RNA–Protein interactions for RNA: ENST00000242059.9

SCRN1-201, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN1, Length 5,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-201ENST00000242059 CDCA8Q53HL2 280 aa12.96□□□□□ -0.34
SCRN1-201ENST00000242059 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
SCRN1-201ENST00000242059 MLECQ14165 292 aa12.94□□□□□ -0.34
SCRN1-201ENST00000242059 MYO15BQ96JP2 1530 aa12.94□□□□□ -0.34
SCRN1-201ENST00000242059 POGKQ9P215 609 aa12.93□□□□□ -0.34
SCRN1-201ENST00000242059 EIF4G2P78344 907 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCRN1-201ENST00000242059 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCRN1-201ENST00000242059 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
SCRN1-201ENST00000242059 ARXQ96QS3 562 aa12.9□□□□□ -0.34
SCRN1-201ENST00000242059 EEA1Q15075 1411 aa12.89□□□□□ -0.35
SCRN1-201ENST00000242059 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
SCRN1-201ENST00000242059 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
SCRN1-201ENST00000242059 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
SCRN1-201ENST00000242059 CLIP1P30622 1438 aa12.88□□□□□ -0.35
SCRN1-201ENST00000242059 TMC1Q8TDI8 760 aa12.87□□□□□ -0.35
SCRN1-201ENST00000242059 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
SCRN1-201ENST00000242059 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.86□□□□□ -0.35
SCRN1-201ENST00000242059 MYH16Q9H6N6 1097 aa12.85□□□□□ -0.35
SCRN1-201ENST00000242059 EID1Q9Y6B2 187 aa12.82□□□□□ -0.36
SCRN1-201ENST00000242059 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
SCRN1-201ENST00000242059 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
SCRN1-201ENST00000242059 SENP3Q9H4L4 574 aaPredicted RBP12.81□□□□□ -0.36
SCRN1-201ENST00000242059 TMX4Q9H1E5 349 aaPredicted RBP12.81□□□□□ -0.36
SCRN1-201ENST00000242059 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
SCRN1-201ENST00000242059 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
SCRN1-201ENST00000242059 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
SCRN1-201ENST00000242059 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
SCRN1-201ENST00000242059 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
SCRN1-201ENST00000242059 RRP7BPQ9NSQ0 103 aa12.77□□□□□ -0.36
SCRN1-201ENST00000242059 NUDCQ9Y266 331 aa12.77□□□□□ -0.36
SCRN1-201ENST00000242059 FOXD1Q16676 465 aa12.77□□□□□ -0.37
SCRN1-201ENST00000242059 CCDC9Q9Y3X0 531 aaKnown RBP12.77□□□□□ -0.37
SCRN1-201ENST00000242059 RGL3Q3MIN7 710 aa12.76□□□□□ -0.37
SCRN1-201ENST00000242059 SMARCA2P51531 1590 aa12.76□□□□□ -0.37
SCRN1-201ENST00000242059 GGT6Q6P531 493 aa12.75□□□□□ -0.37
SCRN1-201ENST00000242059 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
SCRN1-201ENST00000242059 PNNQ9H307 717 aaKnown RBP12.74□□□□□ -0.37
SCRN1-201ENST00000242059 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
SCRN1-201ENST00000242059 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
SCRN1-201ENST00000242059 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
SCRN1-201ENST00000242059 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.37
SCRN1-201ENST00000242059 GOLGA3Q08378 1498 aa12.71□□□□□ -0.37
SCRN1-201ENST00000242059 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
SCRN1-201ENST00000242059 GOLGA2Q08379 1002 aa12.7□□□□□ -0.38
SCRN1-201ENST00000242059 KNSTRNQ9Y448 316 aa12.7□□□□□ -0.38
SCRN1-201ENST00000242059 CARMIL1Q5VZK9 1371 aa12.7□□□□□ -0.38
SCRN1-201ENST00000242059 CSB-PGBD3P0DP91 1061 aa12.69□□□□□ -0.38
SCRN1-201ENST00000242059 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
SCRN1-201ENST00000242059 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
SCRN1-201ENST00000242059 CUX2O14529 1486 aa12.68□□□□□ -0.38
SCRN1-201ENST00000242059 SOGA1O94964 1423 aa12.68□□□□□ -0.38
SCRN1-201ENST00000242059 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
SCRN1-201ENST00000242059 CHMP4AQ9BY43 222 aa12.66□□□□□ -0.38
SCRN1-201ENST00000242059 MEX3CQ5U5Q3 659 aaKnown RBP12.65□□□□□ -0.38
SCRN1-201ENST00000242059 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
SCRN1-201ENST00000242059 CHMP4BQ9H444 224 aaKnown RBP12.63□□□□□ -0.39
SCRN1-201ENST00000242059 DNAJC5BQ9UF47 199 aa12.63□□□□□ -0.39
SCRN1-201ENST00000242059 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
SCRN1-201ENST00000242059 HDGFL2Q7Z4V5 671 aaPredicted RBP12.62□□□□□ -0.39
SCRN1-201ENST00000242059 ANP32BQ92688 251 aaKnown RBP12.62□□□□□ -0.39
SCRN1-201ENST00000242059 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
SCRN1-201ENST00000242059 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
SCRN1-201ENST00000242059 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
SCRN1-201ENST00000242059 PHF23Q9BUL5 403 aaPredicted RBP12.58□□□□□ -0.4
SCRN1-201ENST00000242059 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
SCRN1-201ENST00000242059 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
SCRN1-201ENST00000242059 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
SCRN1-201ENST00000242059 JPH4Q96JJ6 628 aa12.57□□□□□ -0.4
SCRN1-201ENST00000242059 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
SCRN1-201ENST00000242059 SPAG9O60271 1321 aaKnown RBP12.56□□□□□ -0.4
SCRN1-201ENST00000242059 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
SCRN1-201ENST00000242059 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
SCRN1-201ENST00000242059 ANP32AP39687 249 aaKnown RBP12.54□□□□□ -0.4
SCRN1-201ENST00000242059 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
SCRN1-201ENST00000242059 G3V3G9 751 aa12.54□□□□□ -0.4
SCRN1-201ENST00000242059 TMF1P82094 1093 aa12.54□□□□□ -0.4
SCRN1-201ENST00000242059 FAM69CQ0P6D2 419 aa12.54□□□□□ -0.4
SCRN1-201ENST00000242059 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
SCRN1-201ENST00000242059 KIF3BO15066 747 aa12.53□□□□□ -0.4
SCRN1-201ENST00000242059 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
SCRN1-201ENST00000242059 CEP162Q5TB80 1403 aa12.53□□□□□ -0.4
SCRN1-201ENST00000242059 MS4A1P11836 297 aa12.52□□□□□ -0.41
SCRN1-201ENST00000242059 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.41
SCRN1-201ENST00000242059 OS9Q13438 667 aaPredicted RBP12.52□□□□□ -0.41
SCRN1-201ENST00000242059 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
SCRN1-201ENST00000242059 CCDC88BA6NC98 1476 aa12.51□□□□□ -0.41
SCRN1-201ENST00000242059 SOX12O15370 315 aa12.51□□□□□ -0.41
SCRN1-201ENST00000242059 STK26Q9P289 416 aa12.51□□□□□ -0.41
SCRN1-201ENST00000242059 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
SCRN1-201ENST00000242059 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
SCRN1-201ENST00000242059 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
SCRN1-201ENST00000242059 PTPRGP23470 1445 aa12.49□□□□□ -0.41
SCRN1-201ENST00000242059 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
SCRN1-201ENST00000242059 EVA1CP58658 441 aa12.48□□□□□ -0.41
SCRN1-201ENST00000242059 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
SCRN1-201ENST00000242059 SF3B2Q13435 895 aaKnown RBP12.47□□□□□ -0.41
SCRN1-201ENST00000242059 HDAC5Q9UQL6 1122 aa12.47□□□□□ -0.41
SCRN1-201ENST00000242059 FTSJ3Q8IY81 847 aaKnown RBP12.47□□□□□ -0.41
SCRN1-201ENST00000242059 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.41
SCRN1-201ENST00000242059 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms