596 966 aa21.26■□□□□ 0.99
RNF11-201ENST00000242719 MRS2Q9HD23 443 aa21.26■□□□□ 0.99
RNF11-201ENST00000242719 ERCC6Q03468 1493 aa21.25■□□□□ 0.99
RNF11-201ENST00000242719 CFAP43Q8NDM7 1665 aa21.23■□□□□ 0.99
RNF11-201ENST00000242719 CASKIN1Q8WXD9 1431 aa21.23■□□□□ 0.99
RNF11-201ENST00000242719 EIF4G2P78344 907 aaKnown RBP eCLIP21.23■□□□□ 0.99
RNF11-201ENST00000242719 UACAQ9BZF9 1416 aa21.22■□□□□ 0.99
RNF11-201ENST00000242719 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
RNF11-201ENST00000242719 C11orf95C9JLR9 678 aaPredicted RBP21.21■□□□□ 0.99
RNF11-201ENST00000242719 ZNF326Q5BKZ1 582 aaKnown RBP21.21■□□□□ 0.99
RNF11-201ENST00000242719 FYCO1Q9BQS8 1478 aa21.21■□□□□ 0.99
RNF11-201ENST00000242719 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
RNF11-201ENST00000242719 L3MBTL2Q969R5 705 aa21.19■□□□□ 0.98
RNF11-201ENST00000242719 NAIPQ13075 1403 aa21.19■□□□□ 0.98
RNF11-201ENST00000242719 PPP4R2Q9NY27 417 aa21.17■□□□□ 0.98
RNF11-201ENST00000242719 HFM1A2PYH4 1435 aa21.17■□□□□ 0.98
RNF11-201ENST00000242719 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
RNF11-201ENST00000242719 NCOA2Q15596 1464 aa21.15■□□□□ 0.98
RNF11-201ENST00000242719 FMN1Q68DA7 1419 aa21.15■□□□□ 0.98
RNF11-201ENST00000242719 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
RNF11-201ENST00000242719 PTPN23Q9H3S7 1636 aa21.14■□□□□ 0.97
RNF11-201ENST00000242719 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
RNF11-201ENST00000242719 MPHOSPH9Q99550 1183 aa21.11■□□□□ 0.97
RNF11-201ENST00000242719 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
RNF11-201ENST00000242719 MYOM3Q5VTT5 1437 aa21.1■□□□□ 0.97
RNF11-201ENST00000242719 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
RNF11-201ENST00000242719 NOP58Q9Y2X3 529 aaKnown RBP21.07■□□□□ 0.96
RNF11-201ENST00000242719 NBPF8Q3BBV2 869 aa21.06■□□□□ 0.96
RNF11-201ENST00000242719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.06■□□□□ 0.96
RNF11-201ENST00000242719 PRKCSHP14314 528 aaPredicted RBP21.05■□□□□ 0.96
RNF11-201ENST00000242719 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
RNF11-201ENST00000242719 EFCAB5A4FU69 1503 aa21.04■□□□□ 0.96
RNF11-201ENST00000242719 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
RNF11-201ENST00000242719 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
RNF11-201ENST00000242719 CNTLNQ9NXG0 1405 aa21.01■□□□□ 0.95
RNF11-201ENST00000242719 FBLN2P98095 1184 aa21.01■□□□□ 0.95
RNF11-201ENST00000242719 CCDC7Q96M83 1385 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms